WO1999058118A2 - METHODS FOR REGULATING HEMATOPOIESIS USING CpG-OLIGONUCLEOTIDES - Google Patents
METHODS FOR REGULATING HEMATOPOIESIS USING CpG-OLIGONUCLEOTIDES Download PDFInfo
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- WO1999058118A2 WO1999058118A2 PCT/IB1999/001285 IB9901285W WO9958118A2 WO 1999058118 A2 WO1999058118 A2 WO 1999058118A2 IB 9901285 W IB9901285 W IB 9901285W WO 9958118 A2 WO9958118 A2 WO 9958118A2
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/117—Nucleic acids having immunomodulatory properties, e.g. containing CpG-motifs
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
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- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K39/39—Medicinal preparations containing antigens or antibodies characterised by the immunostimulating additives, e.g. chemical adjuvants
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- A—HUMAN NECESSITIES
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- A61K39/00—Medicinal preparations containing antigens or antibodies
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- A61K2039/55511—Organic adjuvants
- A61K2039/55555—Liposomes; Vesicles, e.g. nanoparticles; Spheres, e.g. nanospheres; Polymers
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- A61K39/00—Medicinal preparations containing antigens or antibodies
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- A61K2039/55511—Organic adjuvants
- A61K2039/55561—CpG containing adjuvants; Oligonucleotide containing adjuvants
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- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K2039/555—Medicinal preparations containing antigens or antibodies characterised by a specific combination antigen/adjuvant
- A61K2039/55511—Organic adjuvants
- A61K2039/55566—Emulsions, e.g. Freund's adjuvant, MF59
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- A—HUMAN NECESSITIES
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- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/30—Chemical structure
- C12N2310/31—Chemical structure of the backbone
- C12N2310/315—Phosphorothioates
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- C12N2310/00—Structure or type of the nucleic acid
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- C12N2310/34—Spatial arrangement of the modifications
- C12N2310/345—Spatial arrangement of the modifications having at least two different backbone modifications
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
Definitions
- the present invention relates to methods for regulating hematopoiesis using CpG containing oligonucleotides.
- the invention relates to methods of treating thrombopoiesis and anemia by regulating hematopoiesis.
- the invention also relates to methods of regulating immune system remodeling by administering CpG oligonucleotides to manipulate hematopoiesis.
- hematopoietic cytokines are currently in clinical trials as treatments to prevent or reduce such complications.
- Hematopoietic development is considered to be regulated by two categories of factors.
- One category includes colony-stimulating factors (CSFs), which promote colony formation and proliferation of cells of various lineages.
- CSFs colony-stimulating factors
- Another is potentiators, which potentiate maturation or differentiation.
- Megakaryocyte-CSFs reportedly include IL-3, granulocyte-macrophage colony-stimulating factor (GM-CSF) and stem cell factor (SCF)
- Megakaryocyte potentiators reportedly include IL-6, IL-7, IL-11, erythropoietin (EPO) and leukemia inhibitory factor (LIF).
- EPO erythropoietin
- LIF leukemia inhibitory factor
- Platelet production is a terminal phenomenon in the development of megakaryocytes in vivo.
- Thrombopoietin (TPO) was reported to posses both Meg-CSF
- a fraction extracted from BCG (designated MY-1) was shown to exhibit anti-tumor activity in vivo, augment NK cell activity and trigger type I and type II IFN release from murine spleen cells or human peripheral blood lymphocytes (PBL) in vitro.
- PBL peripheral blood lymphocytes
- C57BL/6 mice develop a Thl driven response that is protective, however BALB/c mice develop a Th2 driven response that is not protective.
- administration of CpG-ODN cured Leishmania major infected BALB/c mice when applied as late as 15 days after infection.
- the phenotype ofthe response post CpG intervention was Thl- like although the initial response to L. major challenge was Th2-like.
- CpG-ODN triggers the release of IL-12 into the serum post injection and IL-12 is a known inducer of Thl differentiation.
- the wave of IL-12 is transient, however, peaking at 2-4 h and returning to near baseline by 24 h.
- Splenomegaly is a well-recognized phenomenon accompanying some oligonucleotide injections.
- Branda et al. observed that mice developed massive splenomegaly and polyclonal hypergammaglobulinemia within 2 days after intravenous injection of a phosphorothioate oligomer that is antisense to a portion ofthe rev region ofthe HIV-1 genome.
- mice with antisense to the initiation region ofthe env gene resulted in (i) increased spleen cell numbers, primarily due to an increase in splenic B cells, (ii) increased class II MHC expression on B cells, (iii) increased RNA and DNA synthesis, and (iv) increased numbers of immunoglobulin (Ig)- producing cells.
- Zhao et al. concluded that phosphorothioate ODN induce splenomegaly due to B cell proliferation. Zhao, Q et al. (1996) Biochem Pharmacol 51 :173- 182. In a follow-up study Zhao et al. found administration ofthe 27-mer-phosphorothioate oligonucleotide into mice resulted in splenomegaly and an increase in IgM production 48 hr post-administration. Zhao, Q et al. (1996) Biochem Pharmacol 52:1537-1544.
- Agrawal et al. evaluated the in vivo toxicological effects of phosphorothioate oligodeoxynucleotides (PS oligo).
- PS oligo phosphorothioate oligodeoxynucleotides
- Agrawal, S et al. (1997) Antisense Nucleic Acid Drug Dev 7:575-584.
- Oligodeoxynucleotides were administrated intravenously to male and female rats at doses of 3, 10, and 30 mg/kg/day for 14 days. Rats were killed on day 15, blood samples were collected for hematology and clinical chemistry determinations, and tissues, including lymph nodes, spleens, livers, and kidneys, were subjected to pathologic examinations.
- the toxicity profiles of four oligodeoxynucleotides were very similar, but differed in magnitude.
- Hematopoietic development is considered to be regulated by colony-stimulating factors, which promote colony formation and proliferation of cells of various primitive lineages, and potentiators, which potentiate maturation or differentiation into various blood cells.
- colony-stimulating factors which promote colony formation and proliferation of cells of various primitive lineages
- potentiators which potentiate maturation or differentiation into various blood cells.
- the observation of splenomegaly is explained by direct ODN B cell mitogenicity in a sequence specific manner.
- Zhao et al. administered to mice a 27-mer phosphorothioate oligonucleotide (sequence 5'-TCG TCG CTG TCT CCG CTT CTT CTT GCC-3' SEQ ID NO: 109), which had previously been shown to cause splenomegaly and hypergammaglobulinemia upon in vivo administration in mice, and studied the pattern and kinetics of cytokine production at both the splenic mRNA and serum protein levels. Zhao et al.
- IL-12 has been shown to be released in response to CpG-ODN and is an inducer of IFN- ⁇ . Control of intracellular bacterial infections requires IFN- ⁇ both for establishing a Thl T-cell response and for activating macrophages to kill the bacteria. Murray et al.
- mice deficient in IFN- ⁇ produces an immune response characterized by a Th2 T-cell phenotype, florid bacterial growth, and death.
- Murray, PJ et al. (1998) Blood 91 :2914-2924. They reported that IFN- ⁇ -deficient mice infected with mycobacteria also undergo a dramatic remodeling ofthe hematopoietic system. Myeloid cell proliferation proceeds unchecked throughout the course of mycobacterial infection, resulting in a transition to extramedullary hematopoiesis.
- IFN- ⁇ may be a key cytokine in the coordinate regulation of immune effector cells and myelopoiesis.
- IL-3/GM-CSF/IL-5 (ThO and Th2 cytokines) produced by activated T cells play a major role in expansion of hematopoietic cells in emergency
- IL-13 a recently identified Th2 cytokine, shares some, but not all, IL-4 functions, including inhibition of monocyte and macrophage activation, stimulation of human B cells, and induction of growth and differentiation of mouse bone marrow cells in vitro.
- Spleen cells from rIL- 13 -treated mice showed greatly increased responsiveness in vitro to recombinant forms of mouse IL-3, mouse granulocyte-macrophage CSF, or human CSF-1 and, to a lesser extent, to mouse IL-4 or IL-13.
- the rIL-13- treated mice also showed significant increases in CFU-E, CFU-C, and erythroid burst colonies in the spleen, further indicating the presence of increased numbers of hematopoietic precursors. Hematologic analyses indicated that rIL-13 treatment induced slight anemia and striking monocytosis.
- spleen cells from rIL- 13 -treated mice produced significantly more IL-6 upon LPS stimulation.
- Th2 driven responses are strongly predisposing for extramedullary hematopoiesis.
- CpG-ODN injection is Thl -biasing and Th2-suppressive.
- IFN- ⁇ the hallmark Thl cytokine
- Th2 cytokine is considered suppressive for hematopoietic colony forming
- 11-13 a Th2 cytokine has been shown to induce hematopoiesis.
- ODN administration has been shown to lead to thrombocytopenia, anemia, and neutropenia.
- IL-12 a central cytokine in CpG-ODN effects, induces thrombocytopenia.
- the phenomenon of splenomegaly has been repeatedly correlated with B cell mitogenicity of ODN, suggesting that the ODN induces splenomegaly through B cell activation rather than hematopoiesis.
- the invention is a method for inducing an antigen-specific immune response by administering to a subject an oligonucleotide, having a sequence including at least the following formula:
- oligonucleotide includes at least 8 nucleotides wherein C and G are unmethylated and wherein X, and X 2 are nucleotides, and exposing the subject to an antigen at least 3 days after the oligonucleotide is administered to the subject to produce an antigen-specific immune response.
- the subject may be exposed to the antigen at least 48 hours after the CpG oligonucleotide is administered to the subject. It has been discovered that immune system remodeling begins to occur within 48 hours of CpG administration. It has also been discovered that the primed immune cells are still capable of responding to antigen even 30 days after CpG administration.
- the antigen is administered at least 4 days after the oligonucleotide is administered to the subject. In another embodiment the antigen is administered at least 7 days after the oligonucleotide is administered to the subject. In another embodiment the antigen is administered at least 15 days after the oligonucleotide is administered to the subject. In yet another embodiment the antigen is administered at least 30 days after the oligonucleotide is administered to the subject.
- the antigen may be any type of antigen known in the art.
- the antigen may be cells, cell extracts, proteins, peptides, polysaccharides, polysaccharide conjugates, lipids, glycolipids, carbohydrate, viral extracts, viruses, bacteria, fungi, parasites, and allergens.
- the antigen may be a nucleic acid encoding an antigen.
- the subject is exposed to an antigen.
- the subject may be actively exposed to the antigen.
- the antigen may be delivered in conjunction with a colloidal dispersion system.
- the colloidal dispersion system is selected from the group consisting of macromolecular complexes, nanocapsules, microspheres, beads, and lipid-based systems in another embodiment.
- a lipid-based system is preferably selected from the group consisting of oil-in- water emulsions, micelles, mixed micelles, and liposomes.
- the antigen may be administered in conjunction with an adjuvant.
- thrombocytopenia is a non-chemotherapeutic induced thrombocytopenia.
- the invention is a method of treating a subject at risk of developing thrombocytopenia by administering to a subject at risk of developing thrombocytopenia an oligonucleotide, having a sequence including at least the following formula: 5' X 1 CGX 2 3' wherein the oligonucleotide includes at least 8 nucleotides wherein C and G are unmethylated and wherein X, and X 2 are nucleotides, in an amount effective to prevent a decrease in platelet counts ordinarily expected under platelet-depleting conditions in the subject when the subject is exposed to platelet-depleting conditions.
- the oligonucleotide is administered in an amount effective to increase platelet counts in the subject by at least 10,000 platelets per microliter. In another embodiment the oligonucleotide is administered in an amount effective to increase platelet counts in the subject by at least 20,000 platelets per microliter. In yet another embodiment the oligonucleotide is administered to the subject in an amount effective to increase the platelet counts in the subject by 100 percent.
- the thrombocytopenia is any type of thrombocytopenia known in the art.
- the thrombocytopenia is a drug-induced thrombocytopenia.
- the thrombocytopenia is due to an autoimmune disorder such as idiopathic thrombocytopenic purpura.
- the thrombocytopenia is a thrombocytopenia resulting from accidental radiation exposure.
- the thrombocytopenia is a thrombocytopenia resulting from therapeutic radiation exposure in yet another embodiment.
- the invention is a method for treating anemia by administering to a subject having anemia an oligonucleotide, having a sequence including at least the following formula: 5' X,CGX 2 3' wherein the oligonucleotide includes at least 8 nucleotides wherein C and G are unmethylated and wherein X, and X 2 are nucleotides, in an amount effective to induce erythropoiesis in the subject.
- the oligonucleotide is administered in an amount effective to increase erythroblast counts in the subject by at least 10 percent. In another embodiment the oligonucleotide is administered in an amount effective to increase erythroblast counts in the subject by at least 20 percent. According to yet another embodiment the oligonucleotide is administered to the subject in an amount effective to increase erythroblast counts in the subject by 100 percent.
- the anemia can be any type of anemia known in the art.
- the anemia is a drug-induced anemia.
- the anemia is selected from the group consisting of an immunohemolytic disorder, genetic disorders such as hemoglobinopathy and inherited hemolytic anemia; inadequate production despite adequate iron stores; chronic disease such as kidney failure; and chronic inflammatory disorder such as rheumatoid arthritis.
- the subject having or at risk of having a hematopoietic disorder is a vertebrate animal.
- the subject is a human. In another preferred embodiment, the subject is a dog. In yet other embodiments, the subject is a nonhuman vertebrate animal selected from the group consisting of a cat, horse, cow, pig, sheep, goat, chicken, primate, fish, rat, and mouse.
- the CpG oligonucleotide is an oligonucleotide, having a sequence including at least the following formula:
- the oligonucleotide is 8 to 100 nucleotides in length. In other embodiments the oligonucleotide is 8 to 30 nucleotides in length. Preferably the oligonucleotide is a stabilized oligonucleotide.
- the oligonucleotide includes a phosphate backbone modification which is a phosphorothioate or phosphorodithioate modification. In a preferred embodiment the phosphate backbone modification occurs at the 5' end ofthe oligonucleotide. In another preferred embodiment the phosphate backbone modification occurs at the 3' end ofthe oligonucleotide.
- the CpG oligonucleotide has a sequence including at least the following formula: wherein XjX 2 are nucleotides selected from the group consisting of:GpT, GpG, GpA, ApA, ApT, ApG, CpT, CpA, CpG, TpA, TpT, and TpG; and X 3 X 4 are nucleotides selected from the group consisting of: TpT, CpT, ApT, TpG, ApG, CpG, TpC, ApC, CpC, TpA, ApA, and CpA.
- the CpG oligonucleotide has a sequence including at least the following formula:
- N is a nucleic acid sequence composed of from about 0-25 nucleotides.
- X,X 2 are nucleotides selected from the group consisting of: GpT, GpG, GpA and ApA and X 3 X 4 are nucleotides selected from the group consisting of: TpT andCpT in another embodiment.
- Figure 1 is a graph depicting the kinetics of increased spleen weight induced by CpG- ODN.
- Figure 2 is a graph depicting the changes in phenotype of spleen cells after stimulation with CpG-ODN.
- Figure 3 is a graph depicting the CpG-ODN induced changes in splenic cell number, number of splenic and BM GM-CFU.
- Figure 4 is a graph depicting the dose titration of CpG-ODN.
- Figure 5 is a graph depicting the increased number of BFU-E induced by CpG-ODN.
- Figure 6 is a graph depicting the determination of spleen colony forming units of normal vs. CpG-ODN induced spleen cells (CFU-S Assay).
- Figure 7 is a graph depicting the increased number of CM-CFU and enhanced CTL function after ODN-injection correlates with increased resistance towards lethal listeriosis in sublethally irradiated mice.
- Figure 8 is a pair of graphs depicting spleen weights and spleen cell counts 5 days following 5 fluorouracil administration to mice, with or without coadministration of CpG-ODN.
- Figure 9 is a graph depicting the splenic T lymphocyte counts on days 4, 7, and 10 following 5 fluorouracil administration to mice, with or without coadministration of CpG-ODN.
- Figure 10 is a graph depicting the splenic B lymphocyte counts on days 4, 7, and 10 following 5 fluorouracil administration to mice, with or without coadministration of CpG- ODN.
- Figure 11 is a graph depicting the white blood cell counts on days 4, 7, and 10 following 5 fluorouracil administration to mice, with or without coadministration of CpG- ODN.
- Figure 13 is a graph depicting the platelet counts on days 4, 7, and 10 following 5 fluorouracil administration to mice, with or without coadministration of CpG-ODN.
- Figure 14 is a graph depicting the induction of a cytotoxic T lymphocyte (CTL) response to specific antigen (ovalbumin, OVA) 10 days after administration of 5 fluorouracil, with or without coadministration of CpG-ODN.
- CTL cytotoxic T lymphocyte
- OVA ovalbumin
- Figure 16 is a graph depicting the enhanced and extended induction of antibody in response to delayed antigen exposure in mice pretreated with CpG-ODN compared to PBS- pretreated mice.
- Figure 17 is a graph depicting the kinetic profile of CTL induction in response to delayed antigen exposure in mice pretreated with CpG-ODN compared to PBS-pretreated mice.
- the invention relates to methods for regulating specific aspects of hematopoiesis.
- disorders ofthe hematopoietic system vary depending on the factor causing the disorder as well as the cell type affected.
- the invention is a method for inducing immune system remodeling.
- the process of immune system remodeling is based on the generation of immune cells in response to a stimuli in preparation for generating a strong antigen specific immune response.
- the stimulus is a CpG oligonucleotide. It has been discovered according to the invention that when a CpG oligonucleotide is administered to a subject, after an initial delay, the immune system ofthe subject undergoes a repopulation event to produce a population of immune cells which are primed to generate an antigen specific response. This renewed population of cells remains in the body for an extensive period of time. When the primed cells encounter antigen the cells respond to the antigen by producing an antigen specific immune response. In fact the antigen is capable of producing an immune specific response even in the absence of an adjuvant. Ordinarily the administration of antigen in the absence of an adjuvant would not produce a specific immune response.
- CpG when CpG is administered to a subject, CpG activates the circulating immune cells, causing them to mature into mature active immune cells. If CpG is administered at the same time or slightly before or after an antigen then the circulating immune cells will likely contact the antigen and develop a specific immune response against that antigen. After a period of about 24 hours, the circulating immune cells will no longer be capable of mounting an antigen specific immune response because the circulating cells have already been activated and matured. It has been found according to the invention, however, that approximately two days after the administration of CpG the subject's immune system has been repopulated with immune cells which are capable of being matured and activated in response to antigen.
- oligonucleotide includes at least 8 nucleotides wherein C and G are unmethylated and wherein X, and X 2 are nucleotides, and exposing the subject to an antigen at least 3 days after the oligonucleotide is administered to the subject to produce an antigen-specific immune response.
- an "antigen” as used herein is a molecule capable of provoking an immune response.
- Antigens include but are not limited to cells, cell extracts, polysaccharides, polysaccharide conjugates, lipids, glycolipids, carbohydrate, peptides, proteins, viruses, and viral extracts.
- the term antigen broadly includes any type of molecule which is recognized by a host immune system as being foreign.
- Antigens include but are not limited to cancer antigens, microbial antigens, and allergens.
- Cancers or tumors include but are not limited to biliary tract cancer; brain cancer; breast cancer; cervical cancer; choriocarcinoma; colon cancer; endometrial cancer; esophogeal cancer; gastric cancer; intraepithelial neoplasms; lymphomas; liver cancer; lung cancer (e.g. small cell and non-small cell); melanoma; neuroblastomas; oral cancer; ovarian cancer; pancreas cancer; prostate cancer; rectal cancer; sarcomas; skin cancer; testicular cancer; thyroid cancer; and renal cancer, as well as other carcinomas and sarcomas.
- antigens include the intact microorganism as well as natural isolates and fragments or derivatives thereof and also synthetic compounds which are identical to or similar to natural microorganism antigens.
- a compound is similar to a natural microorganism antigen if it induces an immune response (humoral and/or cellular) to a natural microorganism antigen.
- antigens are used routinely in the art and are well known to those of ordinary skill in the art.
- Retroviridae e.g. human immunodeficiency viruses, such as HIV-1 (also referred to as HTLV-III, LAV or HTLV- III/LAV, or HIV-III; and other isolates, such as HIV-LP; Picornaviridae (e.g. polio viruses, hepatitis A virus; enteroviruses, human Coxsackie viruses, rhinoviruses, echoviruses); Calciviridae (e.g. strains that cause gastroenteritis); Togaviridae (e.g. equine encephalitis viruses, rubella viruses); Flaviridae (e.g.
- infectious bacteria examples include but are not limited to: Helicobacter pyloris, Borelia burgdorferi, Legionella pneumophilia, Mycobacteria sps (e.g. M. tuberculosis, M. avium, M. intracellulare, M. kansaii, M.
- Streptococcus pyogenes Group A Streptococcus
- Streptococcus agalactiae Group B Streptococcus
- Streptococcus viridans group
- Streptococcus faecalis Streptococcus bovis
- Streptococcus anaerobic sps.
- Streptococcus pneumoniae pathogenic Campylobacter sp., Enterococcus sp., Haemophilus influenzae, Bacillus antracis, corynebacterium diphtheriae, corynebacterium sp.
- infectious fungi examples include: Cryptococcus neoformans, Histoplasma capsulatum, Coccidioides immitis, Blastomyces dermatitidis, Chlamydia trachomatis, Candida albicans.
- Other infectious organisms i.e., protists
- Plasmodium such as Plasmodium falciparum, Plasmodium malar iae, Plasmodium ovale, and Plasmodium vivax and Toxoplasma gondii.
- the methods ofthe invention are also useful for treating allergic diseases.
- the methods are accomplished in the same way as described above for the tumor immunotherapy and treatment of infectious diseases except that the antigen is specific for an allergen.
- allergic diseases are generally treated by the injection of small doses of antigen followed by subsequent increasing dosage of antigen. It is believed that this procedure produces a memory immune response to prevent further allergic reactions.
- These methods are associated with the risk of side effects such as an allergic response.
- the methods ofthe invention avoid these problems.
- Dactylis glomerata Dactylis glomerata); Festuca (e.g. Festuca elatior); Poa (e.g. Poa pratensis or Poa compressd); Avena (e.g. Avena sativa); Holcus (e.g. Holcus lanatus); Anthoxanthum (e.g. Anthoxanthum odoratum); Arrhenatherum (e.g. Arrhenatherum elatius); Agrostis (e.g. Agrostis alba); Phleum (e.g. Phleum pratense); Phalaris (e.g. Phalaris arundinacea); Paspalum (e.g. Paspalum notatum); Sorghum (e.g. Sorghum halepensis); and Bromus (e.g. Bromus inermis).
- Festuca e.g. Festuca elatior
- Poa e.g. Poa
- the subject's immune cells are exposed to the antigen 60 hours after the CpG. In other embodiments the subject's immune cells are exposed to the antigen at least 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,1 8, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, or 40 days after the CpG.
- antigens include infectious microbes such as virus, bacteria and fungi and fragments thereof, derived from natural sources or synthetically.
- infectious virus of both human and non-human vertebrates include retroviruses, RNA viruses and DNA viruses.
- This group of retroviruses includes both simple retroviruses and complex retroviruses.
- the simple retroviruses include the subgroups of B-type retroviruses, C-type retroviruses and D-type retroviruses.
- An example of a B-type retrovirus is mouse mammary tumor virus (MMTV).
- the C-type retroviruses include subgroups C-type group A (including Rous sarcoma virus (RSV), avian leukemia virus (ALV), and avian myeloblastosis virus (AMV)) and C-type group B (including murine leukemia virus (MLV), feline leukemia virus (FeLV), murine sarcoma virus (MSV), gibbon ape leukemia virus (GALV), spleen necrosis virus (SNV), reticuloendotheliosis virus (RV) and simian sarcoma virus (SSV)).
- the D-type retroviruses include Mason-Pfizer monkey virus (MPMV) and simian retrovirus type 1 (SRV-1).
- CIAV infection results in a clinical disease, characterized by anemia, hemorrhage and immunosuppression, in young susceptible chickens. Atrophy ofthe thymus and ofthe bone marrow and consistent lesions of CIAV-infected chickens are also characteristic of CIAV infection. Lymphocyte depletion in the thymus, and occasionally in the bursa of Fabricius, results in immunosuppression and increased susceptibility to secondary viral, bacterial, or fungal infections which then complicate the course ofthe disease. The immunosuppression may cause aggravated disease after infection with one or more of Marek's disease virus (MDV), infectious bursal disease virus, reticuloendotheliosis virus, adenovirus, or reovirus.
- MDV Marek's disease virus
- EHV's include EHV-2, or equine cytomegalovirus, EHV-3, equine coital exanthema virus, and EHV-4, previously classified as EHV-1 subtype 2. Sheep and goats can be infected by a variety of dangerous microorganisms including visna-maedi.
- FeLV feline leukemia virus
- FeSV feline sarcoma virus
- RD-114 endogenous type C oncornavirus
- FeSFV feline syncytia-forming virus
- FeLV is the most significant pathogen, causing diverse symptoms, including lymphoreticular and myeloid neoplasms, anemias, immune mediated disorders, and an immunodeficiency syndrome which is similar to human acquired immune deficiency syndrome (AIDS).
- AIDS human acquired immune deficiency syndrome
- FeLV -AIDS a particular replication-defective FeLV mutant, designated FeLV -AIDS, has been more particularly associated with immunosuppressive properties.
- Feline infectious peritonitis is a sporadic disease occurring unpredictably in domestic and wild Felidae. While FIP is primarily a disease of domestic cats, it has been diagnosed in lions, mountain lions, leopards, cheetahs, and the jaguar. Smaller wild cats that have been afflicted with FIP include the lynx and caracal, sand cat, and pallas cat. In domestic cats, the disease occurs predominantly in young animals, although cats of all ages are susceptible. A peak incidence occurs between 6 and 12 months of age. A decline in incidence is noted from 5 to 13 years of age, followed by an increased incidence in cats 14 to 15 years old.
- Aquaculture species include but are not limited to fin-fish, shellfish, and other aquatic animals.
- Fin-fish include all vertebrate fish, which may be bony or cartilaginous fish, such as, for example, salmonids, carp, catfish, yellowtail, seabream, and seabass.
- Salmonids are a family of fin-fish which include trout (including rainbow trout), salmon, and Arctic char.
- shellfish include, but are not limited to, clams, lobster, shrimp, crab, and oysters.
- Other cultured aquatic animals include, but are not limited to eels, squid, and octopi.
- Polypeptides of viral aquaculture pathogens include but are not limited to glycoprotein
- the subject is exposed to the antigen.
- the term “exposed to” refers to either the active step of contacting the subject with an antigen or the passive exposure ofthe subject to the antigen in vivo.
- Methods for the active exposure of a subject to an antigen are well-known in the art.
- an antigen is administered directly to the subject by any means such as intravenous, intramuscular, oral, transdermal, mucosal, intranasal, intratracheal, or subcutaneous administration.
- the antigen can be administered systemically or locally. Methods for administering the antigen and the CpG are described in more detail below.
- a subject is passively exposed to an antigen if an antigen becomes available for exposure to the immune cells in the body.
- the methods in which a subject is passively exposed to an antigen can be particularly dependent on timing of CpG oligonucleotide administration.
- the subject may be administered the CpG oligonucleotide on a regular basis when that risk is greatest, i.e., during allergy season or after exposure to a cancer causing agent.
- the CpG oligonucleotide may be administered to travelers before they travel to foreign lands where they are at risk of exposure to infectious agents.
- the CpG oligonucleotide may be administered to soldiers or civilians at risk of exposure to bio warfare.
- a tumor begins to form in the subject, the subject will develop a specific immune response against one or more ofthe tumor antigens.
- This aspect ofthe invention is particularly advantageous when the antigen to which the subject will be exposed is unknown. For instance, in soldiers at risk of exposure to biowarfare, it is generally not known what biological weapon to which the soldier might be exposed. A subject traveling to foreign countries may likewise not know what infectious agents they might come into contact with. By inducing immune system remodeling the immune system will be primed to respond to any antigen.
- Liposomes are artificial membrane vessels which are useful as a delivery vector in vivo or in vitro. It has been shown that large unilamellar vessels (LUV), which range in size from 0.2 - 4.0 ⁇ can encapsulate large macromolecules within the aqueous interior and these macromolecules can be delivered to cells in a biologically active form (Fraley, et al., Trends Biochem. Sci, 6:77 (1981)).
- LUV large unilamellar vessels
- the antigen may be delivered to the subject in a nucleic acid molecule which encodes for the antigen such that the antigen must be expressed in vivo.
- the nucleic acid encoding the antigen is operatively linked to a gene expression sequence which directs the expression ofthe antigen nucleic acid within a eukaryotic cell.
- the "gene expression sequence” is any regulatory nucleotide sequence, such as a promoter sequence or promoter-enhancer combination, which facilitates the efficient transcription and translation of the antigen nucleic acid to which it is operatively linked.
- the gene expression sequence may, for example, be a mammalian or viral promoter, such as a constitutive or inducible promoter.
- Exemplary viral promoters which function constitutively in eukaryotic cells include, for example, promoters from the simian virus, papilloma virus, adenovirus, human immunodeficiency virus (HIV), rous sarcoma virus, cytomegalovirus, the long terminal repeats (LTR) of moloney leukemia virus and other retroviruses, and the thymidine kinase promoter of herpes simplex virus.
- Other constitutive promoters are known to those of ordinary skill in the art.
- the promoters useful as gene expression sequences ofthe invention also include inducible promoters. Inducible promoters are expressed in the presence of an inducing agent.
- the metallothionein promoter is induced to promote transcription and translation in the presence of certain metal ions.
- Other inducible promoters are known to those of ordinary skill in the art.
- the gene expression sequence shall include, as necessary, 5' non- transcribing and 5' non-translating sequences involved with the initiation of transcription and translation, respectively, such as a TATA box, capping sequence, CAAT sequence, and the like.
- 5' non-transcribing sequences will include a promoter region which includes a promoter sequence for transcriptional control ofthe operably joined antigen nucleic acid.
- the gene expression sequences optionally include enhancer sequences or upstream activator sequences as desired.
- gene carrying plasmids can be delivered to the immune system using bacteria.
- Modified forms of bacteria such as Salmonella can be transfected with the plasmid and used as delivery vehicles.
- the bacterial delivery vehicles can be administered to a host subject orally or by other administration means.
- the bacteria deliver the plasmid to immune cells, e.g. dendritic cells, probably by passing through the gut barrier. High levels of immune protection have been established using this methodology.
- Preferred synthetic oligonucleotides do not include a CCGG quadmer or more than one CCG or CGG trimer at or near the 5' and/or 3' terminals.
- Stabilized oligonucleotides where the oligonucleotide incorporates a phosphate backbone modification, as discussed in more detail below are also preferred.
- the modification may be, for example, a phosphorothioate or phosphorodithioate modification.
- the phosphate backbone modification occurs at the 5' end ofthe nucleic acid for example, at the first two nucleotides ofthe 5' end ofthe oligonucleotide.
- a “stabilized nucleic acid molecule” shall mean a nucleic acid molecule that is relatively resistant to in vivo degradation (e.g. via an exo- or endo-nuclease). Stabilization can be a function of length or secondary structure. Unmethylated CpG oligonucleotides that are tens to hundreds of kbs long are relatively resistant to in vivo degradation. For shorter CpG oligonucleotides, secondary structure can stabilize and increase their effect.
- Preferred stabilized oligonucleotides ofthe instant invention have a modified backbone. It has been demonstrated that modification ofthe oligonucleotide backbone provides enhanced activity ofthe CpG oligonucleotides when administered in vivo.
- CpG constructs including at least two phosphorothioate linkages at the 5' end ofthe oligodeoxyribonucleotide in multiple phosphorothioate linkages at the 3' end, preferably 5, provides maximal activity and protected the oligodeoxyribonucleotide from degradation by intracellular exo- and endo-nucleases.
- modified oligodeoxyribonucleotides include phosphodiester modified oligodeoxyribonucleotide, combinations of phosphodiester and phosphorothioate oligodeoxyribonucleotide, methylphosphonate, methylphosphorothioate, phosphorodithioate, and combinations thereof.
- phosphodiester modified oligodeoxyribonucleotide combinations of phosphodiester and phosphorothioate oligodeoxyribonucleotide, methylphosphonate, methylphosphorothioate, phosphorodithioate, and combinations thereof.
- Both phosphorothioate and phosphodiester oligonucleotides containing CpG motifs are active in APCs such as dendritic cells. However, based on the concentration needed to induce CpG specific effects, the nuclease resistant phosphorothioate backbone CpG oligonucleotides are more potent (2 ⁇ g/ml for the phosphorothioate vs. a total of 90 ⁇ g/ml for phosphodiester).
- the ability of a particular CpG oligonucleotide to induce immune system remodeling can be tested in various immune cell assays which assess the stimulation index ofthe oligonucleotide.
- the stimulation index ofthe CpG oligonucleotide with regard to B cell proliferation is at least about 5, preferably at least about 10, more preferably at least about 15 and most preferably at least about 20 as determined by incorporation of 3 H uridine in a murine B cell culture, which has been contacted with 20 ⁇ M of ODN for 20h at 37 °C and has been pulsed with 1 ⁇ Ci of 3 H uridine; and harvested and counted 4h later as described in detail in copending PCT Published Patent Applications claiming priority to U.S. Serial Nos.
- An APC has its ordinary meaning in the art and includes, for instance, dendritic cells such as immature dendritic cells and precursor and progenitor dendritic cells, as were as mature dendritic cells which are capable of taking up and expressing antigen.
- dendritic cells such as immature dendritic cells and precursor and progenitor dendritic cells, as were as mature dendritic cells which are capable of taking up and expressing antigen.
- Such a population of APC or dendritic cells is referred to as a primed population of APCs or dendritic cells.
- CpG oligonucleotides can be administered to a subject alone prior to the administration of an antigen.
- the oligonucleotides can also be administered to a subject in conjunction with an antigen to provide an immediate antigen specific response.
- a second antigen which may be the same or different from the first antigen may then be administered to the subject at least two days after the administration of CpG.
- the term in conjunction with refers to the administration ofthe CpG oligonucleotide slightly before or slightly after or at the same time as the first antigen.
- the terms slightly before and slightly after refer to a time period of 24 hours and preferably 12 hours.
- an effective amount of an appropriate CpG oligonucleotide alone or formulated as a nucleic acid delivery complex can be administered to a subject by any mode allowing the oligonucleotide to be taken up by the appropriate target cells (e.g. dendritic cells).
- Preferred routes of administration include but are not limited to oral, transdermal (e.g. via a patch), injection (subcutaneous, intravenous, parenteral, intraperitoneal, intrathecal, etc.), intranasal, intratracheal, and mucosal.
- An injection may be in a bolus or a continuous infusion.
- At least three physiological conditions are known to result in thrombocytopenia: a decreased production of platelets in the bone marrow; an increased splenic sequestration of platelets; or an accelerated destruction of platelets.
- conventional therapies in order to successfully treat thrombocytopenia one must first identify which mechanism is causing the decrease in platelet levels and then treat the subject by administering a drug or instituting a procedure which will eliminate the underlying cause ofthe platelet loss.
- thrombocytopenia is a disorder in which the platelet levels in the affected individual fall below a normal range of platelets for that individual.
- a patient with a malignant tumor who is prescribed a chemotherapeutic treatment is at risk of developing treatment-induced thrombocytopenia and a subject who has an increased risk of exposure to infectious agents is at risk of developing infection-induced thrombocytopenia.
- the invention in one aspect is a method for increasing platelet counts in a subject having thrombocytopenia or subject at risk of developing thrombocytopenia by administering to the subject an oligonucleotide, having a sequence including at least the following formula:
- Horses also develop hematopoietic disorders such as anemia.
- One anemic condition that horses develop is an exercise induced increase in the number of crenated or spiculated red blood cells as described in US Patent No. 4,500,530.
- the red blood cell spiculation results in destruction ofthe cells leading to sports anemia.
- the methods ofthe invention may be used to treat or prevent this disorder in animals undergoing exercise. For instance, horses may be administered CpG prior to or after a race to prevent or treat anemia.
- Fig. 2 shows changes in phenotype of spleen cells after stimulation with CpG-ODN.
- Fig. 3 shows CpG-ODN induced changes in splenic cell number, number of splenic and BM GM-CFU.
- A Kinetics of CpG-ODN (CGI) induced changes in splenic cell count (mean values of 3 C57BL/6 mice per time point ⁇ SD).
- B Evaluation of hematopoietic progenitor cells in the spleens of CpG-ODN-treated mice. Graph display number of GM-CFU per spleen per time point (mean values of triplicate spleen cell cultures of 3 mice ⁇ SEM).
- C Frequency of GM-CFU in pooled bone-marrow cells from 3 mice per time point.
- D Frequency of GM-CFU in pooled bone-marrow cells from 3 mice per time point.
- Fig. 4 shows a dose titration of CpG-ODN.
- CGI CpG- ODN
- LPS 10 ⁇ g/mouse, black bars
- solvent aqua ad injectable, white bars
- GC-ODN dark grey bars
- Fig. 7 shows an increased number of CM-CFU and enhanced CTL function after ODN-injection correlates with increased resistance towards lethal listeriosis in sublethally irradiated mice.
- A Increased number of GM-CFU per 1 million cells (left panel) and GM- CFU per spleen (right panel) at day 14 after sublethal irradiation (4 Gy) and injection of CpG- ODN (CGI). Number of splenic GM-CFU of 3 mice per group ( ⁇ SEM) with (+) and without (-) ODN injection was compared to normal mice without irradiation.
- B OVA-specific primary CTL-response using ODN CGI as adjuvant.
- CpG-ODN activate DC and macrophages in vitro to secrete large amounts of hematopoietically active cytokines including IL-6, GM-CSF, IL-1, IL-2 and TNF- ⁇ .
- Sparwasser, T et al. (1997) Nature 386:336- 337; Sparwasser, T et al. (1997) Eur J Immunol 27:1671-1679; Sparwasser, T et al. (1998) Eur J Immunol 28:2045-2054; Lipford, GB et al. (1997) Eur J Immunol 27:3420-3426; Halpern, MD et al. (1996) Cell Immunol 167:72-78; Chace, JH et al.
- CpG-ODN known to mimic the immunostimulatory effects of bacterial DNA (Krieg, AM et al. (1995) Nature 374:546-549) displayed the capacity to potentiate hematopoiesis. Furthermore, CpG-ODN was shown to enhance hematopoietic regeneration from myelosuppression as caused by sublethal irradiation. For example, irradiated and CpG-ODN treated mice exhibited increased numbers of splenic GM-CFU, mounted antigen specific CTL responses and displayed enhanced resistance to Listeria monocytogenes infection (Fig. 7).
- Example 2 CpG-ODN Induced Blood and Cell Resistance to 5-FIuorouracil (5-FU).
- Spleen Weight and Spleen Cell Count Spleens removed on days 0, 4, and 10 were trimmed of fat and contiguous tissues, and then weighed. They then were minced and dispersed for cell counting. Red blood cells were removed by NH 4 C1 lysis prior to cell counts. As shown in Fig. 8, spleens from animals treated with 5-FU plus CpG-ODN weighed more on days 4 and 10 following 5-FU treatment than did spleens from animals receiving 5-FU alone, and spleen cell counts tended to be higher and closer to normal in animals receiving combined treatment than in those receiving 5-FU alone. 2. Differential Splenic Lymphocyte Counts Following 5-FU with and Without CpG-
- mice were sacrificed and spleens harvested as in Example 2 for analysis. Spleens so obtained were subjected to an additional treatment with collagenase, yielding higher total numbers of splenocytes per spleen than obtained in Example 2. Splenocytes then were counted and aliquoted; an aliquot from each treatment group was stained with anti-CD 1 lc and anti-CD 1 lb for FACS analysis to quantitate total resident splenic DCs. As shown in the left panel of Fig.
- ATCGACTCTCGAGCGTTCTC SEQ ID NO: 7
- CAACGTT (SEQ ID NO: 31 )
- ACCATGGACGAACTGTTTCCCCTC (SEQ ID NO : 61 )
- ACCATGGACGAGCTGTTTCCCCTC (SEQ ID NO: 62)
Abstract
Description
Claims
Priority Applications (10)
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EP99928176A EP1078053B1 (en) | 1998-05-14 | 1999-05-14 | METHODS FOR REGULATING HEMATOPOIESIS USING CpG-OLIGONUCLEOTIDES |
IL13964699A IL139646A0 (en) | 1998-05-14 | 1999-05-14 | Methods for regulating hematopoiesis using cpg-oligonucleotides |
JP2000547969A JP2002514397A (en) | 1998-05-14 | 1999-05-14 | Methods for hematopoietic regulation using CpG oligonucleotides |
DE69927495T DE69927495T2 (en) | 1998-05-14 | 1999-05-14 | METHOD OF REGULATING HEMATOPOESIS BY USING CPG OLIGONUCLEOTIDES |
NZ508650A NZ508650A (en) | 1998-05-14 | 1999-05-14 | Regulating hematopoiesis using unmethylated C and G CpG-oligonucleotides with a phosphorothioate modification |
CA002328406A CA2328406A1 (en) | 1998-05-14 | 1999-05-14 | Methods for regulating hematopoiesis using cpg-oligonucleotides |
AU45288/99A AU760795B2 (en) | 1998-05-14 | 1999-05-14 | Methods for regulating hematopoiesis using CpG-oligonucleotides |
AT99928176T ATE305507T1 (en) | 1998-05-14 | 1999-05-14 | METHOD FOR REGULATING HEMATOPOIESIS USING CPG OLIGONUCLEOTIDES |
IL139646A IL139646A (en) | 1998-05-14 | 2000-11-13 | USE OF A CpG OLIGONUCLEOTIDE TO PREPARE A MEDICAMENT FOR INDUCING AN ANTIGEN - SPECIFIC IMMUNE RESPONSE |
IL187987A IL187987A0 (en) | 1998-05-14 | 2007-12-06 | Use of a cpg oligonucleotide to prepare a medicament for inducing an antigen-specific immune response |
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DE69927495D1 (en) | 2006-02-09 |
EP1078053A2 (en) | 2001-02-28 |
AU760795B2 (en) | 2003-05-22 |
EP1078053B1 (en) | 2005-09-28 |
US20070184465A1 (en) | 2007-08-09 |
US20040235778A1 (en) | 2004-11-25 |
EP1674574A1 (en) | 2006-06-28 |
JP2002514397A (en) | 2002-05-21 |
US20040235777A1 (en) | 2004-11-25 |
WO1999058118A3 (en) | 2000-01-13 |
US20040030118A1 (en) | 2004-02-12 |
US20040234512A1 (en) | 2004-11-25 |
IL139646A0 (en) | 2002-02-10 |
IL139646A (en) | 2008-03-20 |
CA2328406A1 (en) | 1999-11-18 |
AU4528899A (en) | 1999-11-29 |
ATE305507T1 (en) | 2005-10-15 |
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IL187987A0 (en) | 2008-03-20 |
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