CA2326341A1 - Pharmacophore recombination for the identification of small molecule drug lead compounds - Google Patents
Pharmacophore recombination for the identification of small molecule drug lead compoundsInfo
- Publication number
- CA2326341A1 CA2326341A1 CA002326341A CA2326341A CA2326341A1 CA 2326341 A1 CA2326341 A1 CA 2326341A1 CA 002326341 A CA002326341 A CA 002326341A CA 2326341 A CA2326341 A CA 2326341A CA 2326341 A1 CA2326341 A1 CA 2326341A1
- Authority
- CA
- Canada
- Prior art keywords
- identification
- small molecule
- lead compounds
- molecule drug
- drug lead
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B30/00—Methods of screening libraries
- C40B30/04—Methods of screening libraries by measuring the ability to specifically bind a target molecule, e.g. antibody-antigen binding, receptor-ligand binding
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/531—Production of immunochemical test materials
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6845—Methods of identifying protein-protein interactions in protein mixtures
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2500/00—Screening for compounds of potential therapeutic value
- G01N2500/04—Screening involving studying the effect of compounds C directly on molecule A (e.g. C are potential ligands for a receptor A, or potential substrates for an enzyme A)
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
- Y10S—TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y10S530/00—Chemistry: natural resins or derivatives; peptides or proteins; lignins or reaction products thereof
- Y10S530/807—Hapten conjugated with peptide or protein
Abstract
The disclosure is directed to methods of identifying drug leads or binding compounds which have affinity for a target molecule by cross-linking members of a library of potential target binding molecules and screening the crosslinked complexes.
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US09/049,754 US6344330B1 (en) | 1998-03-27 | 1998-03-27 | Pharmacophore recombination for the identification of small molecule drug lead compounds |
US09/049,754 | 1998-03-27 | ||
PCT/US1999/006734 WO1999049314A1 (en) | 1998-03-27 | 1999-03-26 | Pharmacophore recombination for the identification of small molecule drug lead compounds |
Publications (2)
Publication Number | Publication Date |
---|---|
CA2326341A1 true CA2326341A1 (en) | 1999-09-30 |
CA2326341C CA2326341C (en) | 2009-02-17 |
Family
ID=21961533
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CA002326341A Expired - Fee Related CA2326341C (en) | 1998-03-27 | 1999-03-26 | Pharmacophore recombination for the identification of small molecule drug lead compounds |
Country Status (9)
Country | Link |
---|---|
US (5) | US6344330B1 (en) |
EP (1) | EP1066522B1 (en) |
JP (1) | JP2002507748A (en) |
AT (1) | ATE342507T1 (en) |
AU (1) | AU759327B2 (en) |
CA (1) | CA2326341C (en) |
DE (1) | DE69933549T2 (en) |
IL (1) | IL138717A0 (en) |
WO (1) | WO1999049314A1 (en) |
Families Citing this family (41)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US6344330B1 (en) * | 1998-03-27 | 2002-02-05 | The Regents Of The University Of California | Pharmacophore recombination for the identification of small molecule drug lead compounds |
US6998233B2 (en) | 1998-06-26 | 2006-02-14 | Sunesis Pharmaceuticals, Inc. | Methods for ligand discovery |
US6919178B2 (en) | 2000-11-21 | 2005-07-19 | Sunesis Pharmaceuticals, Inc. | Extended tethering approach for rapid identification of ligands |
US20030194745A1 (en) * | 1998-06-26 | 2003-10-16 | Mcdowell Robert S. | Cysteine mutants and methods for detecting ligand binding to biological molecules |
US20050287596A9 (en) * | 1998-06-26 | 2005-12-29 | Braisted Andrew C | Novel ligands and libraries of ligands |
US6824987B1 (en) * | 1999-05-11 | 2004-11-30 | President And Fellows Of Harvard College | Small molecule printing |
CA2430234C (en) * | 2000-11-21 | 2008-02-12 | Sunesis Pharmaceuticals, Inc. | An extended tethering approach for rapid identification of ligands |
US20020172967A1 (en) * | 2001-02-13 | 2002-11-21 | Gadek Thomas R. | Identification of non-covalent complexes by mass spectrometry |
US9157875B2 (en) * | 2001-05-16 | 2015-10-13 | Benjamin P. Warner | Drug development and manufacturing |
US20040017884A1 (en) * | 2002-07-25 | 2004-01-29 | Havrilla George J. | Flow method and apparatus for screening chemicals using micro x-ray fluorescence |
US6858148B2 (en) * | 2003-07-16 | 2005-02-22 | The Regents Of The University Of California | Method and apparatus for detecting chemical binding |
EP1421063A1 (en) * | 2001-08-07 | 2004-05-26 | Sunesis Pharmaceuticals, Inc. | Disulfide and thiosulfonate ligands and libraries comprising these ligands |
JP4391237B2 (en) * | 2001-11-21 | 2009-12-24 | サネシス ファーマシューティカルズ, インコーポレイテッド | Methods for ligand discovery |
BRPI0215858B1 (en) | 2002-07-24 | 2020-11-10 | Keddem Bio-Science Ltd | method for obtaining information about a chemically active area of a target molecule |
US7519145B2 (en) * | 2002-07-25 | 2009-04-14 | Los Alamos National Security, Llc | Flow method and apparatus for screening chemicals using micro x-ray fluorescence |
US7491312B2 (en) * | 2002-10-30 | 2009-02-17 | Edison Pharmaceuticals, Inc. | Identifying therapeutic compounds based on their physical-chemical properties |
DE60311879T2 (en) | 2002-12-23 | 2007-12-20 | Astex Therapeutics Ltd., Cambridge | Synthesis and screening of ligands by X-ray crystallography |
US7736909B2 (en) * | 2003-01-09 | 2010-06-15 | Board Of Regents, The University Of Texas System | Methods and compositions comprising capture agents |
CA2521766A1 (en) * | 2003-04-11 | 2004-10-28 | Sgx Pharmaceuticals, Inc. | Compound libraries and methods for drug discovery |
US20070003954A1 (en) * | 2005-05-12 | 2007-01-04 | The Board Of Regents Of The University Of Texas System | Protein and antibody profiling using small molecule microarrays |
ES2400509T3 (en) * | 2005-10-04 | 2013-04-10 | Alchemia Ltd | Drug Design Method |
AU2007277445A1 (en) * | 2006-01-03 | 2008-01-31 | Dana-Farber Cancer Institute | Small molecule printing |
WO2008127291A2 (en) | 2006-10-10 | 2008-10-23 | Los Alamos National Security, Llc | Advanced drug development and manufacturing |
DE102007023102A1 (en) * | 2006-12-19 | 2008-06-26 | Bayer Cropscience Ag | Bisoximes as fungicides |
US20090087919A1 (en) | 2007-09-28 | 2009-04-02 | Caldera Pharmaceuticals, Inc. | Method and Apparatus for Measuring Protein Post-Translational Modification |
EP2257637B1 (en) * | 2008-03-25 | 2015-09-23 | Sunesis Pharmaceuticals, Inc. | Methods of chemotype evolution |
CN102449481B (en) * | 2009-05-29 | 2016-05-25 | 德克萨斯大学系统董事会 | For separating of with the class peptide part of processing autoimmune T cell |
AU2010256880B2 (en) * | 2009-06-02 | 2015-01-22 | Opko Health, Inc. | Identification of small molecules recognized by antibodies in subjects with neurodegenerative diseases |
WO2011047257A1 (en) * | 2009-10-16 | 2011-04-21 | The Board Of Regents Of The University Of Texas System | Compositions and methods for producing cyclic peptoid libraries |
WO2012001040A1 (en) | 2010-07-02 | 2012-01-05 | Syngenta Participations Ag | Novel microbiocidal dioxime ether derivatives |
TW201211005A (en) | 2010-07-29 | 2012-03-16 | Syngenta Participations Ag | Novel microbiocidal dioxime ether derivatives |
EP2688911B1 (en) | 2011-03-24 | 2017-08-02 | OPKO Pharmaceuticals, LLC | Biomarker discovery in complex biological fluid using bead or particle based libraries |
CN103930126A (en) | 2011-08-12 | 2014-07-16 | Bsrc亚历山大.弗莱明 | TNF superfamily trimerization inhibitors |
WO2013092460A1 (en) | 2011-12-20 | 2013-06-27 | Syngenta Participations Ag | Cyclic bisoxime microbicides |
CN102731450A (en) * | 2012-07-04 | 2012-10-17 | 中山大学 | Preparation method of benzofuran or indole |
US10782295B2 (en) | 2013-08-13 | 2020-09-22 | The Scripps Research Institute | Cysteine-reactive ligand discovery in proteomes |
CN104897826B (en) * | 2015-06-16 | 2016-06-22 | 广西师范大学 | A kind of method detecting micromolecular compound and target protein interaction for cell in-situ |
US10493127B2 (en) | 2015-08-11 | 2019-12-03 | Arch Biopartners, Inc. | DPEP-1 binding compositions and methods of use |
US10670605B2 (en) | 2015-10-22 | 2020-06-02 | The Scripps Research Institute | Cysteine reactive probes and uses thereof |
CN109641935A (en) | 2016-03-25 | 2019-04-16 | 莫拉利达尔·瑞迪·穆拉 | Combinatorial compound and biomarker exploitation |
US11535597B2 (en) | 2017-01-18 | 2022-12-27 | The Scripps Research Institute | Photoreactive ligands and uses thereof |
Family Cites Families (21)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US4727022A (en) | 1984-03-14 | 1988-02-23 | Syntex (U.S.A.) Inc. | Methods for modulating ligand-receptor interactions and their application |
DK337086A (en) * | 1985-08-12 | 1987-02-13 | Hoffmann La Roche | benzimidazole |
US5196351A (en) | 1987-09-30 | 1993-03-23 | Beckman Instruments, Inc. | Bidentate conjugate and method of use thereof |
FR2651229B1 (en) * | 1989-08-24 | 1991-12-13 | Inst Nat Sante Rech Med | NOVEL AMINO ACID DERIVATIVES, THEIR PREPARATION PROCESS AND THEIR THERAPEUTIC APPLICATION. |
US5683867A (en) | 1990-06-11 | 1997-11-04 | Nexstar Pharmaceuticals, Inc. | Systematic evolution of ligands by exponential enrichment: blended SELEX |
DE69233750D1 (en) | 1991-04-10 | 2009-01-02 | Scripps Research Inst | Libraries of heterodimeric receptors using phagemids |
WO1993002093A1 (en) * | 1991-07-15 | 1993-02-04 | La Jolla Pharmaceutical Company | Modified phosphorous intermediates for providing functional groups on the 5' end of oligonucleotides |
US5543507A (en) | 1992-03-05 | 1996-08-06 | Isis Pharmaceuticals, Inc. | Covalently cross-linked oligonucleotides |
EP0635023B1 (en) | 1992-03-05 | 2002-02-06 | Isis Pharmaceuticals, Inc. | Covalently cross-linked oligonucleotides |
US5362859A (en) | 1992-07-27 | 1994-11-08 | Sepracor, Inc. | High-capacity affinity supports and methods for the preparation and use of same |
US5512435A (en) | 1993-02-05 | 1996-04-30 | Renschler; Markus F. | Receptor-binding antiproliferative peptides |
JP3615552B2 (en) * | 1995-04-20 | 2005-02-02 | タノックス, インコーポレイテッド | Method for screening therapeutic agent using novel apoptosis-regulating protein |
DE19521019A1 (en) * | 1995-06-13 | 1996-12-19 | Boehringer Mannheim Gmbh | Method and means for the simultaneous colorimetric and electrochemical measurement of an analyte |
WO1997018469A2 (en) | 1995-11-14 | 1997-05-22 | Abbott Laboratories | Use of nuclear magnetic resonance to design ligands to target biomolecules |
US5698401A (en) | 1995-11-14 | 1997-12-16 | Abbott Laboratories | Use of nuclear magnetic resonance to identify ligands to target biomolecules |
WO1998011436A1 (en) | 1996-09-13 | 1998-03-19 | Whitehead Institute For Biomedical Research | Non-specific affinity enhancement to identify combinatorial library members |
US6552060B1 (en) * | 1997-08-11 | 2003-04-22 | Prolx Pharmaceuticals, Inc. | Asymmetric disulfides and methods of using same |
US6043024A (en) | 1997-04-18 | 2000-03-28 | Abbott Laboratories | Use of one-dimensional nuclear magnetic resonance to identify ligands to target biomolecules |
US6344330B1 (en) * | 1998-03-27 | 2002-02-05 | The Regents Of The University Of California | Pharmacophore recombination for the identification of small molecule drug lead compounds |
US6335155B1 (en) * | 1998-06-26 | 2002-01-01 | Sunesis Pharmaceuticals, Inc. | Methods for rapidly identifying small organic molecule ligands for binding to biological target molecules |
US7135288B2 (en) * | 2002-09-27 | 2006-11-14 | Ut-Battelle, Llc | Combinatorial synthesis of ceramic materials |
-
1998
- 1998-03-27 US US09/049,754 patent/US6344330B1/en not_active Expired - Lifetime
-
1999
- 1999-03-26 DE DE69933549T patent/DE69933549T2/en not_active Expired - Lifetime
- 1999-03-26 AU AU32113/99A patent/AU759327B2/en not_active Ceased
- 1999-03-26 CA CA002326341A patent/CA2326341C/en not_active Expired - Fee Related
- 1999-03-26 AT AT99914218T patent/ATE342507T1/en not_active IP Right Cessation
- 1999-03-26 EP EP99914218A patent/EP1066522B1/en not_active Expired - Lifetime
- 1999-03-26 IL IL13871799A patent/IL138717A0/en not_active IP Right Cessation
- 1999-03-26 WO PCT/US1999/006734 patent/WO1999049314A1/en active IP Right Grant
- 1999-03-26 JP JP2000538233A patent/JP2002507748A/en active Pending
- 1999-03-26 US US09/277,461 patent/US6344334B1/en not_active Expired - Lifetime
-
2001
- 2001-12-28 US US10/029,304 patent/US20020115107A1/en not_active Abandoned
-
2003
- 2003-09-26 US US10/670,507 patent/US20040063157A1/en not_active Abandoned
- 2003-09-26 US US10/670,607 patent/US7001727B2/en not_active Expired - Fee Related
Also Published As
Publication number | Publication date |
---|---|
US20040063157A1 (en) | 2004-04-01 |
AU759327B2 (en) | 2003-04-10 |
US7001727B2 (en) | 2006-02-21 |
WO1999049314A9 (en) | 1999-11-18 |
EP1066522A1 (en) | 2001-01-10 |
US20040132100A1 (en) | 2004-07-08 |
DE69933549D1 (en) | 2006-11-23 |
WO1999049314A1 (en) | 1999-09-30 |
EP1066522B1 (en) | 2006-10-11 |
US6344334B1 (en) | 2002-02-05 |
JP2002507748A (en) | 2002-03-12 |
IL138717A0 (en) | 2001-10-31 |
US20020115107A1 (en) | 2002-08-22 |
AU3211399A (en) | 1999-10-18 |
DE69933549T2 (en) | 2007-06-21 |
ATE342507T1 (en) | 2006-11-15 |
EP1066522A4 (en) | 2005-02-02 |
CA2326341C (en) | 2009-02-17 |
US6344330B1 (en) | 2002-02-05 |
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Legal Events
Date | Code | Title | Description |
---|---|---|---|
EEER | Examination request | ||
MKLA | Lapsed |