DE60139200D1 - Nachweis von rna - Google Patents
Nachweis von rnaInfo
- Publication number
- DE60139200D1 DE60139200D1 DE60139200T DE60139200T DE60139200D1 DE 60139200 D1 DE60139200 D1 DE 60139200D1 DE 60139200 T DE60139200 T DE 60139200T DE 60139200 T DE60139200 T DE 60139200T DE 60139200 D1 DE60139200 D1 DE 60139200D1
- Authority
- DE
- Germany
- Prior art keywords
- nucleic acid
- acid sequences
- cleavage
- detection
- polymerases
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Expired - Lifetime
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6816—Hybridisation assays characterised by the detection means
- C12Q1/6823—Release of bound markers
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/10—Transferases (2.)
- C12N9/12—Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
- C12N9/1241—Nucleotidyltransferases (2.7.7)
- C12N9/1252—DNA-directed DNA polymerase (2.7.7.7), i.e. DNA replicase
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
- C12N9/22—Ribonucleases RNAses, DNAses
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
- C12Q1/683—Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
- Y10T—TECHNICAL SUBJECTS COVERED BY FORMER US CLASSIFICATION
- Y10T436/00—Chemistry: analytical and immunological testing
- Y10T436/14—Heterocyclic carbon compound [i.e., O, S, N, Se, Te, as only ring hetero atom]
- Y10T436/142222—Hetero-O [e.g., ascorbic acid, etc.]
- Y10T436/143333—Saccharide [e.g., DNA, etc.]
Applications Claiming Priority (5)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US09/577,304 US6759226B1 (en) | 2000-05-24 | 2000-05-24 | Enzymes for the detection of specific nucleic acid sequences |
US09/758,282 US6635463B2 (en) | 2000-05-24 | 2001-01-11 | Enzymes for the detection of nucleic acid sequences |
US09/864,636 US7045289B2 (en) | 1991-09-09 | 2001-05-24 | Detection of RNA Sequences |
US09/864,426 US20040018489A1 (en) | 1991-09-09 | 2001-05-24 | Detection of RNA |
PCT/US2001/017086 WO2001090337A2 (en) | 2000-05-24 | 2001-05-24 | Detection of rna |
Publications (1)
Publication Number | Publication Date |
---|---|
DE60139200D1 true DE60139200D1 (de) | 2009-08-20 |
Family
ID=24308153
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
DE60139200T Expired - Lifetime DE60139200D1 (de) | 2000-05-24 | 2001-05-24 | Nachweis von rna |
Country Status (3)
Country | Link |
---|---|
US (5) | US6759226B1 (de) |
AT (1) | ATE435909T1 (de) |
DE (1) | DE60139200D1 (de) |
Families Citing this family (83)
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US7118860B2 (en) * | 1999-10-29 | 2006-10-10 | Stratagene California | Methods for detection of a target nucleic acid by capture |
JP4310599B2 (ja) * | 2000-07-05 | 2009-08-12 | 東洋紡績株式会社 | 塩基多型を検出する方法 |
US7309573B2 (en) * | 2000-11-21 | 2007-12-18 | Stratagene California | Methods for detection of a nucleic acid by sequential amplification |
US7678541B2 (en) * | 2000-11-21 | 2010-03-16 | Hologic, Inc. | Methods and compositions for the detection of a nucleic acid using a non-invasive cleavage reaction |
CA2460546A1 (en) * | 2001-09-14 | 2003-03-27 | Invitrogen Corporation | Dna polymerases and mutants thereof |
AU2002366438A1 (en) * | 2001-09-14 | 2003-09-02 | Applera Corporation | Thermus scotoductus nucleic acid polymerases |
US20050042629A1 (en) * | 2002-09-13 | 2005-02-24 | Applera Corporation | Thermus scotoductus nucleic acid polymerases |
WO2003048308A2 (en) | 2001-11-30 | 2003-06-12 | Applera Corporation | Thermus brockianus nucleic acid polymerases |
GB0205455D0 (en) * | 2002-03-07 | 2002-04-24 | Molecular Sensing Plc | Nucleic acid probes, their synthesis and use |
US7700750B2 (en) * | 2003-01-09 | 2010-04-20 | Third Wave Technologies, Inc. | Connexin allele detection assays |
US20050053990A1 (en) * | 2003-09-08 | 2005-03-10 | Roberts Richard J. | Cleavage of RNA by restriction endonucleases |
EP1685246A2 (de) * | 2003-11-03 | 2006-08-02 | Medical Research Council | Polymerase |
GB0325653D0 (en) * | 2003-11-03 | 2003-12-10 | Medical Res Council | CST emulsions |
US20060029954A1 (en) * | 2004-06-30 | 2006-02-09 | Applera Corporation | Compositions and methods for identifying nucleotides in polynucleotide sequences |
US7109297B2 (en) * | 2004-09-13 | 2006-09-19 | The Hong Kong Polytechnic University | Biomarkers for toxic algae |
US7772390B1 (en) | 2006-07-18 | 2010-08-10 | The Regents Of The University Of California | Lipid mediated nucleic acid synthesis |
US20090075259A1 (en) * | 2007-08-31 | 2009-03-19 | Carsten-Peter Carstens | Analyte detection via antibody-associated enzyme assay |
KR101419980B1 (ko) | 2008-03-15 | 2014-07-15 | 홀로직, 인크. | 증폭 반응 도중에 핵산 분자를 분석하기 위한 조성물 및 방법 |
US20110136118A1 (en) * | 2008-06-17 | 2011-06-09 | Sigma-Aldrich Co. | Real time polymerase chain reaction process using a universal detection system |
CN102245761A (zh) | 2008-11-03 | 2011-11-16 | 卡帕生物系统 | 修饰a型dna聚合酶 |
WO2011014885A1 (en) * | 2009-07-31 | 2011-02-03 | Agilent Technologies, Inc. | Thermostable type-a dna polymerase mutants with increased polymerization rate and resistance to inhibitors |
US10787701B2 (en) | 2010-04-05 | 2020-09-29 | Prognosys Biosciences, Inc. | Spatially encoded biological assays |
US20190300945A1 (en) | 2010-04-05 | 2019-10-03 | Prognosys Biosciences, Inc. | Spatially Encoded Biological Assays |
US8361720B2 (en) | 2010-11-15 | 2013-01-29 | Exact Sciences Corporation | Real time cleavage assay |
US8916344B2 (en) | 2010-11-15 | 2014-12-23 | Exact Sciences Corporation | Methylation assay |
US8715937B2 (en) | 2010-11-15 | 2014-05-06 | Exact Sciences Corporation | Mutation detection assay |
US9315787B2 (en) | 2011-01-14 | 2016-04-19 | Kapa Biosystems, Inc. | Modified DNA polymerases for improved amplification |
GB201106254D0 (en) | 2011-04-13 | 2011-05-25 | Frisen Jonas | Method and product |
WO2014158628A1 (en) | 2013-03-14 | 2014-10-02 | Hologic, Inc. | Compositions and methods for analysis of nucleic acid molecules |
CN111662960B (zh) | 2013-06-25 | 2024-04-12 | 普罗格诺西斯生物科学公司 | 采用微流控装置的空间编码生物分析 |
ES2943498T3 (es) | 2013-08-05 | 2023-06-13 | Twist Bioscience Corp | Genotecas sintetizadas de novo |
JP6267217B2 (ja) * | 2013-09-30 | 2018-01-24 | Necソリューションイノベータ株式会社 | ターゲットの分析方法および分析キット |
CN113215219A (zh) * | 2014-02-13 | 2021-08-06 | 宝生物工程(美国) 有限公司 | 从核酸的初始集合中耗尽靶分子的方法、以及用于实践其的组合物和试剂盒 |
WO2016126882A1 (en) | 2015-02-04 | 2016-08-11 | Twist Bioscience Corporation | Methods and devices for de novo oligonucleic acid assembly |
DK3901281T3 (da) | 2015-04-10 | 2023-01-23 | Spatial Transcriptomics Ab | Rumligt adskilt, multipleks nukleinsyreanalyse af biologiske prøver |
US9981239B2 (en) | 2015-04-21 | 2018-05-29 | Twist Bioscience Corporation | Devices and methods for oligonucleic acid library synthesis |
GB2557529A (en) | 2015-09-18 | 2018-06-20 | Twist Bioscience Corp | Oligonucleic acid variant libraries and synthesis thereof |
WO2017053450A1 (en) | 2015-09-22 | 2017-03-30 | Twist Bioscience Corporation | Flexible substrates for nucleic acid synthesis |
WO2017095958A1 (en) | 2015-12-01 | 2017-06-08 | Twist Bioscience Corporation | Functionalized surfaces and preparation thereof |
CN109996876A (zh) | 2016-08-22 | 2019-07-09 | 特韦斯特生物科学公司 | 从头合成的核酸文库 |
WO2018057526A2 (en) | 2016-09-21 | 2018-03-29 | Twist Bioscience Corporation | Nucleic acid based data storage |
CN110023493A (zh) * | 2016-11-22 | 2019-07-16 | 东洋纺株式会社 | 经改变的耐热性dna聚合酶 |
AU2017378492B2 (en) | 2016-12-16 | 2022-06-16 | Twist Bioscience Corporation | Variant libraries of the immunological synapse and synthesis thereof |
US11550939B2 (en) | 2017-02-22 | 2023-01-10 | Twist Bioscience Corporation | Nucleic acid based data storage using enzymatic bioencryption |
CA3056388A1 (en) | 2017-03-15 | 2018-09-20 | Twist Bioscience Corporation | Variant libraries of the immunological synapse and synthesis thereof |
WO2018231864A1 (en) | 2017-06-12 | 2018-12-20 | Twist Bioscience Corporation | Methods for seamless nucleic acid assembly |
WO2018231872A1 (en) | 2017-06-12 | 2018-12-20 | Twist Bioscience Corporation | Methods for seamless nucleic acid assembly |
SG11202002194UA (en) | 2017-09-11 | 2020-04-29 | Twist Bioscience Corp | Gpcr binding proteins and synthesis thereof |
KR20240024357A (ko) | 2017-10-20 | 2024-02-23 | 트위스트 바이오사이언스 코포레이션 | 폴리뉴클레오타이드 합성을 위한 가열된 나노웰 |
KR20200106067A (ko) | 2018-01-04 | 2020-09-10 | 트위스트 바이오사이언스 코포레이션 | Dna 기반 디지털 정보 저장 |
US10961518B2 (en) * | 2018-01-19 | 2021-03-30 | Bio-Rad Laboratories, Inc. | Mutant DNA polymerases |
EP3814497A4 (de) | 2018-05-18 | 2022-03-02 | Twist Bioscience Corporation | Polynukleotide, reagenzien und verfahren zur nukleinsäurehybridisierung |
US11519033B2 (en) | 2018-08-28 | 2022-12-06 | 10X Genomics, Inc. | Method for transposase-mediated spatial tagging and analyzing genomic DNA in a biological sample |
WO2020123320A2 (en) | 2018-12-10 | 2020-06-18 | 10X Genomics, Inc. | Imaging system hardware |
US11926867B2 (en) | 2019-01-06 | 2024-03-12 | 10X Genomics, Inc. | Generating capture probes for spatial analysis |
US11649485B2 (en) | 2019-01-06 | 2023-05-16 | 10X Genomics, Inc. | Generating capture probes for spatial analysis |
CA3131689A1 (en) | 2019-02-26 | 2020-09-03 | Twist Bioscience Corporation | Variant nucleic acid libraries for glp1 receptor |
CN113785057A (zh) | 2019-02-26 | 2021-12-10 | 特韦斯特生物科学公司 | 用于抗体优化的变异核酸文库 |
US11613738B2 (en) | 2019-05-14 | 2023-03-28 | Abclonal Science, Inc. | Mutant Taq polymerase resistant to inhibition of amplification in the presence of cyanine dye |
WO2020243579A1 (en) | 2019-05-30 | 2020-12-03 | 10X Genomics, Inc. | Methods of detecting spatial heterogeneity of a biological sample |
AU2020298294A1 (en) | 2019-06-21 | 2022-02-17 | Twist Bioscience Corporation | Barcode-based nucleic acid sequence assembly |
EP4025711A2 (de) | 2019-11-08 | 2022-07-13 | 10X Genomics, Inc. | Erhöhung der spezifität einer analytbindung |
ES2946357T3 (es) | 2019-12-23 | 2023-07-17 | 10X Genomics Inc | Métodos para el análisis espacial usando ligación con molde de ARN |
US11702693B2 (en) | 2020-01-21 | 2023-07-18 | 10X Genomics, Inc. | Methods for printing cells and generating arrays of barcoded cells |
US11732299B2 (en) | 2020-01-21 | 2023-08-22 | 10X Genomics, Inc. | Spatial assays with perturbed cells |
US11898205B2 (en) | 2020-02-03 | 2024-02-13 | 10X Genomics, Inc. | Increasing capture efficiency of spatial assays |
US11732300B2 (en) | 2020-02-05 | 2023-08-22 | 10X Genomics, Inc. | Increasing efficiency of spatial analysis in a biological sample |
US11891654B2 (en) | 2020-02-24 | 2024-02-06 | 10X Genomics, Inc. | Methods of making gene expression libraries |
EP4242325A3 (de) | 2020-04-22 | 2023-10-04 | 10X Genomics, Inc. | Verfahren zur räumlichen analyse unter verwendung von gezieltem rna-abbau |
WO2021237087A1 (en) | 2020-05-22 | 2021-11-25 | 10X Genomics, Inc. | Spatial analysis to detect sequence variants |
WO2021236929A1 (en) | 2020-05-22 | 2021-11-25 | 10X Genomics, Inc. | Simultaneous spatio-temporal measurement of gene expression and cellular activity |
WO2021242834A1 (en) | 2020-05-26 | 2021-12-02 | 10X Genomics, Inc. | Method for resetting an array |
WO2021252499A1 (en) | 2020-06-08 | 2021-12-16 | 10X Genomics, Inc. | Methods of determining a surgical margin and methods of use thereof |
EP4165207A1 (de) | 2020-06-10 | 2023-04-19 | 10X Genomics, Inc. | Verfahren zur bestimmung einer position eines analyten in einer biologischen probe |
WO2021263111A1 (en) | 2020-06-25 | 2021-12-30 | 10X Genomics, Inc. | Spatial analysis of dna methylation |
US11761038B1 (en) | 2020-07-06 | 2023-09-19 | 10X Genomics, Inc. | Methods for identifying a location of an RNA in a biological sample |
US11926822B1 (en) | 2020-09-23 | 2024-03-12 | 10X Genomics, Inc. | Three-dimensional spatial analysis |
WO2022076415A1 (en) * | 2020-10-06 | 2022-04-14 | University Of Maryland, Baltimore | Rapid diagnostic electrochemical biosensing targeted with antisense oligonucleotides |
CN112301020B (zh) * | 2020-10-19 | 2024-04-12 | 复旦大学附属肿瘤医院 | Iii类脱氧核酶突变体及其制备方法与应用 |
US11827935B1 (en) | 2020-11-19 | 2023-11-28 | 10X Genomics, Inc. | Methods for spatial analysis using rolling circle amplification and detection probes |
EP4121555A1 (de) | 2020-12-21 | 2023-01-25 | 10X Genomics, Inc. | Verfahren, zusammensetzungen und systeme zur erfassung von sonden und/oder barcodes |
WO2023034489A1 (en) | 2021-09-01 | 2023-03-09 | 10X Genomics, Inc. | Methods, compositions, and kits for blocking a capture probe on a spatial array |
AU2022357542A1 (en) | 2021-09-30 | 2024-03-14 | Gen-Probe Incorporated | Temperature-selectable fret cassette signaling |
Family Cites Families (24)
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US5795762A (en) | 1986-08-22 | 1998-08-18 | Roche Molecular Systems, Inc. | 5' to 3' exonuclease mutations of thermostable DNA polymerases |
US5466591A (en) | 1986-08-22 | 1995-11-14 | Hoffmann-La Roche Inc. | 5' to 3' exonuclease mutations of thermostable DNA polymerases |
US5244797B1 (en) | 1988-01-13 | 1998-08-25 | Life Technologies Inc | Cloned genes encoding reverse transcriptase lacking rnase h activity |
US5846717A (en) | 1996-01-24 | 1998-12-08 | Third Wave Technologies, Inc. | Detection of nucleic acid sequences by invader-directed cleavage |
US7150982B2 (en) * | 1991-09-09 | 2006-12-19 | Third Wave Technologies, Inc. | RNA detection assays |
US5994069A (en) | 1996-01-24 | 1999-11-30 | Third Wave Technologies, Inc. | Detection of nucleic acids by multiple sequential invasive cleavages |
US5459055A (en) | 1991-12-27 | 1995-10-17 | Epicentre Technologies Corporation | Thermostable ribonuclease H isolated from Thermus flavus |
US5268289A (en) | 1991-12-27 | 1993-12-07 | Epicentre Technologies Corp. | Thermostable ribonuclease H |
US5614402A (en) * | 1992-12-07 | 1997-03-25 | Third Wave Technologies, Inc. | 5' nucleases derived from thermostable DNA polymerase |
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US6335160B1 (en) | 1995-02-17 | 2002-01-01 | Maxygen, Inc. | Methods and compositions for polypeptide engineering |
US5874283A (en) | 1995-05-30 | 1999-02-23 | John Joseph Harrington | Mammalian flap-specific endonuclease |
EP1634890B1 (de) | 1996-01-24 | 2008-11-19 | Third Wave Technologies, Inc. | Invasive Spaltung von Nukleinsäuren |
US5985557A (en) | 1996-01-24 | 1999-11-16 | Third Wave Technologies, Inc. | Invasive cleavage of nucleic acids |
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US5972603A (en) * | 1996-02-09 | 1999-10-26 | President And Fellows Of Harvard College | DNA polymerase with modified processivity |
CA2273204C (en) | 1996-11-29 | 2008-10-14 | Third Wave Technologies, Inc. | Fen-1 endonucleases, mixtures and cleavage methods |
CA2276064C (en) | 1997-01-17 | 2013-12-17 | Maxygen, Inc. | Evolution of whole cells and organisms by recursive sequence recombination |
US6228628B1 (en) * | 1997-07-09 | 2001-05-08 | Roche Molecular Systems | Mutant chimeric DNA polymerase |
KR20010052894A (ko) | 1998-06-17 | 2001-06-25 | 맥시겐, 인크. | 목적하는 특성을 보유한 폴리뉴클레오티드를 생성하는 방법 |
AU1199000A (en) | 1998-09-29 | 2000-04-17 | Maxygen, Inc. | Shuffling of codon altered genes |
US6659293B1 (en) | 1999-07-07 | 2003-12-09 | Odwalla, Inc. | Pull-out shelf stocking system |
JP2004521606A (ja) | 2000-05-24 | 2004-07-22 | サード・ウェーブ・テクノロジーズ・インク | Rnaの検出法 |
-
2000
- 2000-05-24 US US09/577,304 patent/US6759226B1/en not_active Expired - Lifetime
-
2001
- 2001-01-11 US US09/758,282 patent/US6635463B2/en not_active Expired - Lifetime
- 2001-05-24 AT AT01937745T patent/ATE435909T1/de not_active IP Right Cessation
- 2001-05-24 DE DE60139200T patent/DE60139200D1/de not_active Expired - Lifetime
-
2006
- 2006-12-19 US US11/642,815 patent/US7935800B2/en not_active Expired - Fee Related
-
2007
- 2007-10-30 US US11/929,404 patent/US7807806B2/en not_active Expired - Fee Related
-
2010
- 2010-10-05 US US12/898,490 patent/US8063184B2/en not_active Expired - Fee Related
Also Published As
Publication number | Publication date |
---|---|
US6635463B2 (en) | 2003-10-21 |
US7807806B2 (en) | 2010-10-05 |
US8063184B2 (en) | 2011-11-22 |
US6759226B1 (en) | 2004-07-06 |
US20090142754A1 (en) | 2009-06-04 |
US20030134349A1 (en) | 2003-07-17 |
US20080293046A1 (en) | 2008-11-27 |
US7935800B2 (en) | 2011-05-03 |
ATE435909T1 (de) | 2009-07-15 |
US20110104682A1 (en) | 2011-05-05 |
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Legal Events
Date | Code | Title | Description |
---|---|---|---|
8364 | No opposition during term of opposition |