WO2003028737A1 - Anti-viral agents and in-vitro method for the identification of candidates able to inhibit binding of polymerase to epsilon - Google Patents

Anti-viral agents and in-vitro method for the identification of candidates able to inhibit binding of polymerase to epsilon Download PDF

Info

Publication number
WO2003028737A1
WO2003028737A1 PCT/JP2002/008799 JP0208799W WO03028737A1 WO 2003028737 A1 WO2003028737 A1 WO 2003028737A1 JP 0208799 W JP0208799 W JP 0208799W WO 03028737 A1 WO03028737 A1 WO 03028737A1
Authority
WO
WIPO (PCT)
Prior art keywords
group
viral
agent according
viral agent
rna
Prior art date
Application number
PCT/JP2002/008799
Other languages
French (fr)
Inventor
Satoshi Yuasa
Naohiro Kamiya
Original Assignee
Mitsubishi Pharma Corporation
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Mitsubishi Pharma Corporation filed Critical Mitsubishi Pharma Corporation
Priority to JP2003532069A priority Critical patent/JP2005508924A/en
Publication of WO2003028737A1 publication Critical patent/WO2003028737A1/en

Links

Classifications

    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/66Phosphorus compounds
    • A61K31/675Phosphorus compounds having nitrogen as a ring hetero atom, e.g. pyridoxal phosphate
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/66Phosphorus compounds
    • A61K31/683Diesters of a phosphorus acid with two hydroxy compounds, e.g. phosphatidylinositols
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K45/00Medicinal preparations containing active ingredients not provided for in groups A61K31/00 - A61K41/00
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • A61P31/20Antivirals for DNA viruses
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/5308Immunoassay; Biospecific binding assay; Materials therefor for analytes not provided for elsewhere, e.g. nucleic acids, uric acid, worms, mites
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2333/00Assays involving biological materials from specific organisms or of a specific nature
    • G01N2333/005Assays involving biological materials from specific organisms or of a specific nature from viruses
    • G01N2333/01DNA viruses
    • G01N2333/02Hepadnaviridae, e.g. hepatitis B virus
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2333/00Assays involving biological materials from specific organisms or of a specific nature
    • G01N2333/90Enzymes; Proenzymes
    • G01N2333/91Transferases (2.)
    • G01N2333/912Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • G01N2333/91205Phosphotransferases in general
    • G01N2333/91245Nucleotidyltransferases (2.7.7)
    • G01N2333/9125Nucleotidyltransferases (2.7.7) with a definite EC number (2.7.7.-)
    • G01N2333/91255DNA-directed RNA polymerase (2.7.7.6)
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2500/00Screening for compounds of potential therapeutic value
    • G01N2500/02Screening involving studying the effect of compounds C on the interaction between interacting molecules A and B (e.g. A = enzyme and B = substrate for A, or A = receptor and B = ligand for the receptor)

Definitions

  • the present invention relates to an anti-viral agent showing a novel pharmacological action. More specifically, the present invention relates to an anti-viral agent which exerts an inhibitory mechanism of action against activation of viral polymerase via RNA binding. Moreover, the present invention also relates to a method for screening an anti- viral agent by evaluating inhibition of activation of viral polymerase via RNA binding.
  • Hepatitis B virus is a causative agent of an acute or chronic hepatitis B. It is estimated that there are more than 3G0 million HBV carriers throughout the world, and therefore a disease from HBV infection, hepatitis B, is considered to be a serious disease, and has been listed as one of the 10 leading causes of death in the world (World Heath Organization warns of growing "crisis of suffering" http://www.who.int/whr/1997/presse.htm).
  • HBV can infect and replicate only in humans and chimpanzees, a woodchuck hepatitis virus (WHV) and a duck hepatitis B virus (DHBV), which are belonging to Hepadnaviridae like HBV, are recognized as important models of hepadnavirus infection and are used in studies regarding the replication of hepadnaviruses, including searches for the antiviral agents.
  • WBV woodchuck hepatitis virus
  • DHBV duck hepatitis B virus
  • the hepadnavirus uses a pregenome RNA (pgRNA), which encodes its own core protein and polymerase (POL), as an intermediate for replication of its own viral DNA by RNA-dependent DNA polymerase activity of the POL (Cell, Summers and Mason, Vol. 29, 403-415 (1982)).
  • pgRNA pregenome RNA
  • POL polymerase
  • the POL recognizes and binds to a ⁇ motif, a secondary structure of RNA which locates near the 5 '-terminus on a pgRNA, and then viral core particles are formed by encapsidation with core proteins (The EMBO J., Bartenschlager and Schaller, Vol.ll, No.9, 3413-3420 (1992)).
  • DHBV POL is expressed by an in vitro translation system using a rabbit reticulocyte lysate, and then deoxynucleoside triphosphates (dNTPs) are added to a POL- ⁇ RNA complex in the solution to perform priming reaction, followed by detection of POL covalently bonded to labeled dNTP.
  • dNTPs deoxynucleoside triphosphates
  • An object of the present invention is to search for and identify a medicament which inhibits activation of viral polymerase via RNA binding. Another object of the present invention is to provide an anti-viral agent using a medicament which inhibits activation of viral polymerase via RNA binding. A further object of the present invention is to provide a method for screening a medicament which inhibits activation of viral polymerase via RNA binding.
  • a test medicament is added after formation of a POL- ⁇ RNA complex to analyze competitive action with dNTP.
  • the present inventors have improved the conventional experiment system by providing separately each of POL, ⁇ RNA and adding a test medicament before formation of a POL- ⁇ RNA complex, and thereby succeeded to find an inhibitory activity of a compound which did not show the inhibitory activity in the conventional experiment system, The present inventors also succeeded in identifying a novel inhibitory mechanism of viral polymerase, thereby completing the present invention.
  • an anti-viral agent comprising, as an active ingredient, a medicament which inhibits activation of viral polymerase via RNA binding.
  • activation of viral polymerase via RNA binding is activation of viral polymerase via binding of virus RNA and viral polymerase.
  • RNA is ⁇ RNA
  • a pharmacological efficacy is sustained after withdrawing the agent.
  • the virus belongs to Hepadnaviridae, and particularly preferably the virus is a hepatitis B virus.
  • the anti-viral agent wherein the medicament is a phosphonate nucleotide compound represented by the following formula (I) or a salt thereof, or a hydrate or solvate thereof:
  • R is a hydroxyl group or a C ⁇ -C 6 alkoxy group; each of R and R is independently a hydrogen atom, a -C 22 alkyl group, an acyloxymethyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms; R 4 is a hydrogen atom, a C 1 -C 4 alkyl group, a C ⁇ -C 4 hydroxyalkyl group, or a C ⁇ -C 4 alkyl group substituted by one or more halogen atoms; and X is CH or a nitrogen atom.
  • R 1 is a hydroxyl group or a methoxy group.
  • each of R 2 and R 3 is independently a hydrogen atom, a C1-C 22 alkyl group, or an ethyl group substituted by one or more halogen atoms.
  • each of R 2 and R 3 is independently a hydrogen atom or a 2,2,2-trifluoroethyl group.
  • R 4 is a hydrogen atom or a methyl group.
  • X is CH.
  • R 1 is a hydroxyl group or a methoxy group
  • each of R 2 and R is independently a hydrogen atom or a 2,2,2-trifluoroethyl group
  • R is a hydrogen atom
  • X is CH.
  • the medicament is
  • a method for screening an anti- viral agent which comprises a step of evaluating activation of viral polymerase via RNA binding.
  • the step of evaluating activation of viral polymerase via RNA binding is that of evaluating the degree of binding of virus RNA and viral polymerase.
  • the method for screening an anti-viral agent comprises steps of adding a test medicament to viral polymerase, adding virus RNA, and evaluating the degree of binding of virus RNA and viral polymerase.
  • the method for screening an anti-viral agent comprises steps of adding a test medicament to viral polymerase, adding virus RNA, and judging that the test medicament is an anti- viral agent when the test medicament inhibits the binding of virus RNA and viral polymerase.
  • RNA is ⁇ RNA.
  • the virus belongs to Hepadnaviridae.
  • the virus is a hepatitis B virus.
  • an anti- viral agent obtained by the method for screening an anti- viral agent according to the present invention.
  • an anti-viral agent obtained by the steps of conducting the method for screening an anti-viral agent according to the present invention to obtain an anti-viral substance, producing the thus obtained anti-viral substance by chemical synthesis, and mixing the anti- viral substance with a pharmaceutically acceptable carrier.
  • a method for inhibiting a virus which comprises administration of a pharmacologically effective amount of medicament inhibiting a process where viral polymerase is activated via binding of virus RNA and viral polymerase, to mammals including a human.
  • a medicament inhibiting a process where viral polymerase is activated via binding of virus RNA and viral polymerase, for the production of an anti- viral agent.
  • Figure 1 shows a schematic diagram of a plasmid construct.
  • A shows DHBV POL3' ⁇ used in the conventional method
  • B shows DHBV POL ⁇ (-) used in the improved method for the preparation of POL
  • C shows DHBV 5' ⁇ " used in the improved method as ⁇ RNA
  • D shows DHBV HIS-TP used in the improved method for the preparation of Terminal Protein (TP)
  • E shows DHBV ⁇ TP-POL ⁇ (-) used in the improved method for the preparation of TP-deleted POL.
  • FIG. 2 shows test results obtained by the conventional method.
  • Figure 3 shows test results in respect of RNA concentration dependency by an improved method.
  • Figure 4 shows results of ⁇ RNA competition tests obtained by an improved method.
  • Figure 5 shows test results in respect of the analysis of POL level dependency by an improved method.
  • Figure 6 shows results of study of the TP or ⁇ RNA concentration dependency.
  • Figure 7 shows results of inhibitory activity of medicament against TP as protein primer during the formation of TP- ⁇ TP POL- ⁇ RNA complex.
  • the anti-viral agent of the present invention is characterized in that it comprises, as an active ingredient, a medicament which inhibits a process where viral polymerase is activated via binding of virus RNA and viral polymerase, and preferably that the pharmacological efficacy is sustained after withdrawing the agent.
  • medicaments include the phosphonate nucleotide compound of the above formula (I) or a salt thereof, or a hydrate or solvate thereof, and the lik .
  • examples of a C ⁇ -C 6 alkoxy group represented by R 1 include a methoxy group, an ethoxy group, an n-propyloxy group, an isopropyloxy group, an n-butyloxy group, an isobutyloxy group, a sec-butyloxy group, a tert-butyloxy group, a pentyloxy group, a hexyloxy group, and the like.
  • examples of a C 1 -C 22 alkyl group represented by R 2 and R 3 include a methyl group, an ethyl group, an n-propyl group, an isopropyl group, an n-butyl group, an isobutyl group, a sec-butyl group, a tert-butyl group, a pentyl group, a hexyl group, a heptyl group, an octyl group, a nonyl group, a decyl group, an undecyl group, a dodecyl group, a tridecyl group, a tetradecyl group, a pentadecyl group, a hexadecyl group, a heptadecyl group, an octadecyl group, a nonadecyl group, an i
  • Examples of an acyloxymethyl group represented by R 2 and R 3 include an acetyloxymethyl group, a propionyloxymethyl group, a butyryloxymethyl group, an isobutyryloxymethyl group, a valeryloxymethyl group, an isovaleryloxymethyl group, a pivaloyloxymethyl group, and the like.
  • Examples of an acylthioethyl group represented by R 2 and R 3 include an acetylthioethyl group, a propionylthioethyl group, a butyrylthioethyl group, an isobutyrylthioethyl group, a valerylthioethyl group, an isovalerylthioethyl group, a pivaloylthioethyl group, and the like.
  • the type of the halogen atom may be any of a fluorine, chlorine, bromine or iodine atom.
  • Examples of an ethyl group substituted by one or more halogen atoms include a 1-fluoroethyl group, a 2-fluoroethyl group, a 1-chloroethyl group, a 2-chloroethyl group, a 2-bromoethyl group, a 2,2-difluoroethyl group, a 2,2-dichloroethyl group, a 2,2-dibromoethyl group, a 2,2,2-trifluoroethyl group, a 2,2,2-trichloroethyl group, a 2,2,2-tribromoethyl group, and the like. It is particularly preferred that the 2-position of an ethyl group is substituted
  • R 9 atom is a fluorine atom.
  • At least one of R and R is preferably an ethyl group substituted by one or more halogen atoms, and particularly preferably 2,2,2-trifluoroethyl group.
  • Examples of a C ⁇ -C alkyl group represented by R include a methyl group, an ethyl group, an n-propyl group, an isopropyl group, an n-butyl group, an isobutyl group, a sec-butyl group, a tert-butyl group, and the like.
  • Ci-C 4 hydroxyalkyl group represented by R 4 examples include a hydroxymethyl group, a 1-hydroxyethyl group, a 2-hydroxyethyl group, a 1-hydroxypropyl group, a 2-hydroxypro ⁇ yl group, a 3-hydroxypropyl group, a 1-hydroxybutyl group, a 2-hydroxybutyl group, a 3-hydroxybutyl group, a 4-hydroxybutyl group, and the like.
  • Examples of a - alkyl group substituted by one or more halogen atoms represented by R 4 include a group in which a halogen atom(s) such as a fluorine atom or a chlorine atom is/are bound to a methyl group, an ethyl group, an n-propyl group, an isopropyl group, an n-butyl group, an isobutyl group, a sec-butyl group, a tert-butyl group, and the like.
  • a halogen atom(s) such as a fluorine atom or a chlorine atom
  • Such a group include a fluoromethyl group, a difluoromethyl group, a trifluoromethyl group, a fluoroethyl group, a chloroethyl group, a fluoropropyl group, a chloropropyl group, a fluorobutyl group, a chlorobutyl group, and the like.
  • the first condition for the preferred compound of the present invention is that each of R 2 and R 3 is independently a hydrogen atom, a -C2 alkyl group or an ethyl group substituted by one or more halogen atoms.
  • the second condition for the preferred compound of the present invention is that R 2 and R 3 is independently a hydrogen atom, a -C 22 alkyl group or a 2,2,2-trifluoroethyl group, and R 4 is a hydrogen atom or a methyl group.
  • Examples of specific preferred compounds satisfying such conditions include the following compounds:
  • each of R 2 and R 3 is a 2,2,2-trifluoroethyl group and R 4 is a hydrogen atom or a methyl group.
  • preferred compounds satisfying such conditions include the following compounds: 2-arruno-6-(4-memoxyphenylthio)-9-[2-(phosphonome oxy)ethyl]purine bis(2,2,2- trifluoroethyl) ester;
  • the fourth condition for the preferred compound of the present invention is that R 1 is a hydroxyl group, each of R 2 and R 3 is a 2,2,2-trifluoroethyl group, and R 4 is a hydrogen atom.
  • R 1 is a hydroxyl group
  • R 2 and R 3 is a 2,2,2-trifluoroethyl group
  • R 4 is a hydrogen atom. Examples of preferred compounds satisfying such conditions include the following compounds:
  • the phosphonate nucleotide compound of the above formula (I) of the present invention may exist as a salt, and any salt formed by the above compound can be used as an active ingredient of the anti-viral agent of the present invention.
  • a salt include a pharmaceutically acceptable salt.
  • the acidic group is able to form metal salts such as a lithium salt, a sodium salt, a potassium salt, a magnesium salt and a calcium salt, and ammonium salts such as an ammonium salt, a methyl ammonium salt, a dimethyl ammonium salt, a trimethyl ammonium salt and dicyclohexyl ammonium salt.
  • the arnino group is able to form mineral acid salts such as hydrochloride, hydrobromide, sulfate, nitrate, phosphate and metaphosphate, and organic acid salts such as methanesulfonate, benzenesulfonate, para-toluenesulfonate, acetate, propionate, tartrate, fumarate, maleate, malate, oxalate, succinate, citrate, benzoate, mandelate, cinnamate, lactate, besylate, valerate, stearate, oleate, lactobionate, ethylsuccinate, semisuccinate, butyrate, palmitate, carbamate, gluconate, laurate, salicylate, laokurate, tannate and butylsulfonate.
  • mineral acid salts such as hydrochloride, hydrobromide, sulfate, nitrate, phosphate and metaphosphate
  • the phosphonate nucleotide compound of the above formula (I) and salt thereof may exist in the form of a hydrate or solvate. Any given hydrate or solvate which is formed by the phosphonate nucleotide compound of the above formula (I) or salt thereof, can be used as an active ingredient of the medicament of the present invention.
  • a solvent capable of forming the solvate include methanol, ethanol, isopropanol, acetone, ethyl acetate, methylene chloride, diisopropyl ether, and the like.
  • each of R 2 and R 3 is a C 1 -C 22 alkyl group, or an ethyl group substituted by one or more halogen atoms
  • the compound can be synthesized, for example, according to the following reaction route (1) or (2).
  • R 1 , R 4 and X are the same as defined above, R 5 represents a -C 22 alkyl group, or an ethyl group substimted by one or more halogen atoms, and W represents a leaving group such as a halogen atom, a para-toluenesulfonyloxy group, a methanesulfonyloxy group or a trifluoromethanesulfonyloxy group.
  • the compound of the above formula (II) is reacted with the compound of the above formula (ffl) at a temperature of 10°C to 250°C, preferably 130°C to 200°C, for 0.1 to 100 hours, preferably for 3 to 24 hours.
  • the compound of the above formula (TV) obtained by the above reaction can be separated and purified by ordinary separation and purification means such as distillation-, adsorption- or partition-chromatographies, as necessary.
  • the compound of the above formula (IV) may be separated and purified as stated above, or it may directly be used for the following reaction without purification.
  • the compound of the above formula (IV) is reacted with the compound of the above formula (V) in the presence of a base such as sodium carbonate, potassium carbonate, cesium carbonate, sodium hydrate, potassium hydrate, trie ylamine and diazabicycloundecen in a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone at a temperature of 10°C to 200°C, preferably 50°C to 150°C, for 0.1 to 100 hours, preferably for 1 to 10 hours, to obtain the compound of the above formula (F).
  • a base such as sodium carbonate, potassium carbonate, cesium carbonate, sodium hydrate, potassium hydrate, trie ylamine and diazabicycloundecen
  • a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone
  • the source of the compounds of the above formulas (II), (HI) and (V) which are raw materials for reaction route (1) is not particularly limited.
  • a compound commercially available as a reagent may be used, or a compound may be synthesized by a known method, as appropriate.
  • the compound of the above formula (V) can be synthesized by heating the compound of the formula (VI) and the compound of the formula (VET) which are described later, in a suitable solvent such as acetonitrile or dimethylsulfoxide at a range of 50°C to 100°C.
  • the compound of the above formula (I') can also be produced by the following method.
  • R 1 , R 4 , R 5 , X and W are the same as defined above.
  • the compound of the above formula (IV) obtained by reaction route (1) is reacted with the compound of the above formula (VI) in the presence of a base such as sodium carbonate, potassium carbonate, cesium carbonate, sodium hydrate, potassium hydrate, triemylamine and diazabicycloundecen in a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone at a temperature of 10°C to 200°C, preferably 50°C to 150°C for 0.1 to 100 hours, preferably for 0.5 to 10 hours, to obtain the compound of the above formula (VII).
  • a base such as sodium carbonate, potassium carbonate, cesium carbonate, sodium hydrate, potassium hydrate, triemylamine and diazabicycloundecen
  • a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone
  • the compound of the above formula (NH) is reacted with a mercaptan represented by the above formula (NHJ) or a salt thereof such as a sodium salt, a potassium salt, a lithium salt or a triemylamine salt, in a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimemylformamide or methylpyrrolidone optionally in the presence of a suitable tertiary amine at a temperature of 10°C to 200°C, preferably 70°C to 120°C for 0.1 to 100 hours, preferably for 0.5 to 12 hours, to obtain the compound of the above formula (F).
  • a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimemylformamide or methylpyrrolidone
  • a suitable tertiary amine at a temperature of 10°C to 200°C, preferably 70°C to 120°C for 0.1 to 100
  • the compound of the formula (F) corresponds to a compound of the formula (I) wherein each of R 2 and R 3 is a C 1 -C 22 alkyl group, or an ethyl group substituted by one or more halogen atoms.
  • the source of the compound of the above formula (NT) which is a raw material of reaction route (2) is not particularly limited.
  • a compound commercially available as a reagent may be used, or the compound may be synthesized by a known method as appropriate.
  • a compound of the formula (I) wherein R 3 is a hydrogen atom, a -C 22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms, and R 2 is a C 1 -C 22 alkyl group, or an ethyl group substituted by one or more halogen atoms, can be obtained by reaction of the compound of the above formula (F) with the compound of the formula (IX): R 6 OH wherein R 6 is a hydrogen atom, a -C 2 2 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms, in no solvent or in a suitable solvent including a chloric solvent such as dichloromethane; pyridine; acetonitrile; tetrahydrofuran; dimethylsulfoxide; dimethylformamide and methylpyrrolidone, optional
  • R 1 , R 4 , R 5 , R 6 and X are the same as defined above.
  • a compound of the formula (I) wherein each of R 2 and R 3 is independently a hydrogen atom, a -C 22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms can also be obtained by the following method.
  • R 1 , R 4 and X are the same as defined above, and each of R 7 and R 8 is independently a hydrogen atom, a -C 22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms, with the exception that both R 7 and R 8 can not represent hydrogen atoms at the same time.
  • the compound of the above formula (I") is reacted with trime ylsilyldiemyla ⁇ iine in a suitable solvent such as dichloromethane, dichloroethane and chloroform around room temperature for about 1 hour. More than two moles of trime ylsUyldiemylamine are used per mole of the compound of the above formula (I").
  • reaction solution is concentrated to dryness, the residue is dissolved into a suitable solvent, for example, a chloric solvent such as dichloromethane, and then oxalyl chloride is added in an amount of 2 or more moles per mole of the compound of the above formula (I"), followed by reaction on ice for about 1 hour, and then around room temperature for about 1 hour in the presence of a catalytic amount of dimethylformamide.
  • a suitable solvent for example, a chloric solvent such as dichloromethane
  • the compound of the above formula (X) obtained by removal of the solvent, usually without being purified, is reacted with the compound of the formula (XI) and/or the compound of the formula (XII) in a suitable solvent, for example, a chloric solvent such as dichloromethane, pyridine, acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone, at a temperature of 10°C to 100°C, preferably 20°C to 30°C for 0.1 to 100 hours, preferably 5 to 12 hours.
  • a chloric solvent such as dichloromethane, pyridine, acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone
  • the obtained compound of the formula (XIII) corresponds to a compound of the formula (I) wherein each of R 2 and R 3 is independently a hydrogen atom, a C1-C 22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms with the exception that both R 2 and R 3 can not represent hydrogen atoms at the same time.
  • the compound of the above formula (I") which is a raw material of the above reaction, can be obtained by hydrolysis of the compound of the formula (F), or it can be more efficiently obtained by reaction of a compound of the formula (F) wherein R 5 is a -C 22 alkyl group with triethyliodosilane, trimethylbromosilane and the like.
  • a compound of the formula (I) wherein each of R 2 and R 3 is an acyloxymethyl group, or wherein either one of R 2 and R 3 is an acyloxymethyl group and the other is hydrogen, can be obtained by reaction of the compound of the above formula (I") with an acyloxymethyl halide represented by the following formula (XrV): R 9 Y wherein R 9 is an acyloxymethyl group and Y is a chlorine, bromine or iodine atom, in the presence of a base such as sodium carbonate, potassium carbonate, cesium carbonate, sodium hydride, potassium hydride, triethylamine, pyridine, diazabicycloundecen and N,N'-dichlorohexyl-4-morpholinecarboxamidine in a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone at a temperature of 0°C to 200°C,
  • the compound of the formula (XrV) may be reacted with the compound of the formula (I") in an amount of 2 moles per mole of the compound of the formula (I"), while in the case of a compound wherein either one is an acyloxymethyl group, an equivalent mole reaction may be applied.
  • a compound wherein either one of R 2 and R 3 is an acyloxymethyl group, and the other is a -C22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms can be produced by preparing a compound wherein either one of R 2 and R 3 is a C1-C 22 alkyl group, an acylthioethyl, group or an ethyl group substituted by one or more halogen atoms, and the other is a hydrogen atom, and then reacting the compound of the above formula (XIV) to this compound by the above method.
  • the salt of the compound of the formula (I) can be synthesized, for example, by the following method.
  • the compound of the formula (F) is reacted with a corresponding acid with stirring at a temperature of -10°C to 100°C, preferably 10°C to 50°C for 0.1 to 20 hours, preferably for 0.3 to 1 hour in a suitable solvent such as ethyl acetate, isopropanol, acetonitrile, tetrahydiOfuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone.
  • a suitable solvent such as ethyl acetate, isopropanol, acetonitrile, tetrahydiOfuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone.
  • the above production method is provided as an example of a method for producing the compound of general formula (I), and so the method for producing the compound used in the present invention is not limited thereto.
  • the compound of the above formula (I) produced by the above method or a salt thereof can be separated and purified by ordinary nucleotide separation and purification means, e.g., by selecting and applying means such as recrystallization-, adsorption-, ion exchange- and partition- chromatographies, as appropriate.
  • a target virus to which the anti-viral agent of the present invention is applicable is not particularly hmited, and specific examples of the target virus include an RNA virus such as human immunodeficiency virus, influenza virus and hepatitis C virus; and a DNA virus such as herpes simplex virus type 1 and type 2, cytomegalovirus, varicella-zoster virus and hepatitis B virus, with hepatitis B virus being more preferable.
  • RNA virus such as human immunodeficiency virus, influenza virus and hepatitis C virus
  • a DNA virus such as herpes simplex virus type 1 and type 2, cytomegalovirus, varicella-zoster virus and hepatitis B virus, with hepatitis B virus being more preferable.
  • the compound of the formula (I) may be used singly, but it is preferred that, using a pharmacologically acceptable pharmaceutical additive, a pharmaceutical composition comprising the above compound as an active ingredient is produced and administered.
  • the composition of the pharmaceutical composition is determined by the solubility of the compound, chemical properties, administration route, dosage regimen and the like.
  • the compound can be orally administered in an dosage form of a granule, a parvule, a powder, a tablet, a hard syrup, a soft capsule, a troche, a syrup, an emulsion, a soft gelatine capsule, a gel, a paste, a suspension, a liposome and the like, or the compound can be administered intravenously, intramuscularly or subcutaneously in the form of an injection.
  • the compound may be formulated into powders for injection, and a solution may be prepared before use.
  • an organic or inorganic, solid or liquid carrier which is suitable for oral, enteral, parenteral or local administration
  • a solid carrier used for the production of a solid formulation include lactose, sucrose, starch, talc, cellulose, dextrin, kaoline, calcium carbonate, agar, pectin, stearic acid, magnesium stearate, lecithin, and sodium chloride.
  • a liquid carrier used for the production of a liquid formulation for oral administration include glycerine, peanut oil, polyvinylpyrrolidone, olive oil, ethanol, benzyl alcohol, propylene glycol, physiological saline, and water.
  • the above pharmaceutical composition can also comprise, in addition to the above carriers, an adjuvant such as a wetting agent, a suspension aid, a sweetener, a flavor, a coloring agent and a preservative.
  • a liquid agent may be contained in a capsule of a substance which can be absorbed, such as gelatin.
  • a solvent or a suspending agent which is used for the production of a formulation for parenteral administration such as an injection, include water, propylene glycol, polyethylene glycol, benzyl alcohol, ethyl oleate, and lecithin.
  • the compound of the formula (T), especially the ester derivative of the above formula (F) has a high oral absorbency, and therefore oral administration is a preferred administration route for the anti- viral agent of the present invention.
  • the preparation of each of the above formulation can be carried out according to standard techniques.
  • the anti- viral agent of the present invention is used for oral administration, the clinical dose is generally 0.1 to 500mg of the compound per kg adult per day, and preferably 0.1 to 50mg of the compound per kg adult per day. The dose may be changed as appropriate, depending on age, disease condition, symptom, the presence or absence of concurrent administration and the like.
  • the above dose may be applied once a day or divided over two to several administrations per day at regular intervals, or may also be applied intermittently every several days.
  • the applied dose is 0.01 to 50mg of the compound per kg adult per day, preferably 0.1 to 5mg per kg.
  • the present invention is further described in the following examples.
  • the present invention is not limited to the Examples.
  • the compound numbers in the Examples correspond to those in Table 1.
  • 2-(phosphonomethoxy)ethyliodo bis(2,2,2-trifluoroethyl) ester was added to the above reaction solution, and the mixture was reacted at 100°C for 5 hours. After reaction, the mixture was cooled to room temperature, followed by concentration to dryness. The residue was dissolved in chloroform, and was then adsorbed to a silica gel column followed by elution with 5%-methanol-chloroform to obtain 23.3g (yield 56%) of 2-an ⁇ o-6-chloro-9-[2-(phosphonomemoxy)emyl]purme bis(2,2,2-trifluoroethyl) ester.
  • 2-amino-6-chloro-9- [2-(phosphonomethoxy)ethyl]purine bisisopropyl ester was obtained by the same process as in Example 1, with the only exception being that triisopropylphosphate was used for substitution of Tris(2,2,2-trifluoroethyl)phosphate.
  • FIG. 1 The schematic diagram of plasmid constructs used in this test is shown in Figure 1.
  • Each of the plasmid constructs has a T7, T3 or Sp6 promoter region upstream of a region encoding an RNA of interest.
  • an RNA of interest was obtained.
  • both a region encoding POL and a ⁇ motif exist in the same RNA.
  • an RNA encoding POL and another RNA having a ⁇ motif were synthesized separately. Free nucleotides were removed from the obtained RNA products by MicroSpin S-300HR column (Amersham), and the concentration of RNA was adjusted with nuclease-free water.
  • the oral prodrug of phosphonomethoxyethyl adenine (PMEA; general name: adefovir) is undergoing a clinical test for an anti-HBN agent; and the diphosphorylated form of PMEA (PMEApp) competes with dATP and proved to be an active metabolite of PMEA.
  • PMEApp diphosphorylated form of PMEA
  • compound A (2-amino-6-(4-hydroxyphenylthio) 9-[2-(phosphonomethoxy)ethyl]purine) (described in Japanese Patent Application Laid-Open (Kokai) No. 9-255695 (Japanese Patent No. 3148139)
  • ⁇ RNA obtained from the construct shown in Figure 1C was added to the solution at final concentration of 500 to 5.12nM and the mixture was further incubated at 30°C for 60 minutes.
  • 50mM Tris-hydrochloride buffer (pH7.5) 15mM NaCl and lOmM MgCl 2 at final concentration were added, and [ a 32P]-dGTP (600Ci/mmol) was further added thereto at final concentration of 1.6 ⁇ M to prepare the mixture of a final volume of 5 ⁇ 1, followed by incubation at 30°C for 30 minutes.
  • test by the improved method was carried out by preparing POL according to the above-described method, adding cycloheximide thereto at final concentration of lmM, and further adding a test medicament, followed by incubation at 30°C for 15 to 30 minutes.
  • the test medicament used in the present invention were compound A (2-ammo-6-(4-memoxyphenylmio)-9-[2-(phosphonomethoxy)ethyl]purine) (described in Japanese Patent Application Laid-Open (Kokai) No. 9-255695 (Japanese Patent No.
  • RNA was added thereto and the mixture was further incubated at 30°C for 60 minutes.
  • 50mM Tris-hydrochloride buffer (pH7.5), 15mM NaCl and lOmM MgCl 2 at final concentration were added to 2.5 ⁇ 1 of the obtained reaction solution, and dNTP was further added thereto to obtain the mixture of a final volume of 5 ⁇ 1, followed by incubation at 30°C for 30 minutes.
  • either [ 32P] labeled dATP or dGTP with a specific activity of 400 to l,000Ci/mmol was prepared and used.
  • Terminal Protein (TP) region to which deoxynucleotide is bound is bound
  • Reversetranscriptase (RT) region having a reversetranscriptase activity is present on POL of Hepadnaviridae virus.
  • TP region and a region other than TP on POL were translated from the separate RNAs by using the constructs shown in Figure 1 D and E, and the formation of TP- ⁇ TP POL- ⁇ RNA complex was investigated.
  • RNA derived from the construct of Figure IE was fixed to be l.O g/ l and the final concentration of RNA derived from the construct of Figure ID is adjusted to be 1.0 to 0.2 ⁇ g/ ⁇ 1.
  • ⁇ RNA obtained from the construct of Figure 1C was added to the obtained solution at a final concentration of 600 to 20 nM in 1/10 volume, and the mixture was incubated at 30°C for 60 minutes.
  • Inhibitory activity of medicament against the formation of TP- ⁇ TP POL- ⁇ RNA complex was assayed by performing the aforementioned translation reaction in the presence of a test medicament to bind ⁇ RNA at a concentration of lOOnM and detecting deoxynucleotide binding reaction and TP.
  • Compound A, Compound B, PMEA and PMEG (9-(2-phosphonomemoxyethyl)guanine) were used as test medicaments.
  • Compound A, Compound B and PMEG which are 2-a ⁇ inopurine derivatives inhibited the binding of deoxynucleotide to TP, but PMEA showed no strong inhibition under the same condition.
  • the structure of Compound C is shown below.
  • a serum WHV DNA level was determined by slot blot method. After the WHV DNA level (pg/ml) was normalized by logarithmic transformation, p value was obtained by Dunnett's test between the mean value in each test group and a placebo control group at various points. The results are shown in the following table 3. After the administration of the medicament was terminated after 28 days, in respect of a lOmg/body weight kg/day administration group, significant decrease of the WHV DNA level was observed until the 112 th day, the termination of the observation.
  • N 3 lOmg of Compound C was administered from the 84 th day
  • compounds A, B and C have a profile different from PMEA and its active body, PMEApp, and therefore these compounds are polymerase inhibitors having a novel action mechanism which is different from a competitive action with dNTP. It is considered that the compounds act at the initial stage of the replication of a hepadnaviruses, and inhibit the activation of polymerase by formation of a POL- ⁇ RNA complex
  • the existing anti-viral agent which is competitive with dNTP has a problem regarding rebound of virus level after drug withdrawal, while the medicament of the present invention, which appears to have a polymerase inactivation action, is expected to have a sustained pharmaceutical effect even after drug withdrawal.
  • the anti- viral agent of the present invention has an excellent anti- viral activity, a high oral absorbency and high safety to organisms. Moreover, the anti-viral agent of the present invention which has a polymerase inactivation action, has a sustained pharmaceutical effect even after drug withdrawal, that is, after the termination of administration of the medicament.

Abstract

The object of the present invention is to detect and identify a medicament which inhibits activation of viral polymerase via RNA binding, and also to provide an anti-viral agent using a medicament which inhibits activation of viral polymerase via RNA binding. The present invention provides an anti-viral agent comprising, as an active ingredient, a medicament which inhibits activation of viral polymerase via RNA binding.

Description

DESCRIPTION
ANTI-VIRAL AGENTS AND IN-VITRO METHOD FOR THE IDENTIFICATION OF CANDIDATES ABLE TO INHIBIT BINDING OF POLYMERASE TO EPSILON
Technical Field
The present invention relates to an anti-viral agent showing a novel pharmacological action. More specifically, the present invention relates to an anti-viral agent which exerts an inhibitory mechanism of action against activation of viral polymerase via RNA binding. Moreover, the present invention also relates to a method for screening an anti- viral agent by evaluating inhibition of activation of viral polymerase via RNA binding.
Background Art
Hepatitis B virus (HBV) is a causative agent of an acute or chronic hepatitis B. It is estimated that there are more than 3G0 million HBV carriers throughout the world, and therefore a disease from HBV infection, hepatitis B, is considered to be a serious disease, and has been listed as one of the 10 leading causes of death in the world (World Heath Organization warns of growing "crisis of suffering" http://www.who.int/whr/1997/presse.htm). Since 1999, the only approved therapy to treat HBV infection had been an administration of interferon, but a nucleoside analogue anti-viral agent, lamivudine, has recently been approved to treat HBV infection, and many anti- viral agents are now being clinically developed. Since HBV can infect and replicate only in humans and chimpanzees, a woodchuck hepatitis virus (WHV) and a duck hepatitis B virus (DHBV), which are belonging to Hepadnaviridae like HBV, are recognized as important models of hepadnavirus infection and are used in studies regarding the replication of hepadnaviruses, including searches for the antiviral agents. The hepadnavirus uses a pregenome RNA (pgRNA), which encodes its own core protein and polymerase (POL), as an intermediate for replication of its own viral DNA by RNA-dependent DNA polymerase activity of the POL (Cell, Summers and Mason, Vol. 29, 403-415 (1982)). The POL recognizes and binds to a ε motif, a secondary structure of RNA which locates near the 5 '-terminus on a pgRNA, and then viral core particles are formed by encapsidation with core proteins (The EMBO J., Bartenschlager and Schaller, Vol.ll, No.9, 3413-3420 (1992)). Moreover, it is shown that POL binding to ε motif act as a protein primer, a starter for viral gene replication, and that the POL covalently bonds to the negative strand of the viral DNA (Cell, Wang and Seeger, Vol.71, 663-670 (1992)). In this experiment system, DHBV POL is expressed by an in vitro translation system using a rabbit reticulocyte lysate, and then deoxynucleoside triphosphates (dNTPs) are added to a POL- ε RNA complex in the solution to perform priming reaction, followed by detection of POL covalently bonded to labeled dNTP. Applying this experiment system, anti- viral activity of triphosphorylated nucleoside analogues to compete with dNTP was investigated by using the existing anti-viral agents, and competitive inhibition against each nucleotide had been shown (Journal of Virology, Staschke and Colacino, Vol.68, No.12, 8265-8269 (1994); Antimicrobial Agents and Chemotherapy, Seifer et al., Vol.42, No.12, 3200-3208). Furthermore, a recent study suggests that POL is activated by binding to the ε motif on its pgRNA (Journal of Virology, Tavis et al., Vol.72, No.5, 5789-5796 (1998); and Journal of Virology, Xingtai Wang and Jianming Hu, Vol.76, No.12, 5857-5865 (2002)).
However, any compound that inhibits the activation of POL caused by binding to the ε motif of pgRNA has not been reported until now.
Disclosure of the Invention
An object of the present invention is to search for and identify a medicament which inhibits activation of viral polymerase via RNA binding. Another object of the present invention is to provide an anti-viral agent using a medicament which inhibits activation of viral polymerase via RNA binding. A further object of the present invention is to provide a method for screening a medicament which inhibits activation of viral polymerase via RNA binding.
In the conventional experiment system, a test medicament is added after formation of a POL- ε RNA complex to analyze competitive action with dNTP. Through intensive studies directed toward the above object, the present inventors have improved the conventional experiment system by providing separately each of POL, ε RNA and adding a test medicament before formation of a POL- ε RNA complex, and thereby succeeded to find an inhibitory activity of a compound which did not show the inhibitory activity in the conventional experiment system, The present inventors also succeeded in identifying a novel inhibitory mechanism of viral polymerase, thereby completing the present invention.
According to the present invention, there is provided an anti-viral agent comprising, as an active ingredient, a medicament which inhibits activation of viral polymerase via RNA binding.
Preferably, activation of viral polymerase via RNA binding is activation of viral polymerase via binding of virus RNA and viral polymerase.
Preferably, RNA is ε RNA
Preferably, a pharmacological efficacy is sustained after withdrawing the agent.
Preferably, the virus belongs to Hepadnaviridae, and particularly preferably the virus is a hepatitis B virus.
According to further another preferred embodiment, there is provided the anti-viral agent wherein the medicament is a phosphonate nucleotide compound represented by the following formula (I) or a salt thereof, or a hydrate or solvate thereof:
Figure imgf000005_0001
wherein,
R is a hydroxyl group or a Cι-C6 alkoxy group; each of R and R is independently a hydrogen atom, a -C22 alkyl group, an acyloxymethyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms; R4 is a hydrogen atom, a C1-C4 alkyl group, a Cι-C4 hydroxyalkyl group, or a Cχ-C4 alkyl group substituted by one or more halogen atoms; and X is CH or a nitrogen atom.
Preferably, R1 is a hydroxyl group or a methoxy group.
Preferably, each of R2 and R3 is independently a hydrogen atom, a C1-C22 alkyl group, or an ethyl group substituted by one or more halogen atoms.
Preferably, each of R2 and R3 is independently a hydrogen atom or a 2,2,2-trifluoroethyl group.
Preferably, R4 is a hydrogen atom or a methyl group.
Preferably, X is CH.
Particularly preferably, R1 is a hydroxyl group or a methoxy group, each of R2 and R is independently a hydrogen atom or a 2,2,2-trifluoroethyl group, R is a hydrogen atom, and X is CH.
Particularly preferably, the medicament is
2-am o-6-(4-memoxyphenyltMo)-9-[2-(phosρhonome oxy)ethyl]purine bis(2,2,2-trifluoroethyl) ester, 2-amino-6-(4-methoxyphenylthio)-9-[2- (phosphonomethoxy)ethyl]-purine, 2-amino-6-(4-hydroxyphenylthio)-9-[2- (phosphonomethoxy)ethyl]-purine, or
2-am o-6-(4-hydroxyphenylmio)-9-[2-(ρhosphonomemoxy)ethyl]purine (2,2,2- trifluoroethyl) ester.
According to another aspect of the present invention, there is provided a method for screening an anti- viral agent, which comprises a step of evaluating activation of viral polymerase via RNA binding.
Preferably, the step of evaluating activation of viral polymerase via RNA binding is that of evaluating the degree of binding of virus RNA and viral polymerase.
Preferably, the method for screening an anti-viral agent comprises steps of adding a test medicament to viral polymerase, adding virus RNA, and evaluating the degree of binding of virus RNA and viral polymerase.
Preferably, the method for screening an anti-viral agent comprises steps of adding a test medicament to viral polymerase, adding virus RNA, and judging that the test medicament is an anti- viral agent when the test medicament inhibits the binding of virus RNA and viral polymerase.
Preferably, RNA is ε RNA.
Preferably, the virus belongs to Hepadnaviridae.
Preferably, the virus is a hepatitis B virus.
According to further another aspect of the present invention, there is provided an anti- viral agent obtained by the method for screening an anti- viral agent according to the present invention.
According to further another aspect of the present invention, there is provided an anti-viral agent obtained by the steps of conducting the method for screening an anti-viral agent according to the present invention to obtain an anti-viral substance, producing the thus obtained anti-viral substance by chemical synthesis, and mixing the anti- viral substance with a pharmaceutically acceptable carrier.
According to another aspect of the present invention, there is provided a method for inhibiting a virus, which comprises administration of a pharmacologically effective amount of medicament inhibiting a process where viral polymerase is activated via binding of virus RNA and viral polymerase, to mammals including a human.
According to further aspect of the present invention, there is provided the use of a medicament inhibiting a process where viral polymerase is activated via binding of virus RNA and viral polymerase, for the production of an anti- viral agent.
BRIEF DESCRIPTION OF DRAWINGS
Figure 1 shows a schematic diagram of a plasmid construct. In Figure 1, A shows DHBV POL3' ε used in the conventional method, B shows DHBV POL ε (-) used in the improved method for the preparation of POL, C shows DHBV 5' ε" used in the improved method as ε RNA, D shows DHBV HIS-TP used in the improved method for the preparation of Terminal Protein (TP), and E shows DHBV Δ TP-POL ε (-) used in the improved method for the preparation of TP-deleted POL.
Figure 2 shows test results obtained by the conventional method.
Figure 3 shows test results in respect of RNA concentration dependency by an improved method.
Figure 4 shows results of ε RNA competition tests obtained by an improved method.
Figure 5 shows test results in respect of the analysis of POL level dependency by an improved method.
Figure 6 shows results of study of the TP or ε RNA concentration dependency.
Figure 7 shows results of inhibitory activity of medicament against TP as protein primer during the formation of TP- Δ TP POL- ε RNA complex.
Best Mode for Carrying out the Invention
The anti-viral agent of the present invention is characterized in that it comprises, as an active ingredient, a medicament which inhibits a process where viral polymerase is activated via binding of virus RNA and viral polymerase, and preferably that the pharmacological efficacy is sustained after withdrawing the agent.
Specific examples of medicaments include the phosphonate nucleotide compound of the above formula (I) or a salt thereof, or a hydrate or solvate thereof, and the lik .
In the above formula (I), examples of a Cι-C6 alkoxy group represented by R1 include a methoxy group, an ethoxy group, an n-propyloxy group, an isopropyloxy group, an n-butyloxy group, an isobutyloxy group, a sec-butyloxy group, a tert-butyloxy group, a pentyloxy group, a hexyloxy group, and the like.
In the phosphonate nucleotide compound of the above formula (I), examples of a C1-C22 alkyl group represented by R2 and R3 include a methyl group, an ethyl group, an n-propyl group, an isopropyl group, an n-butyl group, an isobutyl group, a sec-butyl group, a tert-butyl group, a pentyl group, a hexyl group, a heptyl group, an octyl group, a nonyl group, a decyl group, an undecyl group, a dodecyl group, a tridecyl group, a tetradecyl group, a pentadecyl group, a hexadecyl group, a heptadecyl group, an octadecyl group, a nonadecyl group, an icosyl group, a henicosyl group, a docosyl group, and the like.
Examples of an acyloxymethyl group represented by R2 and R3 include an acetyloxymethyl group, a propionyloxymethyl group, a butyryloxymethyl group, an isobutyryloxymethyl group, a valeryloxymethyl group, an isovaleryloxymethyl group, a pivaloyloxymethyl group, and the like.
Examples of an acylthioethyl group represented by R2 and R3 include an acetylthioethyl group, a propionylthioethyl group, a butyrylthioethyl group, an isobutyrylthioethyl group, a valerylthioethyl group, an isovalerylthioethyl group, a pivaloylthioethyl group, and the like.
In an ethyl group substituted by one or more halogen atoms represented by R2 and R3, the type of the halogen atom may be any of a fluorine, chlorine, bromine or iodine atom. Examples of an ethyl group substituted by one or more halogen atoms include a 1-fluoroethyl group, a 2-fluoroethyl group, a 1-chloroethyl group, a 2-chloroethyl group, a 2-bromoethyl group, a 2,2-difluoroethyl group, a 2,2-dichloroethyl group, a 2,2-dibromoethyl group, a 2,2,2-trifluoroethyl group, a 2,2,2-trichloroethyl group, a 2,2,2-tribromoethyl group, and the like. It is particularly preferred that the 2-position of an ethyl group is substituted, and the preferred halogen
9 atom is a fluorine atom. At least one of R and R is preferably an ethyl group substituted by one or more halogen atoms, and particularly preferably 2,2,2-trifluoroethyl group.
Examples of a Cι-C alkyl group represented by R include a methyl group, an ethyl group, an n-propyl group, an isopropyl group, an n-butyl group, an isobutyl group, a sec-butyl group, a tert-butyl group, and the like. Examples of a Ci-C4 hydroxyalkyl group represented by R4 include a hydroxymethyl group, a 1-hydroxyethyl group, a 2-hydroxyethyl group, a 1-hydroxypropyl group, a 2-hydroxyproρyl group, a 3-hydroxypropyl group, a 1-hydroxybutyl group, a 2-hydroxybutyl group, a 3-hydroxybutyl group, a 4-hydroxybutyl group, and the like. Examples of a - alkyl group substituted by one or more halogen atoms represented by R4 include a group in which a halogen atom(s) such as a fluorine atom or a chlorine atom is/are bound to a methyl group, an ethyl group, an n-propyl group, an isopropyl group, an n-butyl group, an isobutyl group, a sec-butyl group, a tert-butyl group, and the like. Specific examples of such a group include a fluoromethyl group, a difluoromethyl group, a trifluoromethyl group, a fluoroethyl group, a chloroethyl group, a fluoropropyl group, a chloropropyl group, a fluorobutyl group, a chlorobutyl group, and the like.
The first condition for the preferred compound of the present invention is that each of R2 and R3 is independently a hydrogen atom, a -C2 alkyl group or an ethyl group substituted by one or more halogen atoms. The second condition for the preferred compound of the present invention is that R2 and R3 is independently a hydrogen atom, a -C22 alkyl group or a 2,2,2-trifluoroethyl group, and R4 is a hydrogen atom or a methyl group.
Examples of specific preferred compounds satisfying such conditions include the following compounds:
2-ammo-6-(4-me oxyphenylmio)-9-[2-(phosphonomemoxy)emyl]purine bis(2,2,2- trifluoroethyl) ester;
2-arruΗo-6-(4-memoxyphenylthio)-9-[2-(phosphonomethoxy)ethyl]purine (2,2,2- trifluoroethyl) ester;
2-amino-6-(4-methoxyphenylthio)-9-[2-(phosphonomethoxy)ethyl]purine; 2-ammo--6-(4-hyάroxyphenylthio)-9-[2-(phosphonomethoxy)ethyl]purine bis(2,2,2-trifluoroethyl) ester;
2-am o-6-(3-hyάioxyphenyl io)-9-[2-(phosρhonomemoxy)emyl]purine bis(2,2,2-trifluoroethyl) ester;
2-anι o-6-(2-hydroxyphenylmio)-9-[2-(phosphonome oxy)emyl]-purine bis(2,2,2-trifluoroethyl) ester;
2-ammo-6-(4-hyα^oxyphenyltMo)-9-[2-(phosρhonomethoxy)ρropyl]purine bis(2,2,2-trifluoroethyl) ester;
2-ammo-6-(3-hyάroxyphenylthio)-9-[2-(phosphonomethoxy)propyl]purine bis(2,2,2-trifluoroethyl) ester;
2-arrώ o-6-(2-hydroxyphenyl o)-9-[2-(ρhosphonomemoxy)propyl]ρurine bis(2,2,2-trifluoroethyl) ester;
2-ammo-6-(4-hydroxyphenyl io)-9-[2-(phosphonomemoxy)emyl]purine memyl(2,2,2-trifluoroethyl) ester;
2-ammo-6-(3-hydroxyphenylthio)-9-[2-(phosρhonomethoxy)ethyl]ρurine methyl(2,2,2-trifluoroethyl) ester;
2-an mo-6-(2-hydroxyphenylmio)-9-[2-(ρhosphonomethoxy)emyl]ρurine methyl(2,2,2-trifluoroethyl) ester; 2-amino-6-(4-hydroxyphenylthio)-9- 2-(phosphonomethoxy)propyl]purine memyl(2,2,2-trifiuoiOethyl) ester;
2-amino-6-(3-hydroxyphenylthio)-9- 2-(phosphonomethoxy)propyl]purine methyl(2,2,2-trifluoroethyl) ester;
2-amino-6-(2-hydroxyphenylthio)-9- 2-(phosphonomethoxy)propyl]purine memyl(2,2,2-trifluoroethyl) ester;
2-amino-6-(4-hydroxyphenylthio)-9- 2-(phosphonomethoxy)ethyl]purine
(2,2,2-trifluoroethyl) ester;
2-amino-6-(3-hydroxyphenylthio)-9- 2-(phosphonomethoxy)ethyl]purine
(2,2,2-trifluoroethyl) ester;
2-amino-6-(2-hydroxyphenylthio)-9- 2-(phosphonome oxy)e yl]purine
(2,2,2-trifluoroethyl) ester;
2-amino-6-(4-hydroxyphenylthio)-9- 2-(ρhosphonomethoxy)ρropyl]purine
(2,2,2-trifluoroethyl) ester;
2-amino-6-(3-hydroxyphenylthio)-9- 2-(phosphonomethoxy)propyl]purine
(2,2,2-trifluoroethyl) ester;
2-arnino-6-(2-hydroxyphenylthio)-9- 2-(ρhosphonomethoxy)ρropyl]purine
(2,2,2-trifluoroethyl) ester;
2-arnino-6-(4-hydroxyphenylthio)-9- 2-(phosphonomethoxy)ethyl]purine;
2-amino-6-(3-hydroxyphenylthio)-9- 2-(phosphonomethoxy)ethyl]purine;
2-amino-6-(2-hydroxyphenylthio)-9- 2-(phosphonomethoxy)ethyl]purine;
2-amino-6-(4-hydroxyρhenylthio)-9- 2-(phosphonomethoxy)propyl]purine;
2-amino-6-(3-hydroxyphenylthio)-9- 2-(ρhosphonomethoxy)proρyl]purine; and
2-amino-6-(2-hydroxyphenylthio)-9- [2-(ρhosphonomethoxy)proρyl]purine. The third condition for the preferred compound of the present invention is that each of R2 and R3 is a 2,2,2-trifluoroethyl group and R4 is a hydrogen atom or a methyl group. Examples of preferred compounds satisfying such conditions include the following compounds: 2-arruno-6-(4-memoxyphenylthio)-9-[2-(phosphonome oxy)ethyl]purine bis(2,2,2- trifluoroethyl) ester;
2-ammo-6-(4-hydroxyphenylmio)-9-[2-(phosphonomemoxy)emyl]purine;
2-ammo-6-(4-memoxyphenyl o)-9-[2-(phosphonomemoxy)ethyl]purine;
2-ammo-6-(4-hydroxyphenyl io)-9-[2-(phosphonomethoxy)emyl]purine bis(2,2,2-trifluoroethyl) ester;
2-arrώιo-6-(3-hydYoxyphenylmio)-9-[2-(phosphonomemoxy)emyl]purine bis(2,2,2-trifluoroethyl) ester;
2-ammo-6-(2-hydroxyphenyltMo)-9-[2-(phosρhonome oxy)emyl]purine bis(2,2,2-trifluoroethyl) ester;
2-ammo-6-(4-hydroxyphenylthio)-9-[2-(phosphonomemoxy)propyl]purine bis(2,2,2-trifluoroethyl) ester;
2-arnmo-6-(3-hydroxyphenyl io)-9-[2-(phosphonomethoxy)propyl]purine bis(2,2,2-trifluoroethyl) ester; and
2-ammo-6-(2-hydroxyphenylmio)-9-[2-(phosphonomethoxy)propyl]purine bis(2,2,2-trifluoroethyl) ester.
The fourth condition for the preferred compound of the present invention is that R1 is a hydroxyl group, each of R2 and R3 is a 2,2,2-trifluoroethyl group, and R4 is a hydrogen atom. Examples of preferred compounds satisfying such conditions include the following compounds:
2-ammo-6-(4-hydroxyphenylthio)-9-[2-(phosphonomethoxy)ethyl]purine bis(2,2,2-trifluoroethyl) ester;
2-ammo-6-(3-hyαroxyphenyl io)-9-[2-(phosphonomemoxy)e yl]purine bis(2,2,2-trifluoroethyl) ester; and
2-ammo-6-(2-hydroxyphenylmio)-9-[2-(phosphonomethoxy)ethyl]purine bis(2,2,2-trifluoroethyl) ester.
The phosphonate nucleotide compound of the above formula (I) of the present invention may exist as a salt, and any salt formed by the above compound can be used as an active ingredient of the anti-viral agent of the present invention. Examples of such a salt include a pharmaceutically acceptable salt. Where an acidic group exists, the acidic group is able to form metal salts such as a lithium salt, a sodium salt, a potassium salt, a magnesium salt and a calcium salt, and ammonium salts such as an ammonium salt, a methyl ammonium salt, a dimethyl ammonium salt, a trimethyl ammonium salt and dicyclohexyl ammonium salt. Where an amino group exists, the arnino group is able to form mineral acid salts such as hydrochloride, hydrobromide, sulfate, nitrate, phosphate and metaphosphate, and organic acid salts such as methanesulfonate, benzenesulfonate, para-toluenesulfonate, acetate, propionate, tartrate, fumarate, maleate, malate, oxalate, succinate, citrate, benzoate, mandelate, cinnamate, lactate, besylate, valerate, stearate, oleate, lactobionate, ethylsuccinate, semisuccinate, butyrate, palmitate, carbamate, gluconate, laurate, salicylate, laokurate, tannate and butylsulfonate.
The phosphonate nucleotide compound of the above formula (I) and salt thereof may exist in the form of a hydrate or solvate. Any given hydrate or solvate which is formed by the phosphonate nucleotide compound of the above formula (I) or salt thereof, can be used as an active ingredient of the medicament of the present invention. Examples of a solvent capable of forming the solvate include methanol, ethanol, isopropanol, acetone, ethyl acetate, methylene chloride, diisopropyl ether, and the like.
Specific examples of the compounds of the formula (I) are shown in the following Table 1 (wherein Me- denotes a methyl group, Et- denotes an ethyl group, i-Pr- denotes an isopropyl group, and t-Bu- denotes a tert-butyl group).
Table 1
Table t
No. R1 R2 R3 R4 X
1 2-OH CF3CH2— CF3CH2— H CH
2 3-0 H CF3CH2"- CF3GH2— H CH
3 4-OH GF3GH2- GF3CH2- H CH
4 2-OH CF3GH2- CFsGHg- H N
5 3-OH CF3GH2- GF3GH2_ H N
6 4-OH GF3CH2- CF3CH2.- H N
7 2-OH GF3CH2- e- H CH 3-OH CF3CH2_ Me- H CH
4-OH CF3CH2.- Me- H CH
2-OH CF32_ Me- H N
3-OH CF3CH2- Me- H N
4-OH CF3GH2- Me- H N
2-OH CF3GH2- Et- H CH
3-OH CF3CH2- Et- H CH
4-OH CF3GH2- Et- H CH
2-OH CF3CH2- H H CH
3-OH CF3CH2- H H CH
4-OH CF3CH2- H H CH
2-OH CF3CH2- H H N
3-OH GF3CH2- H H N
4-OH CF3GH2- H H N
2-OH H H H CH
3-OH H H H CH
4-OH H H H CH
2-OH H H H N
3-OH H H H N
4-OH H H H N
2-OH GF3GH - GF3CH2- Me- CH
3-OH CF3GH2- CF3GH2- Me- CH
4-OH CF3CH2- GF3CH2- Me- CH
2-OH GF3CH2- CF3GH2- Me- N
3-OH GF3GH2- CF3CH2- Me- N
4-OH GF3CH - GF3GH2- Me- N
2-OH G 3GH2- Me- Me- CH
3-OH GF3CH2- Me- Me- CH
4-OH CF3CH2- Me- Me- CH
2-OH CF3CH2- Me- Me- N
3-OH CF3CH2- Me- Me- N
4-OH GF3CH2- Me- Me- N
2-OH GF3CH2- Et- Me- CH
3-OH CF3CH2_ Et- Me- CH
4-OH CF3GH2- Et- Me- CH
2-OH CF3CH2- Et- Me- N
3-OH CF3CH2- Et- Me- N
4-OH CF3CH2- Et- Me- N
2-OH CF3CH2_ H Me- GH
3-OH CF3CH2- H Me- GH
4-OH CF3CH2- H Me- CH
2-OH CF3CH2- H Me- N
3-OH CF3CH2- H Me- - N -OH GF3GH2- H Me- N -OH H H Me- CH -OH H H Me- CH -OH H H Me- CH -OH H H Me- N -OH H H Me- N -OH H H Me- N -OH -CH20-CO-t-Bu -CH20-CO-t-Bu H CH -OH -CH20-CO-t-Bu -CH20-CO-t-Bu H CH -OH -CH20-CO- -Bu -CH20-CO-t-Bu H CH -OH -CH20-CO-t-Bu -CH20-CO-t-Bu Me- CH -OH -CH20-CO-t-Bu -CHzO-CO-t-Bu Me- CH -OH -CH20-CO-t-Bu -CH20-CO-t-Bu Me- CH -OH — GH2CH2S- -CO-i- -Pr — CH2CH2S- -CO-i- Pr H CH -OH — GH2CH2S- -CO-i- -Pr — CH CH2S- -CO-i- Pr H CH -OH
Figure imgf000015_0001
— CH2CH2S- -CO-i- Pr H CH -OH — CH2CH2S" -CO-i- -Pr — CH CH2S- -CO-i- Pr Me- CH -OH — CH2CH2S- -CO-i- -Pr — CH CH2S- -CO-i- Pr Me- CH -OH — CH2CH2S" -CO-i- -Pr — CH2CH2S- -CO-i- Pr Me- CH -OCH3 CF3CH2- CF3CH2- H CH -OCH3 GF3CH2- CF3CH2- H CH -OCH3 CF3CH2- CF3CH2- H CH -OCH3 CF3CH2- CF3CH2- H N -OCH3 CF3CH2- CF3CH2- H N -OCH3 CF3CH2- CF3CH2- H N -OCH3 CF3CH2- Me- H CH -OCH3 CF3CH - Me- H CH -OCH3 GF3CH2- Me- H CH -OCH3 CF3CH2- Me- H N -OCH3 CF3CH2- Me- H N -OCH3 CF3CH2- Me- H N -OCH3 CF3CH2- Et- H CH -OCH3 GF3CH2- Et- H CH -OCH3 CF3CH2- Et- H CH -OCH3 CF3CH2- H H CH -OCH3 CF3CH2- H H CH -OCH3 CF3CH2- H H CH -OCH3 CF3CH2- H H N -OCH3 CF3GH2- H H N -OCH3 CF3CH2- H H N -OCH3 H H H CH -OCH3 H H H CH
Figure imgf000015_0002
ω ω ω u u ω u i N r M N N M M M KS — >■ — >■ -' O O O O O O O O O O CO CO CO CO CO CO ffl ϋl ^ U M -' O ffl OO l OJ ϋl ω S -i O O oo -j a 01 * ω M o (o αi 'j θ) θi * ω ι -' θ β os a oi *
Figure imgf000016_0001
1
X o 1 I I o o o
X o X o 1
X o 1 o 1 o 1 X X X X X X o O O O O O O O O O O X X X
-η o TI -π τ oι o O O O O O O O
-π -π τι -π -τι T| T| T| o
T| τι -η τι τι τι τι τι τι τι r r x o 1 o t X X rα X
O O O O O O O O O O O o O O O O O O O O O o o o o o o O o o O X X X X X X X X X X X X X X X X X X X X X X X X
X X X X I GO ω ω CΛ o o O o o o I I I I o o O o o o o o Q θ J. l J. 1 1 1 o 1 I I
J o J o I I
J I 00 CD UO CO CO CD f l" i" -- - - - - - _
TJ TJ x x
Figure imgf000016_0002
X X X S X X D CD CD CD CD CD CD CD CD CD CD CD sCD CDi s X
CD s CD s CD x x x s CD CD CD CD CD CD C I I I I 1 i 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 oooooooooo o o o z z z o o o z z z o o o z z z o o o Z 2 Z O O O xxxxxxxxx z -z X X X X X X X X X X X X X X X
137 3-OCH3 -CH2CH2S-CO-i-Pr -CH2CH2S-CO-i-Pr Me- CH
138 4-OCH, -CH,CH,S-CO-i-Pr -CH,CH,S-CO-i-Pr Me- CH
As a production method of the compound of the formula (I) in the case where in the formula (I), each of R2 and R3 is a C1-C22 alkyl group, or an ethyl group substituted by one or more halogen atoms, the compound can be synthesized, for example, according to the following reaction route (1) or (2). In the following scheme, R1, R4 and X are the same as defined above, R5 represents a -C22 alkyl group, or an ethyl group substimted by one or more halogen atoms, and W represents a leaving group such as a halogen atom, a para-toluenesulfonyloxy group, a methanesulfonyloxy group or a trifluoromethanesulfonyloxy group.
<Reaction Route (1)>
R5O-P-OR5
I c
OR5
(in)
W-CH2
Figure imgf000018_0001
( H ) (IV)
Figure imgf000018_0002
( I ' )
First, the compound of the above formula (II) is reacted with the compound of the above formula (ffl) at a temperature of 10°C to 250°C, preferably 130°C to 200°C, for 0.1 to 100 hours, preferably for 3 to 24 hours. The compound of the above formula (TV) obtained by the above reaction can be separated and purified by ordinary separation and purification means such as distillation-, adsorption- or partition-chromatographies, as necessary. The compound of the above formula (IV) may be separated and purified as stated above, or it may directly be used for the following reaction without purification. The compound of the above formula (IV) is reacted with the compound of the above formula (V) in the presence of a base such as sodium carbonate, potassium carbonate, cesium carbonate, sodium hydrate, potassium hydrate, trie ylamine and diazabicycloundecen in a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone at a temperature of 10°C to 200°C, preferably 50°C to 150°C, for 0.1 to 100 hours, preferably for 1 to 10 hours, to obtain the compound of the above formula (F).
The source of the compounds of the above formulas (II), (HI) and (V) which are raw materials for reaction route (1) is not particularly limited. For example, a compound commercially available as a reagent may be used, or a compound may be synthesized by a known method, as appropriate. By way of example, the compound of the above formula (V) can be synthesized by heating the compound of the formula (VI) and the compound of the formula (VET) which are described later, in a suitable solvent such as acetonitrile or dimethylsulfoxide at a range of 50°C to 100°C.
The compound of the above formula (I') can also be produced by the following method. In the following scheme, R1, R4, R5, X and W are the same as defined above.
<Reaction Route (2)>
Figure imgf000020_0001
(IV)
Figure imgf000020_0002
( D
The compound of the above formula (IV) obtained by reaction route (1) is reacted with the compound of the above formula (VI) in the presence of a base such as sodium carbonate, potassium carbonate, cesium carbonate, sodium hydrate, potassium hydrate, triemylamine and diazabicycloundecen in a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone at a temperature of 10°C to 200°C, preferably 50°C to 150°C for 0.1 to 100 hours, preferably for 0.5 to 10 hours, to obtain the compound of the above formula (VII). Thereafter, the compound of the above formula (NH) is reacted with a mercaptan represented by the above formula (NHJ) or a salt thereof such as a sodium salt, a potassium salt, a lithium salt or a triemylamine salt, in a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimemylformamide or methylpyrrolidone optionally in the presence of a suitable tertiary amine at a temperature of 10°C to 200°C, preferably 70°C to 120°C for 0.1 to 100 hours, preferably for 0.5 to 12 hours, to obtain the compound of the above formula (F). The compound of the formula (F) corresponds to a compound of the formula (I) wherein each of R2 and R3 is a C1-C22 alkyl group, or an ethyl group substituted by one or more halogen atoms. The source of the compound of the above formula (NT) which is a raw material of reaction route (2), is not particularly limited. For example, a compound commercially available as a reagent may be used, or the compound may be synthesized by a known method as appropriate.
By further altering a phosphate ester portion of the compound of the above formula (F), there can be obtained the compound of the formula (T) wherein R5 of the compound of the formula (F) is converted into another substituent. For example, a compound of the formula (I) wherein both R and R are hydrogen atoms can be obtained by hydrolysis of the compound of the above formula (F). Moreover, a compound of the formula (I) wherein R3 is a hydrogen atom, a -C22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms, and R2 is a C1-C22 alkyl group, or an ethyl group substituted by one or more halogen atoms, can be obtained by reaction of the compound of the above formula (F) with the compound of the formula (IX): R6OH wherein R6 is a hydrogen atom, a -C22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms, in no solvent or in a suitable solvent including a chloric solvent such as dichloromethane; pyridine; acetonitrile; tetrahydrofuran; dimethylsulfoxide; dimethylformamide and methylpyrrolidone, optionally in the presence of acid or alkali, at a temperature of 10°C to 100°C, preferably 20°C to 30°C, for 0.1 to 100 hours, preferably 5 to 12 hours.
Figure imgf000022_0001
( I ' )
In the above scheme, R1, R4, R5, R6 and X are the same as defined above.
A compound of the formula (I) wherein each of R2 and R3 is independently a hydrogen atom, a -C22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms, can also be obtained by the following method. In the following scheme, R1, R4 and X are the same as defined above, and each of R7 and R8 is independently a hydrogen atom, a -C22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms, with the exception that both R7 and R8 can not represent hydrogen atoms at the same time.
Figure imgf000023_0001
Figure imgf000023_0002
(xm)
First, the compound of the above formula (I") is reacted with trime ylsilyldiemylaπiine in a suitable solvent such as dichloromethane, dichloroethane and chloroform around room temperature for about 1 hour. More than two moles of trime ylsUyldiemylamine are used per mole of the compound of the above formula (I"). After the reaction solution is concentrated to dryness, the residue is dissolved into a suitable solvent, for example, a chloric solvent such as dichloromethane, and then oxalyl chloride is added in an amount of 2 or more moles per mole of the compound of the above formula (I"), followed by reaction on ice for about 1 hour, and then around room temperature for about 1 hour in the presence of a catalytic amount of dimethylformamide.
The compound of the above formula (X) obtained by removal of the solvent, usually without being purified, is reacted with the compound of the formula (XI) and/or the compound of the formula (XII) in a suitable solvent, for example, a chloric solvent such as dichloromethane, pyridine, acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone, at a temperature of 10°C to 100°C, preferably 20°C to 30°C for 0.1 to 100 hours, preferably 5 to 12 hours. The obtained compound of the formula (XIII) corresponds to a compound of the formula (I) wherein each of R2 and R3 is independently a hydrogen atom, a C1-C22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms with the exception that both R2 and R3 can not represent hydrogen atoms at the same time. As stated above, the compound of the above formula (I") which is a raw material of the above reaction, can be obtained by hydrolysis of the compound of the formula (F), or it can be more efficiently obtained by reaction of a compound of the formula (F) wherein R5 is a -C22 alkyl group with triethyliodosilane, trimethylbromosilane and the like.
A compound of the formula (I) wherein each of R2 and R3 is an acyloxymethyl group, or wherein either one of R2 and R3 is an acyloxymethyl group and the other is hydrogen, can be obtained by reaction of the compound of the above formula (I") with an acyloxymethyl halide represented by the following formula (XrV): R9Y wherein R9 is an acyloxymethyl group and Y is a chlorine, bromine or iodine atom, in the presence of a base such as sodium carbonate, potassium carbonate, cesium carbonate, sodium hydride, potassium hydride, triethylamine, pyridine, diazabicycloundecen and N,N'-dichlorohexyl-4-morpholinecarboxamidine in a suitable solvent such as acetonitrile, tetrahydrofuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone at a temperature of 0°C to 200°C, preferably 10°C to 100°C for 1 to 300 hours, preferably for 10 to 200 hours. In the case of a compound wherein each of R2 and R3 is an acyloxymethyl group, the compound of the formula (XrV) may be reacted with the compound of the formula (I") in an amount of 2 moles per mole of the compound of the formula (I"), while in the case of a compound wherein either one is an acyloxymethyl group, an equivalent mole reaction may be applied.
A compound wherein either one of R2 and R3 is an acyloxymethyl group, and the other is a -C22 alkyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms, can be produced by preparing a compound wherein either one of R2 and R3 is a C1-C22 alkyl group, an acylthioethyl, group or an ethyl group substituted by one or more halogen atoms, and the other is a hydrogen atom, and then reacting the compound of the above formula (XIV) to this compound by the above method.
The salt of the compound of the formula (I) can be synthesized, for example, by the following method. The compound of the formula (F) is reacted with a corresponding acid with stirring at a temperature of -10°C to 100°C, preferably 10°C to 50°C for 0.1 to 20 hours, preferably for 0.3 to 1 hour in a suitable solvent such as ethyl acetate, isopropanol, acetonitrile, tetrahydiOfuran, dimethylsulfoxide, dimethylformamide or methylpyrrolidone.
Among compounds represented by the formula (I), compounds wherein R1 is a hydroxyl group are disclosed in Japanese Patent Application No. 2000-54675 (published as WO01/64693) and PCT/JP01/01412, and compounds wherein R1 is a Cι-C6 alkoxy group are disclosed in Japanese Patent Application Laid-Open (Kokai) No. 9-255695 (Patent No. 3148139). The disclosures of these applications are incorporated herein as a part of the disclosured of the present application.
The above production method is provided as an example of a method for producing the compound of general formula (I), and so the method for producing the compound used in the present invention is not limited thereto. The compound of the above formula (I) produced by the above method or a salt thereof can be separated and purified by ordinary nucleotide separation and purification means, e.g., by selecting and applying means such as recrystallization-, adsorption-, ion exchange- and partition- chromatographies, as appropriate. A target virus to which the anti-viral agent of the present invention is applicable is not particularly hmited, and specific examples of the target virus include an RNA virus such as human immunodeficiency virus, influenza virus and hepatitis C virus; and a DNA virus such as herpes simplex virus type 1 and type 2, cytomegalovirus, varicella-zoster virus and hepatitis B virus, with hepatitis B virus being more preferable.
Where the anti- viral agent of the present invention is used as a medicament, the compound of the formula (I) may be used singly, but it is preferred that, using a pharmacologically acceptable pharmaceutical additive, a pharmaceutical composition comprising the above compound as an active ingredient is produced and administered. The composition of the pharmaceutical composition is determined by the solubility of the compound, chemical properties, administration route, dosage regimen and the like. For example, the compound can be orally administered in an dosage form of a granule, a parvule, a powder, a tablet, a hard syrup, a soft capsule, a troche, a syrup, an emulsion, a soft gelatine capsule, a gel, a paste, a suspension, a liposome and the like, or the compound can be administered intravenously, intramuscularly or subcutaneously in the form of an injection. In addition, the compound may be formulated into powders for injection, and a solution may be prepared before use.
As a pharmacologically acceptable pharmaceutical additive, an organic or inorganic, solid or liquid carrier, which is suitable for oral, enteral, parenteral or local administration, can be used. Examples of a solid carrier used for the production of a solid formulation include lactose, sucrose, starch, talc, cellulose, dextrin, kaoline, calcium carbonate, agar, pectin, stearic acid, magnesium stearate, lecithin, and sodium chloride. Examples of a liquid carrier used for the production of a liquid formulation for oral administration include glycerine, peanut oil, polyvinylpyrrolidone, olive oil, ethanol, benzyl alcohol, propylene glycol, physiological saline, and water. The above pharmaceutical composition can also comprise, in addition to the above carriers, an adjuvant such as a wetting agent, a suspension aid, a sweetener, a flavor, a coloring agent and a preservative. Further, a liquid agent may be contained in a capsule of a substance which can be absorbed, such as gelatin. Examples of a solvent or a suspending agent, which is used for the production of a formulation for parenteral administration such as an injection, include water, propylene glycol, polyethylene glycol, benzyl alcohol, ethyl oleate, and lecithin.
Considering the properties of known compounds, it can easily be assumed that the compound of the formula (T), especially the ester derivative of the above formula (F) has a high oral absorbency, and therefore oral administration is a preferred administration route for the anti- viral agent of the present invention. The preparation of each of the above formulation can be carried out according to standard techniques. Where the anti- viral agent of the present invention is used for oral administration, the clinical dose is generally 0.1 to 500mg of the compound per kg adult per day, and preferably 0.1 to 50mg of the compound per kg adult per day. The dose may be changed as appropriate, depending on age, disease condition, symptom, the presence or absence of concurrent administration and the like. The above dose may be applied once a day or divided over two to several administrations per day at regular intervals, or may also be applied intermittently every several days. Where the compound of the formula (I) is used as an injection, the applied dose is 0.01 to 50mg of the compound per kg adult per day, preferably 0.1 to 5mg per kg.
[EXAMPLES]
The present invention is further described in the following examples. The present invention is not limited to the Examples. The compound numbers in the Examples correspond to those in Table 1.
Synthesis Example 1 : Production of 2-amino-6-(4-hydroxyphenylthio)-9-[2- (phosphonomethoxy)ethyl]purine bis(2,2,2-trifluoroethyl) ester (Compound No. 3)
87g of 2-chloroethylchloromethylether (670mmol) was reacted with 200g of Tris(2,2,2-trifluoroethyl)phosρhite (βlOmmol) at 160°C for 7 hours to obtain 2-[bis(2,2,2-trifluoroethyl)phosphonylmethoxy]ethylchloride quantitatively. 206g of 2-(phosphonomethoxy)ethylchloride bis(2,2,2-trifluoroethyl) ester was dissolved in 2,000ml of methylethylketone, 270g of sodium iodide was added thereto, and the mixture was refluxed for 8 hours. After reaction, the mixture was cooled to room temperature followed by concentration to dryness. The residue was dissolved in chloroform/hexane and then was adsorbed to a silica gel column, followed by elution with chloroform/hexane to obtain 2-(phosphonomethoxy)ethyliodo bis (2,2,2-trifluoroethyl) ester quantitatively.
15.0g (88mmol) of 2-amino-6-chloropurine was suspended in 360ml of dimethylformamide, and the suspension was reacted with 13.9ml (93mmol) of l,8-diazabicyclo[5.4.0]undec-7-ene at 80°C for 1 hour. 23.8ml of
2-(phosphonomethoxy)ethyliodo bis(2,2,2-trifluoroethyl) ester was added to the above reaction solution, and the mixture was reacted at 100°C for 5 hours. After reaction, the mixture was cooled to room temperature, followed by concentration to dryness. The residue was dissolved in chloroform, and was then adsorbed to a silica gel column followed by elution with 5%-methanol-chloroform to obtain 23.3g (yield 56%) of 2-anι o-6-chloro-9-[2-(phosphonomemoxy)emyl]purme bis(2,2,2-trifluoroethyl) ester.
To 10ml of dimethylformamide solution containing 2g of 2-amino-6-chloro-9-[2-(phosphonomethoxy)ethyl]purine bis(2,2,2-trifluoroethyl) ester, 0.8ml of pyridine and 0.64g of 4-hydroxythiophenol were added, and the mixture was stirred at 100°C for 2 hours. The reaction mixture was cooled to room temperature followed by concentration to dryness.
The residue was dissolved in chloroform and was then adsorbed to a silica gel column followed by elution with 5% to 20% methanol-chloroform to obtain 1.3g (yield 55%) of 2-ammo-6-(4-hyό roxyphenylmio)-9-[2-(phosρhonomemoxy)emyl]ρurine bis(2,2,2-trifluoroethyl) ester.
1H-NMR (DMSO-d6, δ ):3.85-3.88 (m, 2H), 4.14 (d, J=8.1Hz, 2H), 4.19-4.22 (m, 2H), 4.62-4.71 ( , 4H), 6.27 (s, 2H), 6.84 (d, J=8.7Hz, 2H) 7.7 (d, J=8.7Hz, 2H), 7.89 (s, 1H), 9.85 (s, 1H) Synthesis Example 2: Production of 2-amino-6-(4-hydroxyphenylthio)-9-[2- (phosphonomethoxy)ethyl]purine memyl(2,2,2-trifluoroethyl) ester (Compound No. 9) lOOmg of 2-amino-6-(4-hydroxyphenylthio)-9-[2- (phosphonomethoxy)ethyl]purine bis(2,2,2-trifluoroethyl ester (Compound No. 3) was dissolved in a 0.35N ammonia methanol solution, and the mixture was left at room temperature for 40 minutes, followed by removal of the solvent by distillation to obtain the compound of interest.
1H-NMR (DMSO-d6, δ ):3.66 (d, J=4.5Hz, 3H), 3.83-3.87 (m, 2H), 4.00 (d, J=8.1Hz, 2H), 4.18-4.22 (m, 2H), 4.52-4.60 (m, 2H), 6.23 (s, 2H), 6.83 (d, J=8.4Hz, 2H), 7.37 (d, J=8.4Hz, 2H), 7.89 (s, 1H), 9.81 (s, 1H)
Synthesis Example 3 : Production of 2-amino-6-(4-hydroxyphenylthio)-9- [2- (phosphonomethoxy)ethyl]purine 2,2,2-trifluoroethyl ester (Compound No. 18)
60mg of 2-amino-6-(4-hydroxyphenylthio)-9-[2- (phosphonomemoxy)emyl]purmebis2,2,2-trifluoroethyl ester (Compound No. 3) was dissolved in a IN ammonia solution, and the mixture was left at room temperature for 3 hours, followed by removal of the solvent by distillation to obtain the compound of interest.
1H-NMR (DMSO-d6, δ ):3.51-3.54 (m, 2H), 3.74-3.77 (m, 2H), 4.03-4.12 (m, 2H), 4.14-4.16 (m, 2H), 6.20 (s, 2H), 6.82 (d, J=8.4Hz, 2H), 7.12 (b, 3H), 7.36 (d, J=8.4Hz, 2H), 8.00 (s, 1H), 9.81 (s, 1H)
Synthesis Example 4. Production of 2-amino-6-(4-hydroxyphenylthio)-9-[2- (phosphonomethoxy)ethyl]purine (Compound No. 24)
2-amino-6-chloro-9- [2-(phosphonomethoxy)ethyl]purine bisisopropyl ester was obtained by the same process as in Example 1, with the only exception being that triisopropylphosphate was used for substitution of Tris(2,2,2-trifluoroethyl)phosphate.
4.1ml of bromotrimethylsilane was added to 37ml of acetonitrile solution containing 3.7g of 2-amdno-9-[2-(phosphonomethoxy)ethyl]-6-chloropurine bisisopropyl ester, and the mixture was stirred at 25 °C for 16 hours. Then, the solvent was removed by vacuum removal and the residue was crystallized from 45ml acetone- 15ml water to obtain 2.4g of
2-arnmo-6-chloro-9-[2-(phosphonomethoxy)ethyl]purine. 304mg of
4-hydroxythiophenol and 0.32ml of pyridine were added to 5ml of DMF solution containing 308mg of the obtained compound, and the mixture was heated at 100°C for 4 hours. After removal of the solvent, the compound of interest was isolated by high performance liquid chromatography.
1H-NMR (DMSO-d6, δ ):3.57-3.60 (m, 2H), 3.81-3.84 (m, 2H), 6.83 (d, J=8.7Hz, 2H), 7.38 (d, J=8.7Hz, 2H), 7.96 (s, 1H)
Test Example
(1) Preparation of RNA
The schematic diagram of plasmid constructs used in this test is shown in Figure 1. Each of the plasmid constructs has a T7, T3 or Sp6 promoter region upstream of a region encoding an RNA of interest. After digestion of each plasmid construct with restriction enzymes, using RiboMAX™ Large Scale RNA Production Systems (Promega) according to a manufacturer-recommended method, an RNA of interest was obtained. In a construct used in the conventional method, both a region encoding POL and a ε motif exist in the same RNA. In a construct used in the improved method, an RNA encoding POL and another RNA having a ε motif were synthesized separately. Free nucleotides were removed from the obtained RNA products by MicroSpin S-300HR column (Amersham), and the concentration of RNA was adjusted with nuclease-free water.
(2) Pharmaceutical evaluation test by the conventional method
The method of Staschke and Colacino (1994) was used with some modifications. Using an RNA obtained from the construct as shown in Figure 1 A and Rabbit Reticulocyto Lysate System, nuclease treated (Promega), an in vitro translation reaction was carried out to obtain a POL- ε RNA complex of interest. 50mM Tris-hydrochloride buffer (pH7.5), 15mM NaCl and lOmM MgCl2 at final concentration were added to 2.5 μ 1 of POL- ε RNA complex, and dNTP and a test medicament were further added thereto to prepare the mixture of a final volume of 5 μ 1, followed by incubation at 30°C for 30 minutes. In each test, either [ 32P] labeled dATP or dGTP with a specific activity of 400 to l,000Ci/mmol was prepared and used. After incubation of the reaction mixture, the mixture was subjected to SDS polyacrylamide gel electrophoresis according to standard techniques, and the gel was dried, followed by exposure to an Imaging Plate (Fuji Film). The exposed Imaging Plate was read by BAS-5000 (Fuji Film), the labeled POL was detected, and the radioactivity was determined by deduction of the background value of each lane. The pharmaceutical competitive action of the labeled compound was analyzed using kinetics with a dNTP at final concentration of 2 to 0.1 μ M. The test results obtained by the conventional method are shown in Figure 2. At present, the oral prodrug of phosphonomethoxyethyl adenine (PMEA; general name: adefovir) is undergoing a clinical test for an anti-HBN agent; and the diphosphorylated form of PMEA (PMEApp) competes with dATP and proved to be an active metabolite of PMEA. In this experiment system, it was confirmed that PMEApp, diphosphorylated form of PMEA, competed with dATP. However, compound A (2-amino-6-(4-hydroxyphenylthio) 9-[2-(phosphonomethoxy)ethyl]purine) (described in Japanese Patent Application Laid-Open (Kokai) No. 9-255695 (Japanese Patent No. 3148139)) showed no inhibitory activity in this experiment system.
(3) Establishment of an improved method
To find a compound which shows a pharmaceutical effect with a novel action mechanism such as a POL- ε RNA binding inhibitory agent or an inhibition of the first deoxynucleotide covalently attached to POL, which could not be found by the conventional method, the conventional experiment series was improved. Using an RNA obtained from the construct shown in Figure IB and Rabbit Reticulocyto Lysate System, nuclease treated (Promega), an in vitro translation reaction was carried out to obtain a POL protein alone, and then cycloheximide was added thereto at final concentration of lmM to terminate the translation reaction. Similarly, a sample wherein translation is not terminated was prepared. Thereafter, 1/10 volume of ε RNA obtained from the construct shown in Figure 1C was added to the solution at final concentration of 500 to 5.12nM and the mixture was further incubated at 30°C for 60 minutes. To 2.5 μ 1 of the reaction mixture obtained as above, 50mM Tris-hydrochloride buffer (pH7.5), 15mM NaCl and lOmM MgCl2 at final concentration were added, and [ a 32P]-dGTP (600Ci/mmol) was further added thereto at final concentration of 1.6 μ M to prepare the mixture of a final volume of 5 μ 1, followed by incubation at 30°C for 30 minutes. After incubation of the reaction solution, the solution was subjected to 0.1% SDS 7.5% polyacrylamide gel electrophoresis according to standard techniques, and the gel was dried, followed by exposure on an Imaging Plate (Fuji Film). The exposed Imaging Plate was read by BAS-5000 (Fuji Film), the labeled POL was detected, and the radioactive level was determined by deduction of the background value of each lane. The results are shown in Figure 3. The results of a double reciprocal plot (Lineweaver & Burk plot) of Figure 3B show that there is a clear correlation between POL and ε RNA concentration. It has become possible that a compound having a novel mechanism such as POL- ε RNA binding inhibition is evaluated. Furthermore, since the signal intensity differed according to whether or not cycloheximide was added, it was considered that where cycloheximide was not added, the translation reaction still continued at the point of ε RNA binding reaction. Therefore, it was considered that termination of the translation reaction by addition of cycloheximide is required before addition of a medicament and a ε RNA to prevent a pseudo-positive state caused by a non-specific translation inhibitor.
(4) Pharmaceutical evaluation test by the improved method
A test by the improved method was carried out by preparing POL according to the above-described method, adding cycloheximide thereto at final concentration of lmM, and further adding a test medicament, followed by incubation at 30°C for 15 to 30 minutes. The test medicament used in the present invention were compound A (2-ammo-6-(4-memoxyphenylmio)-9-[2-(phosphonomethoxy)ethyl]purine) (described in Japanese Patent Application Laid-Open (Kokai) No. 9-255695 (Japanese Patent No. 3148139)) and compound B (2-amino-6-(4-hydroxyphenylthio)-9-[2- (phosphonomethoxy)ethyl]purine (compound No. 24)). The structure of each of compounds A and B is shown below.
Figure imgf000033_0001
(Compound A) (Compound B)
Thereafter, a ε RNA was added thereto and the mixture was further incubated at 30°C for 60 minutes. 50mM Tris-hydrochloride buffer (pH7.5), 15mM NaCl and lOmM MgCl2 at final concentration were added to 2.5 μ 1 of the obtained reaction solution, and dNTP was further added thereto to obtain the mixture of a final volume of 5 μ 1, followed by incubation at 30°C for 30 minutes. In each test, either [ 32P] labeled dATP or dGTP with a specific activity of 400 to l,000Ci/mmol was prepared and used. After incubation of the reaction solution, the solution was subjected to 0.1% SDS 7.5% polyacrylamide gel electrophoresis according to standard techniques, and the gel was dried, followed by exposure on an Imaging Plate (Fuji Film). The exposed Imaging Plate was read by BAS-5000 (Fuji Film), the labeled POL was detected, and the radioactive level was determined by deduction of the background value of each lane. Figure 4 shows the results of kinetics analysis of ε RNA and Figure 5 shows the results of each binding reaction to ε RNA, in which POL itself was diluted with rabbit reticulocyto lysate to 1, 1/2, 1/3, 1/4 and 1/5, followed by addition of a medicament. Compound A showed no inhibitory activity in the conventional method (Figure 2), but showed the activity in the improved method. The test results obtained by each of the conventional and improved methods are shown below (Table 2).
Table 2.
Summary of analyses by conventional and improved methods
Figure imgf000034_0001
(5) Study of the formation of TP- ΔTP POL- ε RNA complex by dividing Terminal Protein (TP) and Reverse transcriptase (RT) regions of POL
As shown in Figure 1A, Terminal Protein (TP) region to which deoxynucleotide is bound, Reversetranscriptase (RT) region having a reversetranscriptase activity, and RNase H region which digests template RNA are present on POL of Hepadnaviridae virus. In the POL competitive assay in (4) above, the translation of the respective regions on POL can not independently be controlled, and the region which corresponds to the substrate of the inhibitory reaction cannot be identified. Therefore, TP region and a region other than TP on POL ( Δ TP POL) were translated from the separate RNAs by using the constructs shown in Figure 1 D and E, and the formation of TP- Δ TP POL- ε RNA complex was investigated.
In vitro co-translation reaction was carried out using Rabbit reticulocyto Lysate system, nuclease treated (Promega), while the final concentration of RNA derived from the construct of Figure IE is fixed to be l.O g/ l and the final concentration of RNA derived from the construct of Figure ID is adjusted to be 1.0 to 0.2 μ g/ μ 1. To the obtained solution was added ε RNA obtained from the construct of Figure 1C at a final concentration of 600 to 20 nM in 1/10 volume, and the mixture was incubated at 30°C for 60 minutes. To 3 μ 1 of the obtained reaction mixture of TP- ΔTP POL- ε RNA complex was added 50mM Tris-HCl buffer (ρH7.5), 15mM NaCl and lOmM MgCi2 (each concentration is a final concentration). Further, [ a 32P]-dATP (600 Ci/mmol), and cold dTTP, dCTP and dGTP were added at a final concentration of 1.0 μ M, the final volume was adjusted to be 5 μ 1, and the mixture was incubated at 30 °C for 80 minutes. After incubation, the reaction solution was subjected to 0.1%SDS-12% polyacrylamide gel electrophoresis according to a conventional method, and the gel was dried and exposed to an imaging plate (Fuji Film). The result is shown in Figure 6. The binding reaction of deoxynucleotide to TP dependent on TP concentration or ε RNA concentration was confirmed.
(6) Inhibitory activity of medicament against the formation of TP- Δ TP POL- ε RNA complex
Inhibitory activity of medicament against the formation of TP- Δ TP POL- ε RNA complex was assayed by performing the aforementioned translation reaction in the presence of a test medicament to bind ε RNA at a concentration of lOOnM and detecting deoxynucleotide binding reaction and TP. Compound A, Compound B, PMEA and PMEG (9-(2-phosphonomemoxyethyl)guanine) were used as test medicaments. As shown in Figure 7, Compound A, Compound B and PMEG which are 2-aπιinopurine derivatives inhibited the binding of deoxynucleotide to TP, but PMEA showed no strong inhibition under the same condition.
(7) Evaluation in woodchuck chronic hepatitis models
Each group of 4 woodchucks, which were chronically infected with WHN, were orally administered with 2.5mg/bodyweight kg/day or lOmg/body weight kg/day of Compound C or placebo over two administrations per day for 28 days. The structure of Compound C is shown below.
Figure imgf000036_0001
As a marker for determining a pharmaceutical effect, a serum WHV DNA level was determined by slot blot method. After the WHV DNA level (pg/ml) was normalized by logarithmic transformation, p value was obtained by Dunnett's test between the mean value in each test group and a placebo control group at various points. The results are shown in the following table 3. After the administration of the medicament was terminated after 28 days, in respect of a lOmg/body weight kg/day administration group, significant decrease of the WHV DNA level was observed until the 112th day, the termination of the observation.
Table: P value vs a placebo control group of the mean log titer of se m WHV DNA level in serum at various points (Dunnett's test)
Table 3.
0 1 7 14 21 28 35 42 56 70 84 98 112
Compound C 2.5mg/kg 0.6684 0.9930 0.0046 0.0001 0.0001 0.0003 0.0065 0.0022 0.0324 0.0865 0.7312 0.6562 0.9615 Compound C 10mg/kg 0.9867 0.8793 0.0596 0.0065 0.0003 0.0003 0.0018 0.0003 0.0050 0.1670 0.0982 0.0026 0.0650
Parametric Dunnett two-tailed test
All values were calculated using a SAS package of preclinical test version 4.1.
N=4 all groups from initiation of the test
N=3 lOmg of Compound C was administered from the 84th day
From the above results, it was found that compounds A, B and C have a profile different from PMEA and its active body, PMEApp, and therefore these compounds are polymerase inhibitors having a novel action mechanism which is different from a competitive action with dNTP. It is considered that the compounds act at the initial stage of the replication of a hepadnaviruses, and inhibit the activation of polymerase by formation of a POL- ε RNA complex The existing anti-viral agent which is competitive with dNTP, has a problem regarding rebound of virus level after drug withdrawal, while the medicament of the present invention, which appears to have a polymerase inactivation action, is expected to have a sustained pharmaceutical effect even after drug withdrawal.
Industrial Applicability
The anti- viral agent of the present invention has an excellent anti- viral activity, a high oral absorbency and high safety to organisms. Moreover, the anti-viral agent of the present invention which has a polymerase inactivation action, has a sustained pharmaceutical effect even after drug withdrawal, that is, after the termination of administration of the medicament.
The present application claims a priority based on JP Application No.2001-262437, which is incorporated herein by reference as a part of the disclosure of the present application.

Claims

Claims
1. An anti- viral agent comprising, as an active ingredient, a medicament which inhibits activation of viral polymerase via RNA binding.
2. The anti- viral agent according to claim 1 wherein activation of viral polymerase via RNA binding is activation of viral polymerase via binding of virus RNA and viral polymerase.
3. The anti- viral agent according to claim 1 or 2 wherein RNA is ε RNA.
4. The anti-viral agent according to any one of claims 1 to 3, wherein a pharmacological efficacy is sustained after withdrawing the agent.
5. The anti- viral agent according to any one of claims 1 to 4, wherein the virus belongs to Hepadnaviridae.
6. The anti- viral agent according to any one of claims 1 to 5, wherein the virus is a hepatitis B virus.
7. The anti- viral agent according to any one of claims 1 to 6, wherein the medicament is a phosphonate nucleotide compound represented by the following formula (I) or a salt thereof, or a hydrate or solvate thereof:
Figure imgf000040_0001
wherein,
R1 is a hydroxyl group or a -C6 alkoxy group; each of R2 and R3 is independently a hydrogen atom, a -C22 alkyl group, an acyloxymethyl group, an acylthioethyl group, or an ethyl group substituted by one or more halogen atoms; R4 is a hydrogen atom, a Cι-C4 alkyl group, a C1-C4 hydroxyalkyl group, or a -C alkyl group substituted by one or more halogen atoms; and X is CH or a nitrogen atom.
8. The anti-viral agent according to claim 7, wherein R1 is a hydroxyl group or a methoxy group.
9. The anti- viral agent according to claim 7, wherein each of R and R is independently a hydrogen atom, a C1-C22 alkyl group, or an ethyl group substituted by one or more halogen atoms.
10. The anti- viral agent according to claim 7, wherein each of R2 and R3 is independently a hydrogen atom or a 2,2,2-trifluoroethyl group.
11. The anti- viral agent according to claim 7, wherein R4 is a hydrogen atom or a methyl group.
12. The anti-viral agent according to claim 7, wherein X is CH.
13. The anti- viral agent according to claim 7, wherein R1 is a hydroxyl group or a methoxy group, each of R2 and R3 is independently a hydrogen atom or a 2,2,2-trifluoroethyl group, R4 is a hydrogen atom, and X is CH.
14. The anti-viral agent according to claim 1, wherein the medicament is 2--ιnιmo-6-(4-memoxyphenylmio)-9-[2-(phosphonomemoxy)emyl]purine bis(2,2,2- trifluoroethyl) ester, 2-amino--6-(4-methoxyphenylthio)-9-[2-(phosphonomethoxy) ethyljpurine, 2-anι o-6-(4-hydroxyphenylthio)-9-[2-(phosphonomemoxy)emyl]purine, or 2-amino-6-(4-hydroxyphenylthio)-9- [2-(phosphonomethoxy)ethyl]purine (2,2,2- trifluoroethyl) ester.
15. A method for screening an anti- viral agent, which comprises a step of evaluating activation of viral polymerase via RNA binding.
16. The method for screening an anti- viral agent according to claim 15, wherein the step of evaluating activation of viral polymerase via RNA binding is that of evaluating the degree of binding of virus RNA and viral polymerase.
17. The method for screening an anti- viral agent according to claim 15 or 16, which comprises steps of adding a test medicament to viral polymerase, adding virus RNA, and evaluating the degree of binding of virus RNA and viral polymerase.
18. The method for screening an anti- viral agent according to any one of claims 15 to 17, which comprises steps of adding a test medicament to viral polymerase, adding virus RNA, and judging that the test medicament is an anti-viral agent when the test medicament inhibits the binding of virus RNA and viral polymerase.
19. The method for screening an anti- viral agent according to any one of claims 15 to 18, wherein RNA is ε RNA.
20. The method for screening an anti- viral agent according to any one of claims 15 to 19, wherein the virus belongs to Hepadnaviridae.
21. The method for screening an anti- viral agent according to any one of claims 15 to 20, wherein the virus is a hepatitis B virus.
22. An anti- viral agent obtained by the method for screening an anti-viral agent according to any one of claims 15 to 21.
23. An anti- viral agent obtained by the steps of conducting the method for screening an anti- viral agent according to any one of claims 15 to 21 to obtain an anti-viral substance, producing the thus obtained anti-viral substance by chemical synthesis, and mixing the anti-viral substance with a pharmaceutically acceptable carrier.
PCT/JP2002/008799 2001-08-30 2002-08-30 Anti-viral agents and in-vitro method for the identification of candidates able to inhibit binding of polymerase to epsilon WO2003028737A1 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
JP2003532069A JP2005508924A (en) 2001-08-30 2002-08-30 Antiviral agent

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
JP2001262437 2001-08-30
JP2001-262437 2001-08-30

Publications (1)

Publication Number Publication Date
WO2003028737A1 true WO2003028737A1 (en) 2003-04-10

Family

ID=19089337

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/JP2002/008799 WO2003028737A1 (en) 2001-08-30 2002-08-30 Anti-viral agents and in-vitro method for the identification of candidates able to inhibit binding of polymerase to epsilon

Country Status (2)

Country Link
JP (1) JP2005508924A (en)
WO (1) WO2003028737A1 (en)

Cited By (21)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2004046157A1 (en) * 2002-11-15 2004-06-03 Mitsubishi Pharma Corporation Process for producing 2-[bis(2,2,2-trifluoroethyl)phosphonylmethoxy]ethyl halide
WO2005002626A2 (en) * 2003-04-25 2005-01-13 Gilead Sciences, Inc. Therapeutic phosphonate compounds
WO2004096286A3 (en) * 2003-04-25 2005-06-16 Gilead Sciences Inc Antiviral phosphonate analogs
US7273717B2 (en) 2003-10-24 2007-09-25 Gilead Sciences, Inc. Methods and compositions for identifying therapeutic compounds with GS-9005 ester hydrolase B
US7300924B2 (en) 2003-04-25 2007-11-27 Gilead Sciences, Inc. Anti-infective phosphonate analogs
US7407965B2 (en) 2003-04-25 2008-08-05 Gilead Sciences, Inc. Phosphonate analogs for treating metabolic diseases
US7417055B2 (en) 2003-04-25 2008-08-26 Gilead Sciences, Inc. Kinase inhibitory phosphonate analogs
US7427624B2 (en) 2003-10-24 2008-09-23 Gilead Sciences, Inc. Purine nucleoside phosphorylase inhibitory phosphonate compounds
US7427636B2 (en) 2003-04-25 2008-09-23 Gilead Sciences, Inc. Inosine monophosphate dehydrogenase inhibitory phosphonate compounds
US7432272B2 (en) 2003-12-22 2008-10-07 Gilead Sciences, Inc. Antiviral analogs
US7432273B2 (en) 2003-10-24 2008-10-07 Gilead Sciences, Inc. Phosphonate analogs of antimetabolites
US7432261B2 (en) 2003-04-25 2008-10-07 Gilead Sciences, Inc. Anti-inflammatory phosphonate compounds
US7452901B2 (en) 2003-04-25 2008-11-18 Gilead Sciences, Inc. Anti-cancer phosphonate analogs
US7462608B2 (en) 2002-04-26 2008-12-09 Gilead Sciences, Inc. Non nucleoside reverse transcriptase inhibitors
US7470724B2 (en) 2003-04-25 2008-12-30 Gilead Sciences, Inc. Phosphonate compounds having immuno-modulatory activity
KR101154532B1 (en) 2003-11-12 2012-07-04 길리애드 사이언시즈, 인코포레이티드 Antiviral phosphonate analogs
US8951986B2 (en) 2008-07-08 2015-02-10 Gilead Sciences, Inc. Salts of HIV inhibitor compounds
US9187507B2 (en) 2009-12-10 2015-11-17 Institute Of Pharmacology And Toxicology Academy Of Military Medical Sciences P.L.A. China Acyclic nucleoside phosphonate derivatives and medical uses thereof
US9457035B2 (en) 2004-07-27 2016-10-04 Gilead Sciences, Inc. Antiviral compounds
US9593137B2 (en) 2011-12-22 2017-03-14 Geron Corporation Guanine analogs as telomerase substrates and telomere length affectors
US10851125B2 (en) 2017-08-01 2020-12-01 Gilead Sciences, Inc. Crystalline forms of ethyl ((S)-((((2R,5R)-5-(6-amino-9H-purin-9-yl)-4-fluoro-2,5-dihydrofuran-2-yl)oxy)methyl)(phenoxy)phosphoryl(-L-alaninate

Citations (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1994003467A2 (en) * 1992-08-05 1994-02-17 Institute Of Organic Chemistry And Biochemistry Of The Academy Of Sciences Of The Czech Republic Antiretroviral enantiomeric nucleotide analogs
EP0618214A1 (en) * 1993-04-01 1994-10-05 Merrell Dow Pharmaceuticals Inc. Unsaturated phosphonate derivatives of purines and pyrimidines
EP0632048A1 (en) * 1993-06-29 1995-01-04 Mitsubishi Chemical Corporation Phosphonate-nucleotide ester derivatives
WO1996033200A1 (en) * 1995-04-21 1996-10-24 Ústav Organické Chemie A Biochemie Akademie Ved C^¿Eské Republiky Novel compounds and methods for therapy
EP0785208A1 (en) * 1996-01-18 1997-07-23 Mitsubishi Chemical Corporation Phosphonate nucleotide compounds
EP0832896A1 (en) * 1995-06-15 1998-04-01 Mitsubishi Chemical Corporation Phosphonate nucleotide derivatives
EP0919562A1 (en) * 1996-08-13 1999-06-02 Mitsubishi Chemical Corporation Phosphonate nucleotide compounds
WO2001064693A1 (en) * 2000-02-29 2001-09-07 Mitsubishi Pharma Corporation Phosphonate nucleotide compound

Patent Citations (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1994003467A2 (en) * 1992-08-05 1994-02-17 Institute Of Organic Chemistry And Biochemistry Of The Academy Of Sciences Of The Czech Republic Antiretroviral enantiomeric nucleotide analogs
EP0618214A1 (en) * 1993-04-01 1994-10-05 Merrell Dow Pharmaceuticals Inc. Unsaturated phosphonate derivatives of purines and pyrimidines
EP0632048A1 (en) * 1993-06-29 1995-01-04 Mitsubishi Chemical Corporation Phosphonate-nucleotide ester derivatives
US6037335A (en) * 1993-06-29 2000-03-14 Mitsubishi Chemical Corporation Phosphonate-nucleotide ester derivatives
WO1996033200A1 (en) * 1995-04-21 1996-10-24 Ústav Organické Chemie A Biochemie Akademie Ved C^¿Eské Republiky Novel compounds and methods for therapy
EP0832896A1 (en) * 1995-06-15 1998-04-01 Mitsubishi Chemical Corporation Phosphonate nucleotide derivatives
EP0785208A1 (en) * 1996-01-18 1997-07-23 Mitsubishi Chemical Corporation Phosphonate nucleotide compounds
EP0919562A1 (en) * 1996-08-13 1999-06-02 Mitsubishi Chemical Corporation Phosphonate nucleotide compounds
WO2001064693A1 (en) * 2000-02-29 2001-09-07 Mitsubishi Pharma Corporation Phosphonate nucleotide compound

Non-Patent Citations (8)

* Cited by examiner, † Cited by third party
Title
COLACINO J M ET AL: "The identification and development of antiviral agents for the treatment of chronic hepatitis B virus infection.", PROGRESS IN DRUG RESEARCH. FORTSCHRITTE DER ARZNEIMITTELFORSCHUNG. PROGRES DES RECHERCHES PHARMACEUTIQUES. SWITZERLAND 1998, vol. 50, 1998, pages 259 - 322, XP000885900, ISSN: 0071-786X *
DATABASE WPI Section Ch Week 200165, Derwent World Patents Index; Class B02, AN 2001-582144, XP002221470 *
HU JIANMING ET AL: "Hepadnavirus assembly and reverse transcription require a multi-component chaperone complex which is incorporated into nucleocapsids.", EMBO (EUROPEAN MOLECULAR BIOLOGY ORGANIZATION) JOURNAL, vol. 16, no. 1, 1997, pages 59 - 68, XP002221467, ISSN: 0261-4189 *
SEKIYA, KOUICHI ET AL: "2-Amino-6-arylthio-9-[2-(phosphonomethoxy)ethyl]purine Bis(2,2,2-trifluoroethyl) Esters as Novel HBV-Specific Antiviral Reagents", JOURNAL OF MEDICINAL CHEMISTRY (2002), 45(14), 3138-3142, 6 April 2002 (2002-04-06), XP002221469 *
STASCHKE K A ET AL: "Drug discovery and development of antiviral agents for the treatment of chronic hepatitis B virus infection.", PROGRESS IN DRUG RESEARCH. FORTSCHRITTE DER ARZNEIMITTELFORSCHUNG. PROGRES DES RECHERCHES PHARMACEUTIQUES. SWITZERLAND 2001, vol. Spec No, 2001, pages 111 - 183, XP001121546, ISSN: 0071-786X *
STASCHKE K A ET AL: "Priming of duck hepatitis B virus reverse transcription in vitro: premature termination of primer DNA induced by the 5'-triphosphate of fialuridine.", JOURNAL OF VIROLOGY. UNITED STATES DEC 1994, vol. 68, no. 12, December 1994 (1994-12-01), pages 8265 - 8269, XP009001414, ISSN: 0022-538X *
TAVIS JOHN E ET AL: "Evidence for activation of the hepatitis B virus polymerase by binding of its RNA template.", JOURNAL OF VIROLOGY, vol. 70, no. 9, 1996, pages 5741 - 5750, XP002221466, ISSN: 0022-538X *
TAVIS JOHN E ET AL: "The duck hepatitis B virus polymerase is activated by its RNA packaging signal, epsilon.", JOURNAL OF VIROLOGY, vol. 72, no. 7, July 1998 (1998-07-01), pages 5789 - 5796, XP002221468, ISSN: 0022-538X *

Cited By (37)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7462608B2 (en) 2002-04-26 2008-12-09 Gilead Sciences, Inc. Non nucleoside reverse transcriptase inhibitors
US7649015B2 (en) 2002-04-26 2010-01-19 Gilead Sciences, Inc. Cellular accumulation of phosphonate analogs of HIV protease inhibitor compounds
WO2004046157A1 (en) * 2002-11-15 2004-06-03 Mitsubishi Pharma Corporation Process for producing 2-[bis(2,2,2-trifluoroethyl)phosphonylmethoxy]ethyl halide
US7470724B2 (en) 2003-04-25 2008-12-30 Gilead Sciences, Inc. Phosphonate compounds having immuno-modulatory activity
US7429565B2 (en) 2003-04-25 2008-09-30 Gilead Sciences, Inc. Antiviral phosphonate analogs
US7273716B2 (en) 2003-04-25 2007-09-25 Gilead Sciences, Inc. Methods and compositions for identifying therapeutic compounds with GS-7340 ester hydrolase
US9139604B2 (en) 2003-04-25 2015-09-22 Gilead Sciences, Inc. Antiviral phosphonate analogs
US7645747B2 (en) 2003-04-25 2010-01-12 Gilead Sciences, Inc. Therapeutic phosphonate compounds
US7407965B2 (en) 2003-04-25 2008-08-05 Gilead Sciences, Inc. Phosphonate analogs for treating metabolic diseases
US7417055B2 (en) 2003-04-25 2008-08-26 Gilead Sciences, Inc. Kinase inhibitory phosphonate analogs
WO2005002626A2 (en) * 2003-04-25 2005-01-13 Gilead Sciences, Inc. Therapeutic phosphonate compounds
US7427636B2 (en) 2003-04-25 2008-09-23 Gilead Sciences, Inc. Inosine monophosphate dehydrogenase inhibitory phosphonate compounds
EA014685B1 (en) * 2003-04-25 2010-12-30 Джилид Сайэнс, Инк. Phosphonate-containing antiviral compounds (variants) and pharmaceutical composition based thereon
US8871785B2 (en) 2003-04-25 2014-10-28 Gilead Sciences, Inc. Antiviral phosphonate analogs
US8022083B2 (en) 2003-04-25 2011-09-20 Gilead Sciences, Inc. Antiviral phosphonate analogs
US7432261B2 (en) 2003-04-25 2008-10-07 Gilead Sciences, Inc. Anti-inflammatory phosphonate compounds
US7452901B2 (en) 2003-04-25 2008-11-18 Gilead Sciences, Inc. Anti-cancer phosphonate analogs
WO2004096286A3 (en) * 2003-04-25 2005-06-16 Gilead Sciences Inc Antiviral phosphonate analogs
WO2005002626A3 (en) * 2003-04-25 2005-05-26 Gilead Sciences Inc Therapeutic phosphonate compounds
US7300924B2 (en) 2003-04-25 2007-11-27 Gilead Sciences, Inc. Anti-infective phosphonate analogs
US7427624B2 (en) 2003-10-24 2008-09-23 Gilead Sciences, Inc. Purine nucleoside phosphorylase inhibitory phosphonate compounds
US7432273B2 (en) 2003-10-24 2008-10-07 Gilead Sciences, Inc. Phosphonate analogs of antimetabolites
US7273717B2 (en) 2003-10-24 2007-09-25 Gilead Sciences, Inc. Methods and compositions for identifying therapeutic compounds with GS-9005 ester hydrolase B
US7273715B2 (en) 2003-10-24 2007-09-25 Gilead Sciences, Inc. Methods and compositions for identifying therapeutic compounds with GS-9005 ester hydrolase A
KR101154532B1 (en) 2003-11-12 2012-07-04 길리애드 사이언시즈, 인코포레이티드 Antiviral phosphonate analogs
US7432272B2 (en) 2003-12-22 2008-10-07 Gilead Sciences, Inc. Antiviral analogs
US9457035B2 (en) 2004-07-27 2016-10-04 Gilead Sciences, Inc. Antiviral compounds
US9579332B2 (en) 2004-07-27 2017-02-28 Gilead Sciences, Inc. Phosphonate analogs of HIV inhibitor compounds
US8951986B2 (en) 2008-07-08 2015-02-10 Gilead Sciences, Inc. Salts of HIV inhibitor compounds
US9381206B2 (en) 2008-07-08 2016-07-05 Gilead Sciences, Inc. Salts of HIV inhibitor compounds
US9783568B2 (en) 2008-07-08 2017-10-10 Gilead Sciences, Inc. Salts of HIV inhibitor compounds
US9187507B2 (en) 2009-12-10 2015-11-17 Institute Of Pharmacology And Toxicology Academy Of Military Medical Sciences P.L.A. China Acyclic nucleoside phosphonate derivatives and medical uses thereof
US9593137B2 (en) 2011-12-22 2017-03-14 Geron Corporation Guanine analogs as telomerase substrates and telomere length affectors
US10035814B2 (en) 2011-12-22 2018-07-31 Geron Corporation Guanine analogs as telomerase substrates and telomere length affectors
US10562926B2 (en) 2011-12-22 2020-02-18 Geron Corporation Guanine analogs as telomerase substrates and telomere length affectors
US11279720B2 (en) 2011-12-22 2022-03-22 Geron Corporation Guanine analogs as telomerase substrates and telomere length affectors
US10851125B2 (en) 2017-08-01 2020-12-01 Gilead Sciences, Inc. Crystalline forms of ethyl ((S)-((((2R,5R)-5-(6-amino-9H-purin-9-yl)-4-fluoro-2,5-dihydrofuran-2-yl)oxy)methyl)(phenoxy)phosphoryl(-L-alaninate

Also Published As

Publication number Publication date
JP2005508924A (en) 2005-04-07

Similar Documents

Publication Publication Date Title
WO2003028737A1 (en) Anti-viral agents and in-vitro method for the identification of candidates able to inhibit binding of polymerase to epsilon
US6767900B2 (en) Phosphonate nucleotide compound
CN107073005B (en) Methods of treating filoviridae virus infections
JP4083691B2 (en) Antiretroviral enantiomeric nucleotide analogs
AU2010319999B2 (en) 2&#39;-Fluoro-6&#39;-methylene carbocyclic nucleosides and methods of treating viral infections
TWI567074B (en) 2&#39;-fluoro-6&#39;-methylene carbocyclic nucleosides and methods of treating viral infections
KR100366727B1 (en) Phosphonate nucleotide compound
ES2392840T3 (en) Nucleotide analogs for the treatment of viral infections
US5246924A (en) Method for treating hepatitis B virus infections using 1-(2&#39;-deoxy-2&#39;-fluoro-beta-D-arabinofuranosyl)-5-ethyluracil
US20220227776A1 (en) Prodrugs of 1&#39;-substituted carba-nucleoside analogues for antiviral treatment
TW201036989A (en) Uracyl cyclopropyl nucleotides
Kreemerova Amino acid ester prodrugs of nucleoside and nucleotide antivirals
WO2021098379A1 (en) Phenylalanine-amidated nucleotide derivative, preparation method therefor and application thereof
KR19990022752A (en) Phosphonate nucleotide derivatives
AU2004309418B2 (en) 4&#39;-substituted carbovir-and abacavir-derivatives as well as related compounds with HIV and HCV antiviral activity
JP3172801B2 (en) Chiral 2- (phosphonomethoxy) propylguanine as antiviral agent
CA1293972C (en) 1-¬2-(hydroxymethyl)cycloalkylmethyl|-5-substituted uracils
KR970011386B1 (en) Method for treating hepatitis b virus infections using 1-(2&#39;- deoxy-2&#39;-fluoro-beta-d-arabinosyl)-5-etuyl uracil
US6914138B2 (en) Urea nucleosides as therapeutic and diagnostic agents
JP2020164521A (en) Antiviral drug
JP3561272B6 (en) Antiretroviral enantiomeric nucleotide analogues
WO1993017035A1 (en) 2&#39;ISODIDEOXY-β-D-NUCLEOSIDES AS STABLE ANTIVIRAL AGENTS
JP2000503640A (en) Nucleotide analog

Legal Events

Date Code Title Description
AK Designated states

Kind code of ref document: A1

Designated state(s): AE AG AL AM AT AU AZ BA BB BG BY BZ CA CH CN CO CR CU CZ DE DM DZ EC EE ES FI GB GD GE GH HR HU ID IL IN IS JP KE KG KR KZ LK LR LS LT LU LV MA MD MG MK MW MX MZ NO NZ OM PH PL PT RO SD SE SG SI SK SL TJ TM TN TR TT UA UG US UZ VC VN YU ZA ZM

AL Designated countries for regional patents

Kind code of ref document: A1

Designated state(s): GH GM KE LS MW MZ SD SL SZ UG ZM ZW AM AZ BY KG KZ RU TJ TM AT BE BG CH CY CZ DK EE ES FI FR GB GR IE IT LU MC PT SE SK TR BF BJ CF CG CI GA GN GQ GW ML MR NE SN TD TG

DFPE Request for preliminary examination filed prior to expiration of 19th month from priority date (pct application filed before 20040101)
121 Ep: the epo has been informed by wipo that ep was designated in this application
WWE Wipo information: entry into national phase

Ref document number: 2003532069

Country of ref document: JP

122 Ep: pct application non-entry in european phase