WO2000018966A3 - A new strategy for genome-wide gene analysis: integrated procedures for gene identification - Google Patents

A new strategy for genome-wide gene analysis: integrated procedures for gene identification Download PDF

Info

Publication number
WO2000018966A3
WO2000018966A3 PCT/US1999/022975 US9922975W WO0018966A3 WO 2000018966 A3 WO2000018966 A3 WO 2000018966A3 US 9922975 W US9922975 W US 9922975W WO 0018966 A3 WO0018966 A3 WO 0018966A3
Authority
WO
WIPO (PCT)
Prior art keywords
genome
gene
wide
new strategy
identification
Prior art date
Application number
PCT/US1999/022975
Other languages
French (fr)
Other versions
WO2000018966A2 (en
Inventor
San Ming Wang
Scott Fears
Janet D Rowley
Original Assignee
Arch Dev Corp
San Ming Wang
Scott Fears
Janet D Rowley
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Arch Dev Corp, San Ming Wang, Scott Fears, Janet D Rowley filed Critical Arch Dev Corp
Priority to AU65070/99A priority Critical patent/AU6507099A/en
Publication of WO2000018966A2 publication Critical patent/WO2000018966A2/en
Publication of WO2000018966A3 publication Critical patent/WO2000018966A3/en

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6809—Methods for determination or identification of nucleic acids involving differential detection
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions

Abstract

The present invention is drawn to methods for genome-wide index in a particular cell type, and for genome-wide identification of differentially expressed genes. Also provided is an improved set of poly-dT primers anchored at their 3' ends.
PCT/US1999/022975 1998-09-29 1999-09-29 A new strategy for genome-wide gene analysis: integrated procedures for gene identification WO2000018966A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU65070/99A AU6507099A (en) 1998-09-29 1999-09-29 A new strategy for genome-wide gene analysis: integrated procedures for gene identification

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US10238198P 1998-09-29 1998-09-29
US60/102,381 1998-09-29

Publications (2)

Publication Number Publication Date
WO2000018966A2 WO2000018966A2 (en) 2000-04-06
WO2000018966A3 true WO2000018966A3 (en) 2000-07-27

Family

ID=22289541

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US1999/022975 WO2000018966A2 (en) 1998-09-29 1999-09-29 A new strategy for genome-wide gene analysis: integrated procedures for gene identification

Country Status (2)

Country Link
AU (1) AU6507099A (en)
WO (1) WO2000018966A2 (en)

Families Citing this family (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1254257A2 (en) * 1999-12-29 2002-11-06 Arch Development Corporation METHOD FOR GENERATION OF LONGER cDNA FRAGMENTS FROM SAGE TAGS FOR GENE IDENTIFICATION
DE10224200C1 (en) * 2002-05-31 2003-08-21 Artus Ges Fuer Molekularbiolog Replicating RNA, useful, after reverse transcription, for analysis on microarrays, comprises conversion to cDNA then reverse transcription of this to form antisense sequences
CN103911449B (en) * 2014-04-08 2015-08-12 上海交通大学 Based on the method for 3T-seq full-length genome surface analysis APA

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1993018176A1 (en) * 1992-03-11 1993-09-16 Dana-Farber Cancer Institute METHODS TO CLONE mRNA
US5545522A (en) * 1989-09-22 1996-08-13 Van Gelder; Russell N. Process for amplifying a target polynucleotide sequence using a single primer-promoter complex
US5807680A (en) * 1993-11-12 1998-09-15 The Scripps Research Institute Method for simulataneous identification of differentially expresed mRNAS and measurement of relative concentrations

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5545522A (en) * 1989-09-22 1996-08-13 Van Gelder; Russell N. Process for amplifying a target polynucleotide sequence using a single primer-promoter complex
WO1993018176A1 (en) * 1992-03-11 1993-09-16 Dana-Farber Cancer Institute METHODS TO CLONE mRNA
US5807680A (en) * 1993-11-12 1998-09-15 The Scripps Research Institute Method for simulataneous identification of differentially expresed mRNAS and measurement of relative concentrations

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
DIATCHENKO L ET AL: "SUPPRESSION SUBTRACTIVE HYBRIDIZATION: A METHOD FOR GENERATING DIFFERENTIALLY REGULATED OR TISSUE-SPECIFIC CDNA PROBES AND LIBRARIES", PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF USA,US,NATIONAL ACADEMY OF SCIENCE. WASHINGTON, vol. 93, 1 June 1996 (1996-06-01), pages 6025 - 6030, XP002911922, ISSN: 0027-8424 *
LIANG P ET AL: "DIFFERENTIAL DISPLAY OF EUKARYOTIC MESSENGER RNA BY MEANS OF THE POLYMERASE CHAIN REACTION", SCIENCE,US,AMERICAN ASSOCIATION FOR THE ADVANCEMENT OF SCIENCE,, vol. 257, no. 5072, 14 August 1992 (1992-08-14), pages 967 - 971, XP000508268, ISSN: 0036-8075 *
VELCULESCU V E ET AL: "SERIAL ANALYSIS OF GENE EXPRESSION", SCIENCE,US,AMERICAN ASSOCIATION FOR THE ADVANCEMENT OF SCIENCE,, vol. 270, 20 October 1995 (1995-10-20), pages 484 - 487, XP002053721, ISSN: 0036-8075 *

Also Published As

Publication number Publication date
WO2000018966A2 (en) 2000-04-06
AU6507099A (en) 2000-04-17

Similar Documents

Publication Publication Date Title
WO2000003683A3 (en) Liposomal encapsulated nucleic acid-complexes
WO2004044132A3 (en) Modified oligonucleotides for use in rna interference
WO2002077264A3 (en) Arrayed transfection method and uses related thereto
WO2000050639A3 (en) Gene sequence variations with utility in determining the treatment of disease
EP0385558A3 (en) Materials and methods for genome walking
PL322611A1 (en) Methods of obtaining l-amini acid by fermentation, dna as well as micro-organism
WO2004043978A3 (en) 2'-methoxy substituted oligomeric compounds and compositions for use in gene modulations
WO1999036511A3 (en) Feline immunodeficiency virus gene therapy vectors
AU4818599A (en) Mammalian genes; dendritic cell prostaglandin-like transponder (dc-pgt), hdtea84, hsljd37r and rankl, hcc5 chemokine, deubiquitinating 11 and 12 (dub11, dub12),md-1, md2 and cyclin e2, related reagents and methods
WO1997025416A3 (en) Novel dna glycosylases and their use
AU2001271438A1 (en) Method for separation, identification and evaluation of microbes and cells
FR2723950B1 (en) NUCLEOTIDE FRAGMENTS CAPABLE OF SPECIFICALLY HYBRIDIZING WITH RICKETTSIA DNA OR RNA AND THEIR USE AS PROBES OR PRIMERS.
WO2001041815A3 (en) Metastasis genes and uses thereof
WO2002006537A3 (en) Methods of identifying renal protective factors
WO2000018966A3 (en) A new strategy for genome-wide gene analysis: integrated procedures for gene identification
WO2001062965A3 (en) Differential expression screening method
AU2362795A (en) Introduction of HIV-protective genes into cells by particle-mediated gene transfer
WO2000020450A3 (en) Calcium channel alpha-2/delta gene
AU2001292794A1 (en) Detection of unlabeled hybridized dna and rna using restriction enzyme digestion
AU4255899A (en) Method for non-radioactive detection of membrane-bonded nucleic acids and test kit
WO2003089617A3 (en) Methods for increasing homologous recombination of a nucleic acid sequence
AU2001249245A1 (en) Identification of in vivo dna binding loci of chromatin proteins using a tethered nucleotide modification enzyme
WO1998023775A3 (en) DNA for evaluating the progression potential of cervical lesions
WO1997035993A3 (en) PSA positive regulating (PSAR) sequences and uses thereof
WO2001036463A3 (en) Genes specifically expressed in human dendritic cells

Legal Events

Date Code Title Description
ENP Entry into the national phase

Ref country code: AU

Ref document number: 1999 65070

Kind code of ref document: A

Format of ref document f/p: F

AK Designated states

Kind code of ref document: A2

Designated state(s): AE AL AM AT AU AZ BA BB BG BR BY CA CH CN CR CU CZ DE DK DM EE ES FI GB GD GE GH GM HR HU ID IL IN IS JP KE KG KP KR KZ LC LK LR LS LT LU LV MD MG MK MN MW MX NO NZ PL PT RO RU SD SE SG SI SK SL TJ TM TR TT TZ UA UG US UZ VN YU ZA ZW

AL Designated countries for regional patents

Kind code of ref document: A2

Designated state(s): GH GM KE LS MW SD SL SZ TZ UG ZW AM AZ BY KG KZ MD RU TJ TM AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE BF BJ CF CG CI CM GA GN GW ML MR NE SN TD TG

121 Ep: the epo has been informed by wipo that ep was designated in this application
DFPE Request for preliminary examination filed prior to expiration of 19th month from priority date (pct application filed before 20040101)
AK Designated states

Kind code of ref document: A3

Designated state(s): AE AL AM AT AU AZ BA BB BG BR BY CA CH CN CR CU CZ DE DK DM EE ES FI GB GD GE GH GM HR HU ID IL IN IS JP KE KG KP KR KZ LC LK LR LS LT LU LV MD MG MK MN MW MX NO NZ PL PT RO RU SD SE SG SI SK SL TJ TM TR TT TZ UA UG US UZ VN YU ZA ZW

AL Designated countries for regional patents

Kind code of ref document: A3

Designated state(s): GH GM KE LS MW SD SL SZ TZ UG ZW AM AZ BY KG KZ MD RU TJ TM AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE BF BJ CF CG CI CM GA GN GW ML MR NE SN TD TG

REG Reference to national code

Ref country code: DE

Ref legal event code: 8642

122 Ep: pct application non-entry in european phase