WO1995022625A1 - Dna mutagenesis by random fragmentation and reassembly - Google Patents
Dna mutagenesis by random fragmentation and reassembly Download PDFInfo
- Publication number
- WO1995022625A1 WO1995022625A1 PCT/US1995/002126 US9502126W WO9522625A1 WO 1995022625 A1 WO1995022625 A1 WO 1995022625A1 US 9502126 W US9502126 W US 9502126W WO 9522625 A1 WO9522625 A1 WO 9522625A1
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- fragments
- stranded
- double
- sequence
- polynucleotide
- Prior art date
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- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B40/00—Libraries per se, e.g. arrays, mixtures
- C40B40/02—Libraries contained in or displayed by microorganisms, e.g. bacteria or animal cells; Libraries contained in or displayed by vectors, e.g. plasmids; Libraries containing only microorganisms or vectors
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/43504—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from invertebrates
- C07K14/43595—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from invertebrates from coelenteratae, e.g. medusae
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
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- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/52—Cytokines; Lymphokines; Interferons
- C07K14/54—Interleukins [IL]
- C07K14/545—IL-1
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
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- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/102—Mutagenizing nucleic acids
- C12N15/1027—Mutagenizing nucleic acids by DNA shuffling, e.g. RSR, STEP, RPR
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1037—Screening libraries presented on the surface of microorganisms, e.g. phage display, E. coli display
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- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
- C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
- C12N9/2468—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1) acting on beta-galactose-glycoside bonds, e.g. carrageenases (3.2.1.83; 3.2.1.157); beta-agarase (3.2.1.81)
- C12N9/2471—Beta-galactosidase (3.2.1.23), i.e. exo-(1-->4)-beta-D-galactanase
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- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/78—Hydrolases (3) acting on carbon to nitrogen bonds other than peptide bonds (3.5)
- C12N9/86—Hydrolases (3) acting on carbon to nitrogen bonds other than peptide bonds (3.5) acting on amide bonds in cyclic amides, e.g. penicillinase (3.5.2)
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- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
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- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6811—Selection methods for production or design of target specific oligonucleotides or binding molecules
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- C12Y—ENZYMES
- C12Y302/00—Hydrolases acting on glycosyl compounds, i.e. glycosylases (3.2)
- C12Y302/01—Glycosidases, i.e. enzymes hydrolysing O- and S-glycosyl compounds (3.2.1)
- C12Y302/01023—Beta-galactosidase (3.2.1.23), i.e. exo-(1-->4)-beta-D-galactanase
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- C12Y305/00—Hydrolases acting on carbon-nitrogen bonds, other than peptide bonds (3.5)
- C12Y305/02—Hydrolases acting on carbon-nitrogen bonds, other than peptide bonds (3.5) in cyclic amides (3.5.2)
- C12Y305/02006—Beta-lactamase (3.5.2.6)
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- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B40/00—Libraries per se, e.g. arrays, mixtures
- C40B40/04—Libraries containing only organic compounds
- C40B40/06—Libraries containing nucleotides or polynucleotides, or derivatives thereof
- C40B40/08—Libraries containing RNA or DNA which encodes proteins, e.g. gene libraries
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- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B50/00—Methods of creating libraries, e.g. combinatorial synthesis
- C40B50/06—Biochemical methods, e.g. using enzymes or whole viable microorganisms
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- C—CHEMISTRY; METALLURGY
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- C07K2317/00—Immunoglobulins specific features
- C07K2317/50—Immunoglobulins specific features characterized by immunoglobulin fragments
- C07K2317/56—Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
- C07K2317/565—Complementarity determining region [CDR]
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/60—Immunoglobulins specific features characterized by non-natural combinations of immunoglobulin fragments
- C07K2317/62—Immunoglobulins specific features characterized by non-natural combinations of immunoglobulin fragments comprising only variable region components
- C07K2317/622—Single chain antibody (scFv)
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- Zoology (AREA)
- Wood Science & Technology (AREA)
- Biochemistry (AREA)
- Molecular Biology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Health & Medical Sciences (AREA)
- General Engineering & Computer Science (AREA)
- Biotechnology (AREA)
- Microbiology (AREA)
- Medicinal Chemistry (AREA)
- Biomedical Technology (AREA)
- Biophysics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Physics & Mathematics (AREA)
- Plant Pathology (AREA)
- Immunology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- General Chemical & Material Sciences (AREA)
- Crystallography & Structural Chemistry (AREA)
- Analytical Chemistry (AREA)
- Toxicology (AREA)
- Gastroenterology & Hepatology (AREA)
- Virology (AREA)
- Tropical Medicine & Parasitology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Peptides Or Proteins (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Saccharide Compounds (AREA)
- Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
- Medicines Containing Antibodies Or Antigens For Use As Internal Diagnostic Agents (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
Abstract
Description
Claims
Priority Applications (34)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
AU29714/95A AU703264C (en) | 1994-02-17 | 1995-02-17 | DNA mutagenesis by random fragmentation and reassembly |
EP95911826.6A EP0752008B2 (en) | 1994-02-17 | 1995-02-17 | Dna mutagenesis by random fragmentation and reassembly |
JP7521977A JPH10500561A (en) | 1994-02-17 | 1995-02-17 | DNA mutagenesis by random fragmentation and reassembly |
US08/537,874 US5830721A (en) | 1994-02-17 | 1995-02-17 | DNA mutagenesis by random fragmentation and reassembly |
CA002182393A CA2182393C (en) | 1994-02-17 | 1995-02-17 | Dna mutagenesis by random fragmentation and reassembly |
DE0752008T DE752008T1 (en) | 1994-02-17 | 1995-02-17 | DNA MUTAGENESIS THROUGH RANDOM FRAGMENTATION AND RECONSTRUCTION |
AT95911826T ATE216722T1 (en) | 1994-02-17 | 1995-02-17 | DNA MUTAGENESIS BY RANDOM FRAGMENTATION AND RECONSTRUCTION |
DE69526497T DE69526497T2 (en) | 1994-02-17 | 1995-02-17 | DNA MUTAGENESIS THROUGH RANDOM FRAGMENTATION AND RECONSTRUCTION |
DK95911826T DK0752008T3 (en) | 1994-02-17 | 1995-02-17 | DNA mutagenesis by random fragmentation and assembly |
US08/769,062 US6335160B1 (en) | 1995-02-17 | 1996-12-18 | Methods and compositions for polypeptide engineering |
US09/239,395 US6995017B1 (en) | 1994-02-17 | 1999-01-28 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US09/240,734 US6413774B1 (en) | 1994-02-17 | 1999-01-29 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
AU23816/99A AU747034B2 (en) | 1994-02-17 | 1999-04-16 | DNA mutagenesis by random fragmentation and reassembly |
US09/344,002 US6355484B1 (en) | 1994-02-17 | 1999-06-24 | Methods and compositions for polypeptides engineering |
US09/559,671 US6613514B2 (en) | 1994-02-17 | 2000-04-27 | Methods and compositions for polypeptide engineering |
US09/696,313 US6518065B1 (en) | 1994-02-17 | 2000-10-25 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US09/717,391 US6506603B1 (en) | 1994-02-17 | 2000-11-18 | Shuffling polynucleotides by incomplete extension |
US09/717,419 US6406855B1 (en) | 1994-02-17 | 2000-11-22 | Methods and compositions for polypeptide engineering |
US10/246,229 US20030186356A1 (en) | 1994-02-17 | 2002-09-17 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US10/244,956 US7105297B2 (en) | 1994-02-17 | 2002-09-17 | Methods and compositions for cellular and metabolic engineering |
US10/623,036 US7288375B2 (en) | 1994-02-17 | 2003-07-18 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US10/667,868 US20050059109A1 (en) | 1994-02-17 | 2003-09-22 | Methods and compositions for polypeptide engineering |
US11/091,319 US20050186622A1 (en) | 1994-02-17 | 2005-03-28 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
AU2005202165A AU2005202165B2 (en) | 1994-02-17 | 2005-05-18 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US11/286,271 US20060223143A1 (en) | 1995-02-17 | 2005-11-23 | Methods and compositions for polypeptide engineering |
US11/405,038 US20070092887A1 (en) | 1994-02-17 | 2006-04-14 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
AU2006202542A AU2006202542A1 (en) | 1994-02-17 | 2006-06-15 | DNA mutagenesis by random fragmentation and reassembly |
US11/515,879 US20070031878A1 (en) | 1995-02-17 | 2006-09-06 | Methods and compositions for polypeptide engineering |
US11/843,351 US20080261833A1 (en) | 1994-02-17 | 2007-08-22 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US12/011,767 US7795030B2 (en) | 1994-02-17 | 2008-01-28 | Methods and compositions for cellular and metabolic engineering |
US12/012,528 US7868138B2 (en) | 1994-02-17 | 2008-02-01 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US12/557,938 US20100331193A1 (en) | 1994-02-17 | 2009-09-11 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US12/557,519 US7981614B2 (en) | 1994-02-17 | 2009-09-11 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US13/212,915 US20120252701A1 (en) | 1994-02-17 | 2011-08-18 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US08/198,431 US5605793A (en) | 1994-02-17 | 1994-02-17 | Methods for in vitro recombination |
US08/198,431 | 1994-02-17 |
Related Parent Applications (6)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
US08/198,431 Continuation-In-Part US5605793A (en) | 1994-02-17 | 1994-02-17 | Methods for in vitro recombination |
US08/198,431 Continuation US5605793A (en) | 1994-02-17 | 1994-02-17 | Methods for in vitro recombination |
PCT/US1995/002126 Continuation-In-Part WO1995022625A1 (en) | 1994-02-17 | 1995-02-17 | Dna mutagenesis by random fragmentation and reassembly |
US08/425,684 Continuation-In-Part US5834252A (en) | 1994-02-17 | 1995-04-18 | End-complementary polymerase reaction |
US08/564,955 Continuation-In-Part US5811238A (en) | 1994-02-17 | 1995-11-30 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US08/564,965 Continuation-In-Part US5793055A (en) | 1995-11-30 | 1995-11-30 | Hybrid electronic devices, particularly Josephson transistors |
Related Child Applications (15)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
US08/198,431 Continuation-In-Part US5605793A (en) | 1994-02-17 | 1994-02-17 | Methods for in vitro recombination |
PCT/US1995/002126 Continuation-In-Part WO1995022625A1 (en) | 1994-02-17 | 1995-02-17 | Dna mutagenesis by random fragmentation and reassembly |
US08/537,874 Division US5830721A (en) | 1994-02-17 | 1995-02-17 | DNA mutagenesis by random fragmentation and reassembly |
US08/537,874 Continuation-In-Part US5830721A (en) | 1994-02-17 | 1995-02-17 | DNA mutagenesis by random fragmentation and reassembly |
US08/425,684 Continuation-In-Part US5834252A (en) | 1994-02-17 | 1995-04-18 | End-complementary polymerase reaction |
US08/564,955 Continuation-In-Part US5811238A (en) | 1994-02-17 | 1995-11-30 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US08/564,955 A-371-Of-International US5811238A (en) | 1994-02-17 | 1995-11-30 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US62143096A Continuation-In-Part | 1994-02-17 | 1996-03-25 | |
US08/621,859 Continuation-In-Part US6117679A (en) | 1994-02-17 | 1996-03-25 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US08/650,400 Continuation-In-Part US5837458A (en) | 1994-02-17 | 1996-05-20 | Methods and compositions for cellular and metabolic engineering |
US08/769,062 Continuation-In-Part US6335160B1 (en) | 1994-02-17 | 1996-12-18 | Methods and compositions for polypeptide engineering |
US09/100,856 Continuation US6132970A (en) | 1994-02-17 | 1998-06-19 | Methods of shuffling polynucleotides |
US09/100,856 Division US6132970A (en) | 1994-02-17 | 1998-06-19 | Methods of shuffling polynucleotides |
US09/133,508 Continuation US6287861B1 (en) | 1994-02-17 | 1998-08-12 | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
US09/339,904 Continuation-In-Part US6319713B1 (en) | 1994-02-17 | 1999-06-25 | Methods and compositions for polypeptide engineering |
Publications (1)
Publication Number | Publication Date |
---|---|
WO1995022625A1 true WO1995022625A1 (en) | 1995-08-24 |
Family
ID=22733354
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/US1995/002126 WO1995022625A1 (en) | 1994-02-17 | 1995-02-17 | Dna mutagenesis by random fragmentation and reassembly |
Country Status (12)
Country | Link |
---|---|
US (14) | US5605793A (en) |
EP (4) | EP0752008B2 (en) |
JP (6) | JPH10500561A (en) |
CN (1) | CN1145641A (en) |
AT (2) | ATE216722T1 (en) |
AU (3) | AU703264C (en) |
CA (1) | CA2182393C (en) |
DE (5) | DE752008T1 (en) |
DK (2) | DK0934999T3 (en) |
ES (2) | ES2176324T3 (en) |
RU (1) | RU2157851C2 (en) |
WO (1) | WO1995022625A1 (en) |
Cited By (936)
Publication number | Priority date | Publication date | Assignee | Title |
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EP0781351A1 (en) * | 1994-09-16 | 1997-07-02 | Sepracor, Inc. | In vitro method for predicting the evolutionary response of hiv protease to a drug targeted thereagainst |
WO1997030150A2 (en) * | 1996-02-15 | 1997-08-21 | Pangenetics B.V. | Molecules for the induction of immunological tolerance |
WO1998005764A1 (en) * | 1996-08-07 | 1998-02-12 | Novo Nordisk A/S | Nucleic acid pool and method for producing the same |
WO1998005765A1 (en) * | 1996-08-07 | 1998-02-12 | Novo Nordisk A/S | Double-stranded dna with cohesive end(s), and method of shuffling dna using the same |
WO1998016661A2 (en) * | 1996-10-17 | 1998-04-23 | Morphagen | Morphatides: novel shape and structure libraries |
WO1998032845A1 (en) * | 1997-01-24 | 1998-07-30 | Bioinvent International Ab | A method for in vitro molecular evolution of protein function |
WO1998041623A1 (en) | 1997-03-18 | 1998-09-24 | Novo Nordisk A/S | Shuffling of heterologous dna sequences |
WO1998041622A1 (en) * | 1997-03-18 | 1998-09-24 | Novo Nordisk A/S | Method for constructing a library using dna shuffling |
US5837458A (en) * | 1994-02-17 | 1998-11-17 | Maxygen, Inc. | Methods and compositions for cellular and metabolic engineering |
WO1999011818A1 (en) * | 1997-08-28 | 1999-03-11 | Isao Karube | Method for detecting highly functional polypeptides or nucleic acids |
EP0911396A2 (en) * | 1995-11-30 | 1999-04-28 | Maxygen, Inc. | Methods for generating polynucleotides having desired characteristics by iterative selective and recombination |
WO1999020749A1 (en) | 1997-10-20 | 1999-04-29 | Medical Research Council | Method to screen phage display libraries with different ligands |
EP0920496A1 (en) * | 1997-03-25 | 1999-06-09 | California Institute Of Technology | Recombination of polynucleotide sequences using random or defined primers |
WO1999029882A2 (en) * | 1997-12-10 | 1999-06-17 | Pioneer Hi-Bred International, Inc. | Methods for altering the nutritional value of a plant protein, vegetative storage protein, vsp, by altering the amino acid content of proteins |
EP0932670A1 (en) * | 1996-03-25 | 1999-08-04 | Maxygen, Inc. | Evolving cellular dna uptake by recursive sequence recombination |
US5948653A (en) * | 1997-03-21 | 1999-09-07 | Pati; Sushma | Sequence alterations using homologous recombination |
WO1999047552A2 (en) * | 1998-03-17 | 1999-09-23 | Novartis Ag | Genes encoding mlo proteins and conferring fungal resistance upon plants |
EP0946755A1 (en) * | 1996-12-18 | 1999-10-06 | Maxygen, Inc. | Methods and compositions for polypeptide engineering |
US5965408A (en) * | 1996-07-09 | 1999-10-12 | Diversa Corporation | Method of DNA reassembly by interrupting synthesis |
WO2000023564A2 (en) * | 1998-10-16 | 2000-04-27 | Xencor, Inc. | Protein design automation for protein libraries |
WO2000024883A1 (en) | 1998-10-26 | 2000-05-04 | Novozymes A/S | Constructing and screening a dna library of interest in filamentous fungal cells |
EP1007732A1 (en) * | 1997-01-16 | 2000-06-14 | Maxygen, Inc. | Evolution of whole cells and organisms by recursive sequence recombination |
WO2000052155A2 (en) * | 1999-03-05 | 2000-09-08 | Maxygen, Inc. | Recombination of insertion modified nucleic acids |
WO2000053744A2 (en) * | 1999-03-09 | 2000-09-14 | Diversa Corporation | End selection in directed evolution |
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