WO2004010099A3 - Variable sampling for rendering pixelization of analysis results in optical bio-disc assembly - Google Patents

Variable sampling for rendering pixelization of analysis results in optical bio-disc assembly Download PDF

Info

Publication number
WO2004010099A3
WO2004010099A3 PCT/US2002/015743 US0215743W WO2004010099A3 WO 2004010099 A3 WO2004010099 A3 WO 2004010099A3 US 0215743 W US0215743 W US 0215743W WO 2004010099 A3 WO2004010099 A3 WO 2004010099A3
Authority
WO
WIPO (PCT)
Prior art keywords
pixelization
bio
analysis results
disc assembly
waveform
Prior art date
Application number
PCT/US2002/015743
Other languages
French (fr)
Other versions
WO2004010099A2 (en
Inventor
Andrew Attila Pal
Mark Oscar Worthington
Original Assignee
Burstein Technologies Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Burstein Technologies Inc filed Critical Burstein Technologies Inc
Priority to AU2002368023A priority Critical patent/AU2002368023A1/en
Publication of WO2004010099A2 publication Critical patent/WO2004010099A2/en
Publication of WO2004010099A3 publication Critical patent/WO2004010099A3/en

Links

Classifications

    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N35/00—Automatic analysis not limited to methods or materials provided for in any single one of groups G01N1/00 - G01N33/00; Handling materials therefor
    • G01N35/00029—Automatic analysis not limited to methods or materials provided for in any single one of groups G01N1/00 - G01N33/00; Handling materials therefor provided with flat sample substrates, e.g. slides
    • G01N35/00069—Automatic analysis not limited to methods or materials provided for in any single one of groups G01N1/00 - G01N33/00; Handling materials therefor provided with flat sample substrates, e.g. slides whereby the sample substrate is of the bio-disk type, i.e. having the format of an optical disk
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/01—Arrangements or apparatus for facilitating the optical investigation
    • G01N21/03—Cuvette constructions
    • G01N21/07—Centrifugal type cuvettes
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/17—Systems in which incident light is modified in accordance with the properties of the material investigated
    • G01N21/25—Colour; Spectral properties, i.e. comparison of effect of material on the light at two or more different wavelengths or wavelength bands
    • G01N21/251—Colorimeters; Construction thereof
    • G01N21/253—Colorimeters; Construction thereof for batch operation, i.e. multisample apparatus
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H10/00—ICT specially adapted for the handling or processing of patient-related medical or healthcare data
    • G16H10/40—ICT specially adapted for the handling or processing of patient-related medical or healthcare data for data related to laboratory analysis, e.g. patient specimen analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H40/00—ICT specially adapted for the management or administration of healthcare resources or facilities; ICT specially adapted for the management or operation of medical equipment or devices
    • G16H40/60—ICT specially adapted for the management or administration of healthcare resources or facilities; ICT specially adapted for the management or operation of medical equipment or devices for the operation of medical equipment or devices
    • G16H40/63—ICT specially adapted for the management or administration of healthcare resources or facilities; ICT specially adapted for the management or operation of medical equipment or devices for the operation of medical equipment or devices for local operation

Abstract

Methods and apparatus for effective investigational feature recognition in laboratory samples in optical equipment. Pixelization permits investigational feature recognition at the digitized waveform level instead of at the image level. Pixelization can be used with a bio-disc and its related disc drive assembles. The analog signal from the drive's detector is sampled into a digital waveform. Patterns in the waveform that match the features in the laboratory samples are counted. Synchronizing the sampling rate with the bio-disc drive clock cycle is provided. Other embodiments include calibrating the sampling rate using wobble grooves, pit fields, and an external sampling card with its associated counting software.
PCT/US2002/015743 2001-05-16 2002-05-16 Variable sampling for rendering pixelization of analysis results in optical bio-disc assembly WO2004010099A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU2002368023A AU2002368023A1 (en) 2001-05-16 2002-05-16 Variable sampling for rendering pixelization of analysis results in optical bio-disc assembly

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US29123301P 2001-05-16 2001-05-16
US60/291,233 2001-05-16

Publications (2)

Publication Number Publication Date
WO2004010099A2 WO2004010099A2 (en) 2004-01-29
WO2004010099A3 true WO2004010099A3 (en) 2004-03-25

Family

ID=30770739

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2002/015743 WO2004010099A2 (en) 2001-05-16 2002-05-16 Variable sampling for rendering pixelization of analysis results in optical bio-disc assembly

Country Status (3)

Country Link
US (1) US20020171838A1 (en)
AU (1) AU2002368023A1 (en)
WO (1) WO2004010099A2 (en)

Families Citing this family (16)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6327031B1 (en) * 1998-09-18 2001-12-04 Burstein Technologies, Inc. Apparatus and semi-reflective optical system for carrying out analysis of samples
AU2002228872A1 (en) * 2000-11-09 2002-05-21 Burstein Technologies, Inc. Disc drive system and methods for use with bio-discs
US7026131B2 (en) * 2000-11-17 2006-04-11 Nagaoka & Co., Ltd. Methods and apparatus for blood typing with optical bio-discs
US7087203B2 (en) * 2000-11-17 2006-08-08 Nagaoka & Co., Ltd. Methods and apparatus for blood typing with optical bio-disc
US7091034B2 (en) * 2000-12-15 2006-08-15 Burstein Technologies, Inc. Detection system for disk-based laboratory and improved optical bio-disc including same
AU2002241851A1 (en) * 2001-01-11 2002-07-24 Burstein Technologies, Inc. Optical disc analysis system including related methods for biological and medical imaging
US7221632B2 (en) * 2001-07-12 2007-05-22 Burstein Technologies, Inc. Optical disc system and related detecting methods for analysis of microscopic structures
US20040226348A1 (en) * 2001-07-24 2004-11-18 Phillip Bruce Magnetic assisted detection of magnetic beads using optical disc drives
US20030129665A1 (en) * 2001-08-30 2003-07-10 Selvan Gowri Pyapali Methods for qualitative and quantitative analysis of cells and related optical bio-disc systems
US20080094974A1 (en) * 2001-11-09 2008-04-24 Burstein Technologies, Inc. Optical disc system and related detecting methods for analysis of microscopic structures
EP1448992A4 (en) * 2001-11-20 2005-11-02 Burstein Technologies Inc Optical bio-discs and fluidic circuits for analysis of cells and methods relating thereto
JP2005516336A (en) * 2002-01-28 2005-06-02 バースタイン テクノロジーズ，インコーポレイティド Method and apparatus for logical triggering
US7251210B2 (en) * 2002-01-31 2007-07-31 Burstein Technologies, Inc. Method for triggering through disc grooves and related optical analysis discs and system
US7253886B2 (en) * 2002-05-30 2007-08-07 Matsushita Electric Industrial Co., Ltd. Analysis device and analysis disc used for the same
WO2004106925A2 (en) * 2003-03-03 2004-12-09 Nagaoka & Co.Ltd. Methods and apparatus for use in detection and quantitation of various cell types and use of optical bio-disc for performing same
TWI738139B (en) * 2019-12-04 2021-09-01 財團法人資訊工業策進會 Device, system, and method for data acquisition

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1996009548A1 (en) * 1994-09-21 1996-03-28 The University Court Of The University Of Glasgow Apparatus and method for carrying out analysis of samples

Family Cites Families (64)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US3555284A (en) * 1968-12-18 1971-01-12 Norman G Anderson Multistation, single channel analytical photometer and method of use
US3736432A (en) * 1971-03-22 1973-05-29 Varian Associates Bacterial colony counting method and apparatus
US3966322A (en) * 1973-11-08 1976-06-29 Vickers Limited Device for use in producing a scanning beam of radiation and apparatus for use in investigating specimens
US3939350A (en) * 1974-04-29 1976-02-17 Board Of Trustees Of The Leland Stanford Junior University Fluorescent immunoassay employing total reflection for activation
NL7802860A (en) * 1978-03-16 1979-09-18 Philips Nv REGISTRATION CARRIER BODY AND REGISTRATION CARRIER FOR OPTICAL INFORMATION AND DEVICE FOR REGISTRATION AND READ OUT.
US4957939A (en) * 1981-07-24 1990-09-18 Schering Aktiengesellschaft Sterile pharmaceutical compositions of gadolinium chelates useful enhancing NMR imaging
DE3134611A1 (en) * 1981-09-01 1983-03-10 Boehringer Mannheim Gmbh, 6800 Mannheim METHOD FOR CARRYING OUT ANALYTICAL PROVISIONS AND MEANS SUITABLE FOR THIS
US4608344A (en) * 1981-09-18 1986-08-26 Battelle Memorial Institute Method for the determination of species in solution with an optical wave-guide
US5112134A (en) * 1984-03-01 1992-05-12 Molecular Devices Corporation Single source multi-site photometric measurement system
FR2572533B1 (en) * 1984-10-26 1986-12-26 Guigan Jean METHOD FOR CARRYING OUT THE MEDICAL ANALYSIS OF A LIQUID SAMPLE USING AT LEAST ONE LIQUID REAGENT AND DEVICE FOR CARRYING OUT THE METHOD
EP0506148B1 (en) * 1986-08-29 1999-10-27 Canon Kabushiki Kaisha Input/output apparatus and method of processing image data
US4762683A (en) * 1986-09-16 1988-08-09 E. I. Du Pont De Nemours And Company Analysis device
US5202231A (en) * 1987-04-01 1993-04-13 Drmanac Radoje T Method of sequencing of genomes by hybridization of oligonucleotide probes
US5002867A (en) * 1988-04-25 1991-03-26 Macevicz Stephen C Nucleic acid sequence determination by multiple mixed oligonucleotide probes
US4961916A (en) * 1988-06-02 1990-10-09 Irsst-Institut De Recherche En Sante Et En Securite Du Travail Du Quebec Sampling device
US5281540A (en) * 1988-08-02 1994-01-25 Abbott Laboratories Test array for performing assays
US5087556A (en) * 1989-05-17 1992-02-11 Actimed Laboratories, Inc. Method for quantitative analysis of body fluid constituents
US5143854A (en) * 1989-06-07 1992-09-01 Affymax Technologies N.V. Large scale photolithographic solid phase synthesis of polypeptides and receptor binding screening thereof
KR0182619B1 (en) * 1990-06-15 1999-05-01 로버트 피. 블랙버언 Embedded Assay Assembly and Apparatus
US5286452A (en) * 1991-05-20 1994-02-15 Sienna Biotech, Inc. Simultaneous multiple assays
US5366896A (en) * 1991-07-30 1994-11-22 University Of Virginia Alumni Patents Foundation Robotically operated laboratory system
US6192320B1 (en) * 1991-07-30 2001-02-20 The University Of Virginia Patent Foundation Interactive remote sample analysis system
IL101570A0 (en) * 1992-04-10 1992-12-30 Amir Alon Method and apparatus for reading data
JP3193443B2 (en) * 1992-04-24 2001-07-30 オリンパス光学工業株式会社 Automatic analyzer
US5329461A (en) * 1992-07-23 1994-07-12 Acrogen, Inc. Digital analyte detection system
US5736410A (en) * 1992-09-14 1998-04-07 Sri International Up-converting reporters for biological and other assays using laser excitation techniques
US5478750A (en) * 1993-03-31 1995-12-26 Abaxis, Inc. Methods for photometric analysis
US5361303A (en) * 1993-04-01 1994-11-01 Noise Cancellation Technologies, Inc. Frequency domain adaptive control system
FR2705150B1 (en) * 1993-05-10 1995-07-21 Asulab Sa Multiple zone electrochemical sensor on disk and its application to glucose measurement.
US5413939A (en) * 1993-06-29 1995-05-09 First Medical, Inc. Solid-phase binding assay system for interferometrically measuring analytes bound to an active receptor
JPH0793893A (en) * 1993-09-24 1995-04-07 Toshiba Corp Picture information processing device
IL107181A0 (en) * 1993-10-04 1994-01-25 Nogatech Ltd Optical disk reader
US6309601B1 (en) * 1993-11-01 2001-10-30 Nanogen, Inc. Scanning optical detection system
US5825729A (en) * 1993-12-15 1998-10-20 Canon Kabushiki Kaisha Information recording and/or reproducing method and apparatus in which a servo process of a light beam is interrupted between input/output control of data at predetermined periods
US5578832A (en) * 1994-09-02 1996-11-26 Affymetrix, Inc. Method and apparatus for imaging a sample on a device
US6327031B1 (en) * 1998-09-18 2001-12-04 Burstein Technologies, Inc. Apparatus and semi-reflective optical system for carrying out analysis of samples
US6121048A (en) * 1994-10-18 2000-09-19 Zaffaroni; Alejandro C. Method of conducting a plurality of reactions
US5585069A (en) * 1994-11-10 1996-12-17 David Sarnoff Research Center, Inc. Partitioned microelectronic and fluidic device array for clinical diagnostics and chemical synthesis
US5631166A (en) * 1995-03-21 1997-05-20 Jewell; Charles R. Specimen disk for blood analyses
WO1996034282A1 (en) * 1995-04-27 1996-10-31 Pharmacia Biotech Ab Apparatus for continuously measuring physical and chemical parameters in a fluid flow
US5545531A (en) * 1995-06-07 1996-08-13 Affymax Technologies N.V. Methods for making a device for concurrently processing multiple biological chip assays
US5856174A (en) * 1995-06-29 1999-01-05 Affymetrix, Inc. Integrated nucleic acid diagnostic device
US5871697A (en) * 1995-10-24 1999-02-16 Curagen Corporation Method and apparatus for identifying, classifying, or quantifying DNA sequences in a sample without sequencing
US5700655A (en) * 1995-11-14 1997-12-23 Idexx Laboratories, Inc. Method for quantification of biological material in a sample
JP3631311B2 (en) * 1995-12-15 2005-03-23 富士通株式会社 Optical disk device
JPH09231567A (en) * 1996-02-28 1997-09-05 Sony Corp Optical disk device, optical disk and recording method
JP3653923B2 (en) * 1997-03-19 2005-06-02 ソニー株式会社 Recording / reproducing apparatus and method
JPH1145507A (en) * 1997-07-24 1999-02-16 Toshiba Corp Information reproducing device, recognition device, and information processing system
US5930033A (en) * 1997-08-13 1999-07-27 Marine Biological Labortory Slit scan centrifuge microscope
US6222619B1 (en) * 1997-09-18 2001-04-24 University Of Utah Research Foundation Diagnostic device and method
JP3912444B2 (en) * 1997-09-30 2007-05-09 ミツミ電機株式会社 Optical disk device
US5994150A (en) * 1997-11-19 1999-11-30 Imation Corp. Optical assaying method and system having rotatable sensor disk with multiple sensing regions
ATE477850T1 (en) * 1998-01-12 2010-09-15 Massachusetts Inst Technology DEVICE FOR PERFORMING MICROTESTS
US6395562B1 (en) * 1998-04-22 2002-05-28 The Regents Of The University Of California Diagnostic microarray apparatus
US6304839B1 (en) * 1998-10-14 2001-10-16 Seagate Technology Llc Universal power simulator
US6471916B1 (en) * 1999-11-09 2002-10-29 Packard Instrument Company Apparatus and method for calibration of a microarray scanning system
US6527432B2 (en) * 2000-05-15 2003-03-04 Tecan Trading Ag Bidirectional flow centrifugal microfluidic devices
US6641541B1 (en) * 2000-07-27 2003-11-04 Cardiac Pacemakers, Inc. Method and apparatus for a morphology-preserving smoothing filter
US6560546B1 (en) * 2000-08-07 2003-05-06 Infrasoft Llc Remote analysis system
WO2002079762A2 (en) * 2000-10-27 2002-10-10 Dumas David P Apparatus for fluorescence detection on arrays
WO2002041004A2 (en) * 2000-11-16 2002-05-23 Burstein Technologies, Inc. Optical biodiscs with reflective layers
US7087203B2 (en) * 2000-11-17 2006-08-08 Nagaoka & Co., Ltd. Methods and apparatus for blood typing with optical bio-disc
US7079468B2 (en) * 2000-12-08 2006-07-18 Burstein Technologies, Inc. Optical discs for measuring analytes
US6760298B2 (en) * 2000-12-08 2004-07-06 Nagaoka & Co., Ltd. Multiple data layer optical discs for detecting analytes

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1996009548A1 (en) * 1994-09-21 1996-03-28 The University Court Of The University Of Glasgow Apparatus and method for carrying out analysis of samples
US6339473B1 (en) * 1994-09-21 2002-01-15 The University Court Of The University Of Glasgow Apparatus and method for carrying out analysis of samples

Also Published As

Publication number Publication date
US20020171838A1 (en) 2002-11-21
AU2002368023A8 (en) 2004-02-09
WO2004010099A2 (en) 2004-01-29
AU2002368023A1 (en) 2004-03-04

Similar Documents

Publication Publication Date Title
WO2004010099A3 (en) Variable sampling for rendering pixelization of analysis results in optical bio-disc assembly
ATE419786T1 (en) DEVICE AND METHOD FOR MEASURING HEMODYNAMIC PARAMETERS
AU2003235970A1 (en) Analysis instrument, sample analysis method and analysis device using the instrument, and method of forming opening in the instrument
WO2006066271A3 (en) Method and apparatus for authenticating a magnetic fingerprint signal using a filter capable of isolating a remanent noise related signal componet
WO2003036337A3 (en) Optical biological disk analyser
TW200508587A (en) Sampling device and method for an automatic analysis apparatus
WO1998029050A3 (en) Method and apparatus for electronically imaging a tooth through transilluminaion by light
EP1302803A3 (en) Method and arrangement for high resolution optical detection of samples
WO2005020803A3 (en) Raman imaging and sensing apparatus employing nanoantennas
EP0711048A3 (en) Asynchronous data extraction apparatus
EP1050759A3 (en) Bandpass sampling architecture for wide-frequency band signal analysis
US5172117A (en) Analog to digital conversion using an integrater and a sample and hold circuit
DE60223391D1 (en) Tone height determination method and apparatus for spectral analysis
EP1363423A3 (en) Data signal quality evaluation method and apparatus using high speed sampling
AU627321B2 (en) Method and device for analyzing solid substances on mercury
EP0845865A3 (en) Analogue to digital converter system
EP0793381A3 (en) Sample and hold clock synthesis
AU2002346553A1 (en) Apparatus and methods for tracking and analyzing digital recording device event sequences
EP1005166A3 (en) Method for detecting frequency of digital phase locked loop
EP1480050A3 (en) Hyperfine oversampler method and apparatus
EP1045595A3 (en) Non-linear filter extracting luminance component from a composite video signal
EP1063515A3 (en) Rapid method for determining the erythrocyte sedimentation rate in a sample of anticoagulated whole blood
ATE288022T1 (en) DEVICE AND METHOD FOR CORE COLLECTION
ATE546907T1 (en) SELF-CLOCKING METHOD AND CIRCUIT FOR ADJUSTING THE SAMPLING PHASE IN AN OVERSAMPLED RECEIVER
EP1313061A3 (en) Systems and methods of sampling a photodetector and photocell circuits incorporating the same

Legal Events

Date Code Title Description
AK Designated states

Kind code of ref document: A2

Designated state(s): AE AG AL AM AT AU AZ BA BB BG BR BY BZ CA CH CN CR CU CZ DE DK DM DZ EE ES FI GB GD GE GH GM HR HU ID IL IN IS JP KE KG KP KR KZ LC LK LR LS LT LU LV MA MD MG MK MN MW MX MZ NO NZ PL PT RO RU SD SE SG SI SK SL TJ TM TR TT TZ UA UG UZ VN YU ZA ZW

AL Designated countries for regional patents

Kind code of ref document: A2

Designated state(s): GH GM KE LS MW MZ SD SL SZ TZ UG ZM ZW AM AZ BY KG KZ MD RU TJ TM AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE TR BF BJ CF CG CI CM GA GN GQ GW ML MR NE SN TD TG

121 Ep: the epo has been informed by wipo that ep was designated in this application
REG Reference to national code

Ref country code: DE

Ref legal event code: 8642

122 Ep: pct application non-entry in european phase
NENP Non-entry into the national phase

Ref country code: JP

WWW Wipo information: withdrawn in national office

Country of ref document: JP