WO2008060378A2 - Glycomimetic replacements for hexoses and n-acetyl hexosamines - Google Patents

Glycomimetic replacements for hexoses and n-acetyl hexosamines Download PDF

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Publication number
WO2008060378A2
WO2008060378A2 PCT/US2007/021541 US2007021541W WO2008060378A2 WO 2008060378 A2 WO2008060378 A2 WO 2008060378A2 US 2007021541 W US2007021541 W US 2007021541W WO 2008060378 A2 WO2008060378 A2 WO 2008060378A2
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Prior art keywords
alkanyl
crc
aryl
heteroaryl
alkynyl
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PCT/US2007/021541
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French (fr)
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WO2008060378A3 (en
Inventor
Beat Ernst
Daniel Schwizer
Arun K. Sarkar
John L. Magnani
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Glycomimetics, Inc.
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Application filed by Glycomimetics, Inc. filed Critical Glycomimetics, Inc.
Priority to JP2009532370A priority Critical patent/JP5298020B2/en
Priority to CA2666103A priority patent/CA2666103C/en
Priority to EP07867214.4A priority patent/EP2074132B1/en
Publication of WO2008060378A2 publication Critical patent/WO2008060378A2/en
Publication of WO2008060378A3 publication Critical patent/WO2008060378A3/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H15/00Compounds containing hydrocarbon or substituted hydrocarbon radicals directly attached to hetero atoms of saccharide radicals
    • C07H15/20Carbocyclic rings
    • C07H15/207Cyclohexane rings not substituted by nitrogen atoms, e.g. kasugamycins
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00

Definitions

  • the present invention relates generally to compounds and methods for obtaining oligosaccharide mimics, and more particularly for obtaining oligosaccharide mimics by incorporating or substituting in a cyclohexane derivative.
  • Naturally occurring monosaccharides and oligosaccharides play a role, or are capable of playing a role, in a variety of biological processes.
  • non-naturally occurring monosaccharides and oligosaccharides may serve to replace or even improve upon their naturally occurring counterparts.
  • Monosaccharides and particularly oligosaccharides may be difficult, and thus costly, to produce. Even where the degree of difficulty to produce is not particularly elevated, the production of monosaccharides and oligosaccharides may still nevertheless be costly. This problem is multiplied where a costly monosaccharide or oligosaccharide needs to be mass produced.
  • the invention provides compounds and methods for obtaining oligosaccharide mimics.
  • a method for preparing an oligosaccharide mimic comprising incorporating at least one cyclohexane derivative into an oligosaccharide or glycomimetic compound, wherein the cyclohexane derivative has the formula:
  • R 1 H, C-i-Cs alkanyl, C r C 8 alkenyl, C 1 -C 8 alkynyl, halogenated C 1 -C 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R 1 or R 2 . Also included are products prepared by the method.
  • a method for substituting a monosaccharide mimic for at least one hexose or hexosamine in an oligosaccharide compound or glycomimetic compound or in an oligosaccharide or glycomimetic of an oligosaccharide-containing or glycomimetic-containing compound comprising replacing at least one hexose or hexosamine in an oligosaccharide or glycomimetic compound with a cyclohexane derivative, wherein the cyclohexane derivative has the formula:
  • R 1 H, CrC 8 alkanyl, C r C 8 alkenyl, Ci-C 8 alkynyl, halogenated C r C 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • R 2 H 1 CrC 8 alkanyl, C r C 8 alkenyl, C r C 8 alkynyl, halogenated CrC 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH 1 or NHX
  • the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R 1 or R 2 . Also included are products prepared by the method.
  • the present invention provides an oligosaccharide or glycomimetic compound that contains at least one cyclohexane derivative, wherein the cyclohexane derivative has the formula:
  • R 1 H, CrC 8 alkanyl, C 1 -C 8 alkenyl, d-C 8 alkynyl, halogenated C 1 -C 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • R 2 H, CrC 8 alkanyl, C r C 8 alkenyl, C r C 8 alkynyl, halogenated C r C 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R 1 or R 2 .
  • the present invention provides a compound comprising:
  • R 1 H, CrC 8 alkanyl, d-C 8 alkenyl, d-Cs alkynyl, halogenated C r C 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • R 2 H, C 1 -C 8 alkanyl, C r C 8 alkenyl, CrC 8 alkynyl, halogenated C r C 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • n 0-2 and X is independently selected from C 1 -C 8 alkanyl, C 1 -C 8 alkenyl, C 1 -C 8 alkynyl,
  • R 10 is one of
  • R >5 _ H, D-mannose, L-galactose, D-arabinose, L-fucose, polyols,
  • X CF 3 , cyclopropyl or C r C 8 alkanyl, CrC 8 alkenyl, CrC 8 alkynyl, aryl, heteroaryl, (CH 2 ) m -aryl or (CH 2 ) m -heteroaryl where m is 1-10,
  • Q is H or a physiologically acceptable salt, CrC 8 alkanyl, CrC 8 alkenyl, CrC 8 alkynyl, aryl, heteroaryl,
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • “another of the compound” refers to either a second compound identical to the first compound, or a second compound that is encompassed by the disclosure herein but not identical to the first compound.
  • the present invention provides a compound consisting of:
  • R 1 H, CrC 8 alkanyl, C r C 8 alkenyl, C r C 8 alkynyl, halogenated Ci-C 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • R 2 H, CrC 8 alkanyl, d-C 8 alkenyl, CrC 8 alkynyl, halogenated C r C 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • n 0-2 and X is independently selected from C 1 -C 8 alkanyl, C 1 -C 8 alkenyl, CrC 8 alkynyl,
  • R 10 is one of
  • R >5 _ H, D-mannose, L-galactose, D-arabinose, L-fucose, polyols,
  • X CF 3 , cyclopropyl or C r C ⁇ alkanyl, d-C 8 alkenyl, C r C ⁇ alkynyl, aryl, heteroaryl, (CH 2 )m-aryl
  • Q is H or a physiologically acceptable salt, CrC 8 alkanyl, CrC 8 alkenyl, CrCe alkynyl, aryl, heteroaryl,
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • Me is methyl and Bz is benzoyl.
  • the compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula: where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • Me is methyl and Bz is benzoyl.
  • the compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • Me is methyl and Bz is benzoyl.
  • the compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • Me is methyl and Bz is benzoyl.
  • the compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula: where Me is methyl, Et is ethyl and Bz is benzoyl.
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • Figure 1 is a diagram illustrating the synthesis of GIcNAc mimics from tetrahydrophthalic anhydride.
  • Figure 2 is a diagram illustrating the synthesis of GIcNAc mimics from cyclohexenon.
  • Figure 3 is a diagram illustrating the synthesis of mimics.
  • Figure 4 is a diagram illustrating the synthesis of mimics.
  • Figure 5 is a diagram illustrating the synthesis of mimics.
  • Figure 6 is a diagram illustrating the synthesis of mimics.
  • Figure 7 is a diagram illustrating the synthesis of mimics.
  • Figure 8 is a diagram illustrating the synthesis of mimics.
  • Figure 9 is a diagram illustrating the synthesis of mimics.
  • Figure 10 is a diagram illustrating the synthesis of a pegylated mimic.
  • Figure 11 is a diagram illustrating the synthesis of a pegylated tetramer of a mimic.
  • Figure 12 is a diagram illustrating the synthesis of mimics.
  • Figure 13 is a diagram illustrating the synthesis of mimics.
  • the present invention provides compounds and methods for obtaining monosaccharide and oligosaccharide mimics. Such mimics have a variety of uses in vitro and in vivo, including as antagonists of E-selectin.
  • an oligosaccharide mimic may be prepared by incorporating one or more cyclohexane derivatives into an oligosaccharide or glycomimetic compound.
  • An oligosaccharide refers to two or more monosaccharides covalently joined. Oligosaccharides are polymers containing monosaccharide units, typically with 2 to about 100 monosaccharides and any integer in-between. Each monosaccharide of an oligosaccharide is independently selected; although two or more monosaccharides may be identical.
  • the cyclohexane derivative of the methods of the present invention has the formula:
  • R 1 may be H, CrC 8 alkanyl, CrC 8 alkenyl, CrC 8 alkynyl, halogenated CrC 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • the cyclohexane derivative is attached to the oligosaccharide or glycomimetic compound at least at one of the OH, the R 1 or the R 2 . In embodiments, attachment is at least at one of the OH or the R 2 .
  • Other options for attachment include at both of the OH, e.g., one monosaccharide or monosaccharide mimic attached at one of the OH and another monosaccharide or monosaccharide mimic attached at the other OH.
  • Such a cyclohexane derivative may also be used in a method for substituting a monosaccharide mimic (a cyclohexane derivative) for at least one hexose or hexosamine.
  • the hexose or hexosamine may be in an oligosaccharide or glycomimetic compound or in an oligosaccharide or glycomimetic possessed by an oligosaccharide-containing or glycpmimetic- containing compound. Such a substitution is accomplished by replacing one or more hexose or hexosamine in an oligosaccharide or glycomimetic compound with a cyclohexane derivative. If it is more than one, then each is independently selected.
  • oligosaccharide-containing compounds include glycoproteins, glycopeptides, glycolipids and glyconucleic, acids.
  • a "Ci-Ce alkanyl” refers to an alkane substituent with one to eight carbon atoms and may be straight chain, branched or cyclic (cycloalkanyl). Examples are methyl, ethyl, propyl, isopropyl, butyl and t-butyl.
  • a "halogenated CrCe alkanyl” refers to a "CrC 8 alkanyl” possessing at least one halogen. Where there is more than one halogen present, the halogens present may be the same or different or both (if at least three present).
  • a “CrC 8 alkenyl” refers to an alkene substituent with one to eight carbon atoms, at least one carbon-carbon double bond, and may be straight chain, branched or cyclic (cycloalkenyl). Examples are similar to “CrC 8 alkanyl” examples except possessing at least one carbon-carbon double bond.
  • a “CrC 8 alkynyl” refers to an alkyne substituent with one to eight carbon atoms, at least one carbon-carbon triple bond, and may be straight chain, branched or cyclic (cycloalkynyl). Examples are similar to "CrCs alkanyl” examples except possessing at least one carbon-carbon triple bond.
  • alkoxy refers to an oxygen substituent possessing a "CrC 8 alkanyl,” “CrC 8 alkenyl” or “C r C 8 alkynyl.” This is -O-alkyl; for example methoxy, ethoxy, n-propoxy, i-propoxy, n-butoxy and the like; and alkenyl or alkynyl variations thereof (except for methoxy). It further refers to the group O-alkyl-W-alkyl where W is O or N; for example -O-(CH2) n -W-(CH 2 )m where n and m are independently 1-10.
  • aryl refers to an aromatic substituent with one to fourteen carbon atoms in one or multiple rings which may be separated by a bond or fused.
  • a “heteroaryl” is similar to an “aryl” except the aromatic substituent possesses at least one heteroatom (such as N, O or S) in place of a ring carbon.
  • heteroaryls and heteroaryls include phenyl, naphthyl, pyridinyl, pyrimidinyl, triazolo, furanyl, oxazolyl, thiophenyl, quinolinyl and diphenyl.
  • the term “independently selected” refers to the selection of identical or different substituents.
  • Me and Et represent methyl and ethyl, respectively.
  • Bz represents benzoyl.
  • Ar represents aryl.
  • physiologically acceptable salts include Na, K, Li, Mg and Ca.
  • Monosaccharide substituents recited herein e.g., D-mannose, L-galactose, D-arabinose and L-fucose may be in the furanose, pyranose or open form.
  • a linker arm may be desirable for attachment, for example, to a monosaccharide, a monosaccharide mimic or something else such as an amino acid, nucleic acid or lipid.
  • a linker may include a spacer group, such as — (CH 2 )n — or — O(CH 2 )n — where n is generally about 1-20 (all number ranges disclosed herein include any whole integer range therein).
  • An example of a linker is — NH 2 , e.g., — CH 2 — NH 2 when it includes a short spacer group.
  • Embodiments of linkers include the following:
  • linkers with or without a spacer group e.g., CONH(CH 2 ⁇ NH 2 , COOMe, or polyethylene glycol or derivative
  • linker arm e.g., a linker arm, a cyclohexane derivative may be attached at one or both OH.
  • an oligosaccharide or glycomimetic compound that contains at least one cyclohexane derivative, wherein the cyclohexane derivative has the formula:
  • R 1 is defined as above;
  • R 2 is defined as above; and the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R 1 or R 2 .
  • R 1 of the formula may be H 1 CrC 8 alkanyl, C 1 -Ce alkenyl, CrC 8 alkynyl, halogenated CrC 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • R 3 of the formula may be -OH
  • R 5 of the formula may be H, D-mannose, L-galactose, D-arabinose,
  • R 1 is H, CrC 8 alkanyl, C r C 8 alkenyl, Ci-Ce alkynyl, halogenated C r C 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX
  • R 2 is H, CrC 8 alkanyl, C r C 8 alkenyl, d-C 8 alkynyl, halogenated C r C 8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me 1 OMe, halide, OH, or NHX
  • n 0-2 and X is independently selected from CrC 8 alkanyl, CrC 8 alkenyl, C r C 8 alkynyl,
  • R 10 is one of
  • R is H, D u--mmaan ⁇ n ⁇ oussee,, L ⁇ _--galactose, D-arabinose, L-fucose, polyols,
  • the present invention provides a compound having the formula:
  • the present invention provides a compound having the formula:
  • the present invention provides a compound having the formula:
  • the present invention provides a compound having the formula:
  • the present invention provides a compound having the formula:
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • the present invention provides a compound having the formula:
  • the compound may include a polyethylene glycol attached thereto.
  • multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
  • a sodium salt of the acid is merely representative and any physiologically acceptable acid salt (e.g., Li, K, Mg and Ca) is encompassed.
  • a free acid substituent (or salt thereof) may be modified as an ester (e.g., alkanyl ester) or as an amide or amide-like (e.g., CONHOH).
  • a polyethylene glycol (PEG), including derivatives thereof, may be attached to a compound.
  • PEG polyethylene glycol
  • multimers of the same compound or different compounds of the compounds described herein i.e., two or more compounds joined to one another
  • PEG polyethylene glycol
  • Examples of particular compounds amenable to the attachment of a PEG or to the formation of a multimer including PEG, are disclosed above as embodiments of the present invention.
  • Procedures for preparing a pegylated compound or pegylated multimers will be familiar to those in the art or in possession of the present disclosure. Examples are depicted in Figure 10 (a pegylated compound) and Figure 11 (a pegylated tetramer).
  • Iodolactone V (15.73 g, 62.2 mmol) was dissolved in dry THF (340 ml). Then DBU (14 ml, 93.3 mmol) was added and the mixture was refluxed for 20 h (TLC-control: petroleum ether/Et 2 O, 1 :1 ). The reaction mixture was cooled down to r.t., transferred with Et 2 O (200 ml) into a separation funnel and extracted with aqueous HCI (400 ml, 0.5 M) and brine (400 ml). The aqueous layers were extracted three times with Et 2 O (3x 200 ml). The combined organic layers were dried over Na 2 SO 4 , filtered and concentrated in vacuo (350 mbar).
  • the reaction mixture was diluted with CH 2 CI 2 (50 ml) and washed twice with HCI 3% (2 x 50 ml).
  • the aqueous layers were extracted with CH 2 CI 2 (2 x 25 ml) and the combined organic layers were washed with a mixture of brine (80 ml) and water (100 ml).
  • the layers were separated and the aqueous layer was extracted with CH 2 CI 2 (2 x 50 ml).
  • the combined organic layers were concentrated in vacuo to afford a brown residue still dissolved in a few ml of CH 2 CI 2 , and was then treated with activated charcoal and filtered through celite. The clear green mixture was concentrated to dryness.
  • Tritylether XVII (948 mg, 2.79 mmol) was dissolved under argon atmosphere in CH 2 CI 2 (30 ml) and NaHCO 3 (281 mg, 3.34 mmol) was added. The mixture was cooled to 0 0 C and under stirring m-chloroperbenzoic acid (70 %, 960 mg, 5.56 mmol) was added. After stirring for 1.5 h the reaction temperature was gradually raised to room temperature and the mixture was stirred for another 3.5 h. The reaction was diluted with CH 2 CI 2 (50 ml) and transferred to a separation funnel. The excess of m-chloroperbenzoic acid was destroyed by washing with satd.
  • the reaction was diluted with te/ ⁇ -butyl methyl ether (10 ml) and quenched at 0 0 C with satd. solution of NaHCO 3 (10 ml).
  • the reaction mixture was further diluted and extracted with te/t-butyl methyl ether and satd. solution of NaHCO 3 (each 20 ml).
  • the aqueous layer was extracted twice with terf-butyl methyl ether (2 x 50 ml).
  • the combined organic layers were dried with Na 2 SO 4 and concentrated.
  • the residue was purified by flash chromatography (petroleum ether/EtOAc/Et 3 N, 13:1 :0.07) to yield XIX (206 mg, 64 %) as yellowish resin.
  • CH 2 CI 2 was prepared in a second flask. Both suspensions were stirred at room temperature for 4 h, before adding the DMTST suspension via syringe to the other suspension. The reaction was stopped after 43 h and filtered through celite, washing with CH 2 CI 2 . The filtrate was successively washed with satd. solution of NaHC ⁇ 3 (20 ml) and water (60 ml). The aqueous layers were each time extracted with DCM (3 x 30 ml). The combined organic layers were dried with Na 2 SO 4 and concentrated in vacuo.
  • a vinyl lithium solution was generated in situ by treating a solution of tetravinyl tin (409 ⁇ L, 2.25 mmol) in THF (3 ml_) with nBuLi (2.5 M in hexane, 3.35 ml_, 8.38 mmol) during 30 min at O 0 C.
  • CuCN (373 mg, 4.16 mmol) in THF (8 ml.) was treated with the vinyl lithium solution and BF 3 etherate (209 ⁇ L, 1.66 mmol) in THF (1.5 mL) according to general procedure A.
  • a solution of A-IV (90.0 mg, 0.161 mmol) in THF (4 ml_) was added to Pd/C (45.2 mg, 10% Pd) under argon.
  • the mixture was hydrogenated under atmospheric pressure at r.t. After 30 min the reaction was filtered through celite, concentrated under reduced pressure and purified by column chromatography (toluene/petroleum ether/ethyl acetate, 7:7:1 to 5:5:1 ) to yield A-V (69.8 mg, 77%) as a colorless solid.
  • thioglycoside A-Vl (112 mg, 0.144 mmol) and glycosyl acceptor A-V (61.6 mg, 0.110 mmol) in dry CH 2 CI 2 (4 mL) were added via syringe to activated 3A molecular sieves (1 g).
  • a suspension of DMTST (87.0 mg, 0.337 mmol) and activated 3A molecular sieves (500 mg) in CH 2 CI 2 (2 mL) was prepared in a second flask. Both suspensions were stirred at r.t. for 4 h, then the DMTST suspension was added via syringe to the other suspension with some additional CH2CI2 (1 ml_).
  • A-VII (38.2 mg, 29.9 ⁇ mol) was hydrogenated with Pd(OH) 2 /C (50 mg, 10% Pd) in dioxane/H 2 O (4:1 , 3.75 ml_) according to general procedure D. After 24 h the reaction mixture was filtered through celite and evaporated to dryness. The residue was redissolved in methanol (5 ml_) and sodium methoxide (74.6 ⁇ mol in 73 ⁇ l MeOH) was added. After stirring at r.t. for 16 h the reaction was quenched by addition of acetic acid (8.5 ⁇ l_). The mixture was concentrated in vacuo and purified by preparative, reversed-phase HPLC to afford A-VIII (16.3 mg, 77%) as a colorless solid.
  • a cPrLi solution was generated in situ by treating a solution of bromocyclopropane (370 ⁇ l_, 4.63 mmol) in THF (4 ml_) with fBuLi (1.7 M in pentane, 5.45 mL, 9.27 mmol) during 80 min at -78°C.
  • CuCN 210 mg, 2.34 mmol
  • THF 5 mL
  • BF 3 etherate 115 ⁇ L, 0.914 mmol
  • thioglycoside A-Vl (228 mg, 0.292 mmol) and glycosyl acceptor B-Il (129 mg, 0.225 mmol) in dry CH 2 CI 2 (8 ml_) were added via syringe to activated 3A molecular sieves (2 g).
  • a suspension of DMTST (177 mg, 0.685 mmol) and activated 3A molecular sieves (1 g) in CH 2 CI 2 (4 ml_) was prepared in a second flask. Both suspensions were stirred at r.t. for 4 h, then the DMTST suspension was added via syringe to the other suspension with some additional CH 2 CI 2 (2 ml_).
  • B-III (100 mg, 77.7 ⁇ mol) was hydrogenated with Pd(OH) 2 /C (52 mg, 10% Pd) in dioxane/H 2 O (4:1 , 3.75 ml.) according to general procedure D. After 24 h the mixture was filtered through celite and hydrogenated with fresh Pd(OH) 2 /C (50 mg) for another 48 h. The reaction mixture was filtered through celite and evaporated to dryness. The residue was redissolved in methanol (5 ml.) and sodium methoxide (194 ⁇ mol in 190 ⁇ l MeOH) was added. After stirring at r.t. for 16 h the reaction was quenched by addition of acetic acid (22 ⁇ L). The mixture was concentrated in vacuo and purified by preparative, reversed-phase HPLC to afford B-IV (40.5 mg, 72%) as a colorless solid.
  • thioglycoside A-Vl (218 mg, 0.279 mmol) and glycosyl acceptor C-Il (126 mg, 0.215 mmol) in dry CH 2 CI 2 (8 ml_) were added via syringe to activated 3A molecular sieves (2 g).
  • a suspension of DMTST (166 mg, 0.644 mmol) and activated 3A molecular sieves (1 g) in CH 2 CI 2 (4 ml_) was prepared in a second flask. Both suspensions were stirred at r.t. for 4.5 h, then the DMTST suspension was added via syringe to the other suspension with some additional CH 2 CI 2 (2 ml_). The reaction was stopped after 65.5 h and work-up and purification according to general procedure C afforded C-III (224 mg, 80%) as a colorless foam.
  • A-IV (106 mg, 0.189 mmol) was dissolved in CH 2 CI 2 (5 mL) and Grubbs cat. 2 nd gen. (16.0 mg 18.8 ⁇ mol) and methyl acrylate (171 ⁇ l_, 1.90 mmol) were added. The reaction was heated under reflux for 9 d. After 1 d, 2 d and 7 d additional Grubbs cat. 2 nd gen. (each 16.0 mg, 18.8 ⁇ mol) and methyl acrylate (each 171 ⁇ l_, 1.90 mmol) were added.
  • thioglycoside A-Vl 47.9 mg, 61.3 ⁇ mol
  • glycosyl acceptor D-I 29.1 mg, 47.0 ⁇ mol
  • a suspension of DMTST 37.6 mg, 146 ⁇ mol
  • activated 3A molecular sieves 250 mg
  • CH 2 CI 2 (2 ml_) was prepared in a second flask. Both suspensions were stirred at r.t. for 4 h, then the DMTST suspension was added via syringe to the other suspension with some additional CH 2 CI 2 (1 mL).
  • D-III (46.0 mg, 34.4 ⁇ mol) was hydrogenated with Pd(OH) 2 /C (25 mg, 10% Pd) in dioxane/H 2 O (4:1 , 3.75 ml_) according to general procedure D. After 42 h the mixture was filtered through celite and hydrogenated with fresh Pd(OH) 2 /C (27 mg) for additional 24 h. The reaction mixture was filtered through celite and evaporated to dryness. The residue was redissolved in methanol (3 ml_) and sodium methoxide (51.6 ⁇ mol in 55 ⁇ l MeOH) was added. After stirring at r.t. for 16 h the reaction was quenched by addition of acetic acid (6 ⁇ l_). The mixture was concentrated in vacuo and purified by preparative, reversed-phase HPLC to afford D-III (19.2 mg, 73%) as a colorless solid.
  • rac-l 1 R2R5ff)-5-terf-Butyl-2-hvdiOxycvclohexyl benzoate (rac-E-VII).
  • rac-E-VI (135 mg, 0.287 mmol) was suspended in MeOH (5 ml_).
  • the solvents were evaporated in vacuo and the residue was purified by MPLC on silica (toluene/ethyl acetate, 6:0 to 6:1 ) affording rac-E-VII (63.2 mg, 80%) as a white solid.
  • Second compound (5 mg) was mixed with mPEG- nitrophenylcarbonate (5K) 75 mg , triethylamine 5 ul in DMF (2 ml_). The resulting mixture was stirred at rt for 3 h. The solvent was removed at reduced pressure. The residue was purified on C-18 to afford 40 mg product.
  • Second compound (20 mg) from Example 11 was mixed with 200 mg 4-arm PEG glutamidylsuccinate , triethylamine 5 ul and DMF 2 mL The resulting mixture was stirred at rt for 2 hr. After removing the solvent, the residue was purified on HPLC to afford the product.
  • E-selectin Protocol The inhibition assay to screen glycomimetic antagonists of E-selectin is a competitive binding assay, which allows the determination of IC50 values. Briefly, E-selectin/lg chimera is immobilized by incubation at 37 0 C in 96 well microtiter plates for 2 hours. To reduce nonspecific binding, bovine serum albumin is added to each well and incubated at room temperature for 2 hours. The plate is washed and serial dilutions of the test compounds are added to the wells in the presence of conjugates of biotinylated, sLe a polyacrylamide with streptavidin/horseradishperoxidase and incubated for 2 hours at room temperature.
  • the peroxidase substrate 3,3 ⁇ 5,5 1 tetramethylbenzidin (TMB) is added. After 3 minutes, the enzyme reaction is stopped by the addition of H 3 PO 4 and the absorbance of light at a wavelength of 450 nm is determined. The concentration of test compound required to inhibit binding by 50% is determined and reported as the IC50 value for each glycomimetic E-selectin antagonist. In addition to reporting the absolute IC5 0 value as measured above, relative IC 50 values are determined by a ratio of the IC 50 measured for the test compound to that of a glycomimetic internal control (reference) for each assay. The results from the testing in this assay of several of the compounds disclosed herein are shown below.

Abstract

Compounds and methods are provided for obtaining oligosaccharide mimics. More specifically, compounds and methods are described wherein oligosaccharide mimics are obtained by incorporating or substituting in a cyclohexane derivative.

Description

GLYCOMIMETIC REPLACEMENTS FOR HEXOSES AND N-ACETYL HEXOSAMINES
CROSS-REFERENCE TO RELATED APPLICATION
This application claims the benefit under 35 U. S. C. § 119(e) of U.S. Provisional Patent Application No. 60/851 ,467 filed October 12, 2006 which application is incorporated herein by reference in its entirety.
BACKGROUND
Technical Field
The present invention relates generally to compounds and methods for obtaining oligosaccharide mimics, and more particularly for obtaining oligosaccharide mimics by incorporating or substituting in a cyclohexane derivative.
Description of the Related Art
Naturally occurring monosaccharides and oligosaccharides play a role, or are capable of playing a role, in a variety of biological processes. In certain cases, non-naturally occurring monosaccharides and oligosaccharides may serve to replace or even improve upon their naturally occurring counterparts. Monosaccharides and particularly oligosaccharides may be difficult, and thus costly, to produce. Even where the degree of difficulty to produce is not particularly elevated, the production of monosaccharides and oligosaccharides may still nevertheless be costly. This problem is multiplied where a costly monosaccharide or oligosaccharide needs to be mass produced. While mimics of monosaccharides and oligosaccharides ("glycomimetics") may improve upon their biological properties, the cost of producing the mimics may not be significantly reduced relative to that which they mimic. Accordingly, there is a need in the art for reducing the production cost or complexity of glycomimetics. The present invention fulfills these needs and further provides other related advantages.
BRIEF SUMMARY
Briefly stated, the invention provides compounds and methods for obtaining oligosaccharide mimics. In one aspect of the present invention, a method is provided for preparing an oligosaccharide mimic comprising incorporating at least one cyclohexane derivative into an oligosaccharide or glycomimetic compound, wherein the cyclohexane derivative has the formula:
Figure imgf000004_0001
wherein,
R1 = H, C-i-Cs alkanyl, CrC8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrCe alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated Ci-Ce alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = C1-Cs alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me1 OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated C1-Cs alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; R2 = H, CrC8 alkanyl, CrC8 alkenyl, d-C8 alkynyl, halogenated d-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me1 OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is CrC8 alkanyl, d-C8 alkenyl, CrC8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or - OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(O)NHX or CX2OH, where X = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(O)X, where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of
Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R1 or R2. Also included are products prepared by the method.
In another aspect of the present invention, a method is provided for substituting a monosaccharide mimic for at least one hexose or hexosamine in an oligosaccharide compound or glycomimetic compound or in an oligosaccharide or glycomimetic of an oligosaccharide-containing or glycomimetic-containing compound comprising replacing at least one hexose or hexosamine in an oligosaccharide or glycomimetic compound with a cyclohexane derivative, wherein the cyclohexane derivative has the formula:
Figure imgf000006_0001
wherein,
R1 = H, CrC8 alkanyl, CrC8 alkenyl, Ci-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H1 Ci-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = Ci-C8 alkanyl, d-C8 alkenyl, Ci-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(O)X1 where X = H, CrC8 alkanyl, d-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of
Me, OMe, halide, or OH;
R2 = H1 CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH1 or NHX where X = H1 d-C8 alkanyl, d-C8 alkenyl, d-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is d-C8 alkanyl, CrC8 alkenyl, d-C8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(=O)NHX or CX2OH, where X = d-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated Ci-Ce alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe1 halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated Ci-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of
Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R1 or R2. Also included are products prepared by the method.
In another aspect, the present invention provides an oligosaccharide or glycomimetic compound that contains at least one cyclohexane derivative, wherein the cyclohexane derivative has the formula:
Figure imgf000007_0001
wherein,
R1 = H, CrC8 alkanyl, C1-C8 alkenyl, d-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, C1-C8 alkanyl, d-C8 alkenyl, C1-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, d-C8 alkanyl, Ci-C8 alkenyl, Ci-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH;
R2 = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, Ci-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is C1-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(=O)NHX or CX2OH, where X = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(O)X, where X = H, C1-C8 alkanyl, C1-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R1 or R2. In another aspect, the present invention provides a compound comprising:
Figure imgf000009_0001
R1 = H, CrC8 alkanyl, d-C8 alkenyl, d-Cs alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, d-C8 alkanyl, Ci-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH;
R2 = H, C1-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(=O)NHX or CX2OH, where X = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
Figure imgf000010_0001
-O-C(=O)-X, -NH2, -NH-C(=O)-NHX, or -NH-C(=O)-X where n = 0-2 and X is independently selected from C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl,
Figure imgf000010_0002
Figure imgf000011_0001
and where Q is H or a
Figure imgf000011_0002
physiologically acceptable salt, CrCe alkanyl, CrCs alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where n = 0-10, and any of the above ring compounds may be substituted with one to three independently selected of Cl, F, CF3, C1-C8 alkoxy, NO2, C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, C1-C14 aryl, or OY, C(=O)OY, NY2 or C(=O)NHY where Y is H, C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, or C1-C14 aryl;
Figure imgf000011_0003
6'sulfated GIcNAc, 6'carboxylated GIcNAc, 6'sulfated GaINAc, 6'sulfated galactose, 6'carboxylated galactose,
where Q is H or a physiologically acceptable salt or
Figure imgf000011_0004
CrCe alkanyl, CrC8 alkenyl, C1-C8 alkynyl, aryl, heteroaryl, (CH2)n-aryl or (CH2)n-heteroaryl where n is 1-10, and where R9 is aryl, heteroaryl, cyclohexane, t-butane, adamantane, or triazole, and any of R9 may be substituted with one to three independently selected of Cl, F, CF3, C1-C8 alkoxy, NO2, Ci-C8 alkanyl, Ci-C8 alkenyl, C1-C8 alkynyl or OY, C(=O)OY, NY2 or C(=O)NHY where Y is H, C1-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl or C1-C14 aryl; or
Figure imgf000012_0001
where R10 is one of
Figure imgf000012_0002
where Q is H or a physiologically acceptable salt, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, n = 1 - 4, Z and Y = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl and heteroaryl substituted with Me, OMe, halide, OH; and
R >5 _ = H, D-mannose, L-galactose, D-arabinose, L-fucose, polyols,
Figure imgf000013_0001
where X = CF3, cyclopropyl or CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10,
or where Q is H or a physiologically acceptable
Figure imgf000013_0002
salt, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl, heteroaryl,
(CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where R11
Figure imgf000013_0003
Figure imgf000014_0001
where Q is H or a physiologically acceptable salt, Ci-Cs alkanyl, C1-C8 alkenyl, CrCe alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where n = 0-10, and any one of the above ring compounds may be substituted with one to three independently selected of Cl, F, Ci-C8 alkanyl, Ci-C8 alkenyl, Ci-C8 alkynyl or OY where Y is H, CrC8 alkanyl, d-C8 alkenyl or CrC8 alkynyl.
The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol. As used herein, "another of the compound" refers to either a second compound identical to the first compound, or a second compound that is encompassed by the disclosure herein but not identical to the first compound. In another aspect, the present invention provides a compound consisting of:
Figure imgf000015_0001
R1 = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated Ci-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, d-C8 alkenyl, CrC8 alkynyl, halogenated Ci-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = d-C8 alkanyl, CrC8 alkenyl, d-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, d-C8 alkanyl, d-C8 alkenyl, Ci-C8 alkynyl, halogenated Ci-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH;
R2 = H, CrC8 alkanyl, d-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, d-C8 alkanyl, d-C8 alkenyl, d-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is d-C8 alkanyl, CrC8 alkenyl, d-C8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(O)NHX or CX2OH, where X = d-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, C1-C8 alkanyl, C1-C8 alkenyl, CrC8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
Figure imgf000016_0001
-0-Ci=O)-X, -NH2, -NH-C(=O)-NHX, or -NH-C(=O)-X where n = 0-2 and X is independently selected from C1-C8 alkanyl, C1-C8 alkenyl, CrC8 alkynyl,
Figure imgf000016_0002
Figure imgf000017_0001
and where Q is H or a
Figure imgf000017_0002
physiologically acceptable salt, C1-C8 alkanyl, CrC8 alkenyl, CrCs alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where n = 0-10, and any of the above ring compounds may be substituted with one to three independently selected of Cl, F, CF3, CrC8 alkoxy, NO2, CrC8 alkanyl, d-C8 alkenyl, C1-C8 alkynyl, CrC14 aryl, or OY, C(=O)OY, NY2 or C(=O)NHY where Y is H, CrC8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, or C1-C14 aryl;
Figure imgf000017_0003
6'sulfated GIcNAc, 6'carboxylated GIcNAc, 6'sulfated GaINAc, 6'sulfated galactose, 6'carboxylated galactose,
where Q is H or a physiologically acceptable salt or
Figure imgf000017_0004
C1-C8 alkanyl, Ci-Cs alkenyl, CrCs alkynyl, aryl, heteroaryl, (CH2)n-aryl or (CH2)n-heteroaryl where n is 1-10, and where R9 is aryl, heteroaryl, cyclohexane, t-butane, adamantane, or triazole, and any of R9 may be substituted with one to three independently selected of Cl, F, CF3, C1-C8 alkoxy, NO2, CrC8 alkanyl, CrC8 alkenyl, d-C8 alkynyl or OY, C(=O)OY, NY2 or C(=O)NHY where Y is H, CrC8 alkanyl, CrC8 alkenyl, d-C8 alkynyl or C1-Ci4 aryl; or
Figure imgf000018_0001
where R10 is one of
O O Ov OQ θv OQ υ u u
A0H V
' ^NH2 /P-OE AN-CN AN-OH A,
H
Figure imgf000018_0002
where Q is H or a physiologically acceptable salt, CrCe alkanyl, CrCe alkenyl, CrCe alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, n = 1 - 4, Z and Y = CrCe alkanyl, CrCe alkenyl, CrCe alkynyl, halogenated CrCe alkanyl, aryl and heteroaryl substituted with Me, OMe, halide, OH; and
R >5 _ = H, D-mannose, L-galactose, D-arabinose, L-fucose, polyols,
where X = CF3, cyclopropyl or Cr
Figure imgf000019_0001
alkanyl, d-C8 alkenyl, CrCβ alkynyl, aryl, heteroaryl, (CH2)m-aryl
or (CH2)m-heteroaryl where m is 1-10,
or where Q is H or a physiologically acceptable
Figure imgf000019_0002
salt, CrC8 alkanyl, CrC8 alkenyl, CrCe alkynyl, aryl, heteroaryl,
(CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where R 11
Figure imgf000019_0003
Figure imgf000020_0001
where Q is H or a physiologically acceptable salt, CrCe alkanyl, CrCe alkenyl, Ci-Ce alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where n = 0-10, and any one of the above ring compounds may be substituted with one to three independently selected of Cl, F, CrCe alkanyl, CrC8 alkenyl, CrC8 alkynyl or OY where Y is H, CrC8 alkanyl, C1-C8 alkenyl or CrC8 alkynyl.
The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000021_0001
where Q is H or a physiologically acceptable salt, and Me is methyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000021_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000022_0001
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000022_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol. In an embodiment, the present invention provides a compound having the formula:
Figure imgf000023_0001
where Q is H or a physiologically acceptable salt, and Me is methyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000023_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol. In an embodiment, the present invention provides a compound having the formula:
Figure imgf000024_0001
where Me is methyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000024_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000025_0001
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000025_0002
where Q is H or a physiologically acceptable salt, and Me is methyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000026_0001
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000026_0002
where Q is H or a physiologically acceptable salt, and Me is methyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol. In an embodiment, the present invention provides a compound having the formula:
Figure imgf000027_0001
where Me is methyl, Et is ethyl, and Bz in benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000027_0002
where Me is methyl and Bz in benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol. In an embodiment, the present invention provides a compound having the formula:
Figure imgf000028_0001
where Me is methyl, Et is ethyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000028_0002
where Me is methyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
These and other aspects of the present invention will become apparent upon reference to the following detailed description and attached drawings. All references disclosed herein are hereby incorporated by reference in their entirety as if each was incorporated individually. BRIEF DESCRIPTION OF THE SEVERAL VIEWS OF THE DRAWINGS
Figure 1 is a diagram illustrating the synthesis of GIcNAc mimics from tetrahydrophthalic anhydride.
Figure 2 is a diagram illustrating the synthesis of GIcNAc mimics from cyclohexenon.
Figure 3 is a diagram illustrating the synthesis of mimics.
Figure 4 is a diagram illustrating the synthesis of mimics.
Figure 5 is a diagram illustrating the synthesis of mimics.
Figure 6 is a diagram illustrating the synthesis of mimics. Figure 7 is a diagram illustrating the synthesis of mimics.
Figure 8 is a diagram illustrating the synthesis of mimics.
Figure 9 is a diagram illustrating the synthesis of mimics.
Figure 10 is a diagram illustrating the synthesis of a pegylated mimic. Figure 11 is a diagram illustrating the synthesis of a pegylated tetramer of a mimic.
Figure 12 is a diagram illustrating the synthesis of mimics.
Figure 13 is a diagram illustrating the synthesis of mimics.
DETAILED DESCRIPTION As noted above, the present invention provides compounds and methods for obtaining monosaccharide and oligosaccharide mimics. Such mimics have a variety of uses in vitro and in vivo, including as antagonists of E-selectin.
Within the present invention, an oligosaccharide mimic may be prepared by incorporating one or more cyclohexane derivatives into an oligosaccharide or glycomimetic compound. An oligosaccharide refers to two or more monosaccharides covalently joined. Oligosaccharides are polymers containing monosaccharide units, typically with 2 to about 100 monosaccharides and any integer in-between. Each monosaccharide of an oligosaccharide is independently selected; although two or more monosaccharides may be identical.
The cyclohexane derivative of the methods of the present invention has the formula:
Figure imgf000030_0001
R1 may be H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, d-C8 alkanyl, C1-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX1 NHX, NH(O)X, where X = H, C1-C8 alkanyl, CrC8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH. R2 may be H, CrC8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, CrC8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(=O)NHX or CX2OH, where X = C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, C1-C8 alkanyl, CrC8 alkenyl, Ci-Ce alkynyl, halogenated C1-Ce alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H. The cyclohexane derivative is attached to the oligosaccharide or glycomimetic compound at least at one of the OH, the R1 or the R2. In embodiments, attachment is at least at one of the OH or the R2. Other options for attachment include at both of the OH, e.g., one monosaccharide or monosaccharide mimic attached at one of the OH and another monosaccharide or monosaccharide mimic attached at the other OH. Such a cyclohexane derivative may also be used in a method for substituting a monosaccharide mimic (a cyclohexane derivative) for at least one hexose or hexosamine. The hexose or hexosamine may be in an oligosaccharide or glycomimetic compound or in an oligosaccharide or glycomimetic possessed by an oligosaccharide-containing or glycpmimetic- containing compound. Such a substitution is accomplished by replacing one or more hexose or hexosamine in an oligosaccharide or glycomimetic compound with a cyclohexane derivative. If it is more than one, then each is independently selected. Examples of oligosaccharide-containing compounds include glycoproteins, glycopeptides, glycolipids and glyconucleic, acids. As used herein, a "Ci-Ce alkanyl" refers to an alkane substituent with one to eight carbon atoms and may be straight chain, branched or cyclic (cycloalkanyl). Examples are methyl, ethyl, propyl, isopropyl, butyl and t-butyl. A "halogenated CrCe alkanyl" refers to a "CrC8 alkanyl" possessing at least one halogen. Where there is more than one halogen present, the halogens present may be the same or different or both (if at least three present). A "CrC8 alkenyl" refers to an alkene substituent with one to eight carbon atoms, at least one carbon-carbon double bond, and may be straight chain, branched or cyclic (cycloalkenyl). Examples are similar to "CrC8 alkanyl" examples except possessing at least one carbon-carbon double bond. A "CrC8 alkynyl" refers to an alkyne substituent with one to eight carbon atoms, at least one carbon-carbon triple bond, and may be straight chain, branched or cyclic (cycloalkynyl). Examples are similar to "CrCs alkanyl" examples except possessing at least one carbon-carbon triple bond. An "alkoxy" refers to an oxygen substituent possessing a "CrC8 alkanyl," "CrC8 alkenyl" or "CrC8 alkynyl." This is -O-alkyl; for example methoxy, ethoxy, n-propoxy, i-propoxy, n-butoxy and the like; and alkenyl or alkynyl variations thereof (except for methoxy). It further refers to the group O-alkyl-W-alkyl where W is O or N; for example -O-(CH2)n-W-(CH2)m where n and m are independently 1-10. An "aryl" refers to an aromatic substituent with one to fourteen carbon atoms in one or multiple rings which may be separated by a bond or fused. A "heteroaryl" is similar to an "aryl" except the aromatic substituent possesses at least one heteroatom (such as N, O or S) in place of a ring carbon. Examples of aryls and heteroaryls include phenyl, naphthyl, pyridinyl, pyrimidinyl, triazolo, furanyl, oxazolyl, thiophenyl, quinolinyl and diphenyl. As used herein, the term "independently selected" refers to the selection of identical or different substituents. "Me" and "Et" represent methyl and ethyl, respectively. "Bz" represents benzoyl. "Ar" represents aryl. Examples of physiologically acceptable salts include Na, K, Li, Mg and Ca. Monosaccharide substituents recited herein (e.g., D-mannose, L-galactose, D-arabinose and L-fucose) may be in the furanose, pyranose or open form.
A linker arm may be desirable for attachment, for example, to a monosaccharide, a monosaccharide mimic or something else such as an amino acid, nucleic acid or lipid. A linker may include a spacer group, such as — (CH2)n — or — O(CH2)n — where n is generally about 1-20 (all number ranges disclosed herein include any whole integer range therein). An example of a linker is — NH2, e.g., — CH2 — NH2 when it includes a short spacer group. Embodiments of linkers include the following:
Figure imgf000033_0001
Squaric acid Thiourea
Figure imgf000033_0002
Dithiadiazoleoxide Acylation via Thiofuran
H O H O O H I Il -N-C- (CH2)2— CH2-NH- N-C- (CH2)n— C-N-
N-Pentenoylation and Coupling via bifunctional Reductive amination NHS reagent
Other linkers with or without a spacer group (e.g., CONH(CH2^NH2, COOMe, or polyethylene glycol or derivative) will be familiar to those in the art or in possession of the present disclosure. Alternatively, or in combination with a linker arm, a cyclohexane derivative may be attached at one or both OH.
The methods of the present invention provide for a variety of compounds. For example, in one embodiment is provided an oligosaccharide or glycomimetic compound that contains at least one cyclohexane derivative, wherein the cyclohexane derivative has the formula:
Figure imgf000034_0001
wherein,
R1 is defined as above;
R2 is defined as above; and the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R1 or R2.
In another embodiment is provided a compound comprising:
Figure imgf000034_0002
R1 of the formula may be H1 CrC8 alkanyl, C1-Ce alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, Ci-C8 alkenyl, d-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated
CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; R2 of the formula may be H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is d-C8 alkanyl, C1-C8 alkenyl, CrC8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(=O)NHX or CX2OH, where X = Ci-C8 alkanyl,
CrC8 alkenyl, d-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, CrC8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
R3 of the formula may be -OH,
Figure imgf000035_0001
Figure imgf000035_0002
. -O-C(=O)-X, -NH2, -NH-C(=O)-NHX, or -NH-C(=O)-X where n = 0-2 and X is independently selected from C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl,
Figure imgf000035_0003
Figure imgf000036_0001
Figure imgf000036_0002
and where Q is H or a
Figure imgf000036_0003
physiologically acceptable salt, C1-C8 alkanyl, Ci-C8 alkenyl, C-i-Cβ alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where n = 0-10, and any of the above ring compounds may be substituted with one to three independently selected of Cl, F, CF3, CrC8 alkoxy, NO2, CrC8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, C1-C14 aryl, or OY, C(O)OY, NY2 or C(=O)NHY where Y is H, C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, or C1-Ci4 aryl; R4 of the formula may be
Figure imgf000037_0001
Figure imgf000037_0002
6'sulfated GIcNAc, 6'carboxylated GIcNAc, 6'sulfated GaINAc, 6'sulfated galactose, 6'carboxylated galactose,
where Q is H or a physiologically acceptable salt or
Figure imgf000037_0003
CrC8 alkanyl, CrC8 alkenyl, d-C8 alkynyl, aryl, heteroaryl, (CH2)n-aryl or (CH2)n-heteroaryl where n is 1-10, and where R9 is aryl, heteroaryl, cyclohexane, t-butane, adamantane, or triazole, and any of R9 may be substituted with one to three independently selected of Cl1 F, CF3, CrC8 alkoxy, NO2, Ci-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl or OY, C(=O)OY, NY2 or C(=O)NHY where Y is H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl or CrC14 aryl; or
Figure imgf000037_0004
where R >10 is one of
Figure imgf000038_0001
Figure imgf000038_0002
Figure imgf000038_0003
where Q is H or a physiologically acceptable salt, CrC8 alkanyl, CrCs alkenyl, CrCs alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, n = 1 - 4, Z and Y = d-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl and heteroaryl substituted with Me, OMe, halide, OH; and
R5 of the formula may be H, D-mannose, L-galactose, D-arabinose,
polyols, L-fucose, where X = CF3, cyclopropyl
Figure imgf000038_0004
or CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10,
or where Q is H or a physiologically acceptable
Figure imgf000039_0001
salt,
CrC8 alkanyl, CrC8 alkenyl, Ci-C8 alkynyl, aryl, heteroaryl,
(CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where R11
is aryl, heteroaryl,
Figure imgf000039_0002
Figure imgf000039_0003
Figure imgf000039_0004
where Q is H or a physiologically acceptable salt, CrC8 alkanyl, CrC8 alkenyl, C1-C8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where n = 0-10, and any one of the above ring compounds may be substituted with one to three independently selected of Cl, F, CrCs alkanyl, CrC8 alkenyl, CrC8 alkynyl or OY where Y is H, CrC8 alkanyl, Ci-C8 alkenyl or CrC8 alkynyl.
In another embodiment is provided a compound consisting of:
Figure imgf000040_0001
R1 is H, CrC8 alkanyl, CrC8 alkenyl, Ci-Ce alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, CrC8 alkanyl, d-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH;
R2 is H, CrC8 alkanyl, CrC8 alkenyl, d-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me1 OMe, halide, OH, or NHX where X = H, Ci-Ce alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(=O)NHX or CX2OH, where X = d-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH;
O(=O)X, OX, NHX, NH(=O)X, where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
Figure imgf000041_0001
X
N-N
-O-C(=O)-X, -NH2, -NH-C(=O)-NHX, or -NH-C(=O)-X where n = 0-2 and X is independently selected from CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl,
Figure imgf000041_0002
Figure imgf000042_0001
Figure imgf000042_0002
where Q is H or a
Figure imgf000042_0003
physiologically acceptable salt, CrC8 alkanyl, Ci-C8 alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where n = 0-10, and any of the above ring compounds may be substituted with one to three independently selected of Cl, F, CF3, CrC8 alkoxy, NO2, C1-C8 alkanyl, Ci-C8 alkenyl, CrC8 alkynyl, C1-Ci4 aryl, or OY, C(=O)OY, NY2 or C(=O)NHY where Y is H, CrC8 alkanyl, C1-C8 alkenyl, CrC8 alkynyl, or CrC14 aryl;
Figure imgf000042_0004
6'sulfated GIcNAc, 6'carboxylated GIcNAc, 6'sulfated GaINAc, 6'sulfated galactose, 6'carboxylated galactose,
where Q is H or a physiologically acceptable salt or
Figure imgf000043_0001
C1-C8 alkanyl, CrCe alkenyl, CrCe alkynyl, aryl, heteroaryl, (CH2)n-aryl or (CH2)n-heteroaryl where n is 1-10, and where R9 is aryl, heteroaryl, cyclohexane, t-butane, adamantane, or triazole, and any of R9 may be substituted with one to three independently selected of Cl, F, CF3, C1-C8 alkoxy, NO2, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl or OY, C(=O)OY, NY2 or C(=O)NHY where Y is H, d-C8 alkanyl, CrC8 alkenyl, C1-C8 alkynyl or C1-C14 aryl; or
Figure imgf000043_0002
where R10 is one of
Figure imgf000043_0003
Figure imgf000044_0001
where Q is H or a physiologically acceptable salt, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, n = 1 - 4, Z and Y = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl and heteroaryl substituted with Me, OMe, halide, OH; and
R is H,, D u--mmaanπnπoussee,, L ι_--galactose, D-arabinose, L-fucose, polyols,
where X = CF3, cyclopropyl or CrC8
Figure imgf000044_0002
alkanyl,
C1-C8 alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10,
or where Q is H or a physiologically acceptable
Figure imgf000044_0003
salt,
CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl, heteroaryl,
(CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where R11
is aryl, heteroaryl,
Figure imgf000044_0004
Figure imgf000045_0001
Figure imgf000045_0002
where Q is H or a physiologically acceptable salt, C1-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where n = 0-10, and any one of the above ring compounds may be substituted with one to three independently selected of Cl, F, Ci-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl or OY where Y is H, CrC8 alkanyl, d-C8 alkenyl or CrC8 alkynyl.
In another embodiment is provided a compound having the formula:
Figure imgf000046_0001
where Q is H or a physiologically acceptable salt, and Me is methyl.
In another embodiment is provided a compound having the formula:
Figure imgf000046_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
In another embodiment is provided a compound having the formula:
Figure imgf000047_0001
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl. In another embodiment is provided a compound having the formula:
Figure imgf000047_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
In another embodiment is provided a compound having the formula:
Figure imgf000048_0001
where Q is H or a physiologically acceptable salt, and Me is methyl.
In another embodiment is provided a compound having the formula:
Figure imgf000048_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl. In another embodiment is provided a compound having the formula:
Figure imgf000049_0001
where Me is methyl.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000049_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000050_0001
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000050_0002
where Q is H or a physiologically acceptable salt, and Me is methyl.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000051_0001
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000051_0002
where Q is H or a physiologically acceptable salt, and Me is methyl.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000051_0003
where Me is methyl, Et is ethyl, and Bz in benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000052_0001
where Me is methyl and Bz in benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
In an embodiment, the present invention provides a compound having the formula:
Figure imgf000052_0002
where Me is methyl, Et is ethyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol. In an embodiment, the present invention provides a compound having the formula:
Figure imgf000053_0001
where Me is methyl and Bz is benzoyl. The compound may include a polyethylene glycol attached thereto. Alternatively, multimers may be formed whereby the compound is attached to another of the compound by polyethylene glycol.
For the compounds described herein, a free acid substituent, e.g., CO2H and (O=)S(=O)OH, encompasses a sodium salt of the acid, e.g., COONa and (O=)S(=O)ONa, and vice versa. Furthermore, a sodium salt of the acid is merely representative and any physiologically acceptable acid salt (e.g., Li, K, Mg and Ca) is encompassed. In addition, for the compounds described herein, a free acid substituent (or salt thereof) may be modified as an ester (e.g., alkanyl ester) or as an amide or amide-like (e.g., CONHOH). For the compounds described herein (both generically and specifically), a polyethylene glycol (PEG), including derivatives thereof, may be attached to a compound. Alternatively, multimers of the same compound or different compounds of the compounds described herein (i.e., two or more compounds joined to one another) may be formed using PEG. Examples of particular compounds amenable to the attachment of a PEG or to the formation of a multimer including PEG, are disclosed above as embodiments of the present invention. Procedures for preparing a pegylated compound or pegylated multimers will be familiar to those in the art or in possession of the present disclosure. Examples are depicted in Figure 10 (a pegylated compound) and Figure 11 (a pegylated tetramer).
The following Examples are offered by way of illustration and not by way of limitation.
EXAMPLES
EXAMPLE 1 SYNTHESIS OF GICNAC MIMIC FROM TETRAHYDROPHTHALIC ANHYDRIDE (Fig. 1 )
Synthesis of intermediate I: Amberlyste 15 (50.0 g) was placed in a flask and dried in high vacuo for 1 h. Methanol (1 I) was added, followed by cis-1 ,2,3,6- tetrahydrophthalic anhydride (50.0 g, 328 mmol) and trimethylorthoformate (100 ml, 914 mmol). The reaction mixture was then vigorously stirred. After 5 days, additional trimethylorthoformate (50 ml, 457 mmol) was added. The reaction was stopped after 9 days (TLC-control: petroleum ether/Et2θ, 1 :2), filtered over celite and washed with methanol. The solvent was removed in vacuo (20 mbar). The brown residue was transferred with CH2Cb (150 ml) into a separation funnel and washed with satd. NaHCO3 solution and brine (each 150 ml). The aqueous layers were extracted 3 times with CH2CI2 (3x 150 ml). The combined organic layers were dried over Na2SO^ filtered and concentrated in vacuo (20 mbar) to afford diester I as a brownish oil (57.5 g, 88%).
Synthesis of intermediate II:
To a stirred suspension of diester I (2.00 g, 10.1 mmol) in pH 7.00 phosphate buffer solution (103 ml, 0.07 M), PLE (8.00 mg, 216 units) was added. The pH was kept at 7 by adding continuously NaOH solution (1.0 M) via syringe pump. The reaction was stirred at 2O0C until one equivalent of NaOH (10 ml) was used (56.5 h, TLC-control: petroleum ether/Et2O, 1 :2). The reaction mixture was transferred into a separation funnel with ethyl acetate (100 ml). The layers were separated and the organic layer was extracted twice with pH 7.00 phosphate buffer solution (2x 60 ml). The combined aqueous layers were acidified to pH 2 with 1 M HCI solution and extracted four times with ethyl acetate (4x 150 ml). To separate the layers NaCI was added. The combined organic layers were dried over Na2SO4, filtered and concentrated in vacuo to afford the monoester Il as a yellowish oil (1.67 g, 90%). 96.0% ee. (GC), 96.4% ee. (rot.), [α]D 21 + 15.23° (c = 0.195, EtOH), (Lit. + 15.8° (c = 0.2, EtOH), [Angew. Chem. Int. Ed. Engl., 1984, 23, 142]).
Synthesis of intermediate III:
A solution of monoester Il (0.992 g, 5.38 mmol) in dry CH2CI2 (18 ml) was treated with (COCI)2 (0.7 ml, 8.15 mmol) and DMF (14 μl), stirred for 3 h at r.t. and evaporated (rotavapor purged with argon). A solution of the residue in dry THF (20 ml) was added dropwise over a period of 20 minutes to a boiling suspension of 2-mercaptopyridine-1 -oxide sodium salt (974.8 mg, 6.49 mmol), t-BuSH (3.1 ml, 27.5 mmol), and 4-DMAP (26.3 mg, 0.216 mmol) in dry THF (50 ml). The solution was stirred at reflux for 3h (TLC-control:, petroleum ether/Et2O, 10:1). The reaction mixture was then cooled down to r.t. (room temperature) and transferred into a separation funnel with ethyl acetate (50 ml) and washed with water (100 ml). The aqueous layer was extracted twice with ethyl acetate (2x 100 ml). The combined organic layers were dried: over Na2SO4, filtered and concentrated in vacuo (200 mbar). The crude product was purified by column chromatography (petroleum ether/Et2O, 30:1 to 15:1 ) to afford methylester III as a yellowish oil (584.9 mg, 83%). [α]D 21 + 78.23° (c = 1.010, CHCI3).
Synthesis of intermediate IV:
To a stirred suspension of methylester III (5.19 g, 37.0 mmol) in pH 7.00 phosphate buffer solution (520 ml, 0.07 M), PLE (51.2 mg, 1382 units) was added. The pH was kept at 7 by adding NaOH solution (1.0 M) via syringe pump. The reaction was stirred at r.t. until one equivalent of NaOH (37 ml) was used (11 h, TLC-control: petroleum ether/Et2θ, 1 :1 ). The reaction mixture was transferred into a separation funnel and washed twice with ethyl acetate (2x 300 ml). The layers were separated and the organic layers were extracted twice with pH 7.00 phosphate buffer solution (2x 300 ml). The combined aqueous layers were acidified to pH 2 with aqueous HCI (30 ml, 4 M) and extracted three times with ethyl acetate (3x 400 ml). The combined organic layers were dried over Na2SO4, filtered and concentrated in vacuo (100 mbar). The crude product was filtered through a short plug of silica affording acid IV as a pale yellowish oil (3.92 g, 84%). 96.3% ee. (GC), 94.3% ee. (rot.), [α]D 21 + 89.12° (c = 6.730, MeOH), (Lit. + 94.5° (c = 7, MeOH), [Acta Chem. Scand., 1970, 24, 2693]).
Synthesis of intermediate V: Acid IV (8.30 g, 65.7 mmol) was placed in a flask purged with argon and suspended in water (180 ml). The reaction mixture was cooled down to O0C and NaHCO3 (16.6 g, 197 mmol) was added, followed by a solution of Kl (65.4 g, 394 mmol) and iodine (17.5 g, 68.9 mmol) in water (150 ml). The reaction was stirred at r.t. for 24 h and then extracted three times with CH2CI2 (3x 60 ml). The combined organic layers were washed with a solution of
Na2S2O3 (50 g) in water (250 ml). The aqueous layer was extracted twice with CH2CI2 (2x 60 ml). The combined organic layers were protected from light, dried over Na2SO4, filtered and concentrated in vacuo (20 mbar) and quickly in high vacuo to afford iodolactone V as an off-white solid (15.79 g, 95%). [α]o21 + 35.96° (c = 0.565, CHCI3).
Synthesis of intermediate Vl:
Iodolactone V (15.73 g, 62.2 mmol) was dissolved in dry THF (340 ml). Then DBU (14 ml, 93.3 mmol) was added and the mixture was refluxed for 20 h (TLC-control: petroleum ether/Et2O, 1 :1 ). The reaction mixture was cooled down to r.t., transferred with Et2O (200 ml) into a separation funnel and extracted with aqueous HCI (400 ml, 0.5 M) and brine (400 ml). The aqueous layers were extracted three times with Et2O (3x 200 ml). The combined organic layers were dried over Na2SO4, filtered and concentrated in vacuo (350 mbar). The crude product was purified by column chromatography (petroleum ether/CH2CI2/Et20, 20:5:1 to 8:5:1) to afford lactone Vl as a yellowish oil (7.28 g, 94%). [α]D 21 + 187.31 ° (c = 1.080, CHCI3).
Synthesis of intermediate VII: NaHCO3 (4.36 g, 51.8 mmol) was dried in high vacuum for 2 h.
Then, freshly distilled methanol (268 ml) was added followed by lactone Vl (6.38 g, 51.4 mmol). The reaction mixture was then stirred under argon for 12 h (TLC-control: petroleum ether/Et2O, 1 :1 ). The solvent was evaporated and the residue transferred into a separation funnel with CH2CI2 (60 ml) and extracted with water (60 ml) and brine (60 ml). The aqueous layers were extracted twice with CH2CI2 (2x 60 ml). The combined organic layers were dried over Na2SO4, filtered and concentrated in vacuo (50 mbar) to obtain the alcohol as a yellowish oil (7.77 g, 96%). To a solution of the alcohol in dry CH2CI2 (150 ml), tert-butyldimethylsilyl chloride (14.93 g, 99 mmol) was added in small portions, followed by DBU (18.4 ml, 123.4 mmol). The reaction was stirred at r.t for 12 h (TLC-control: petroleum ether/Et2O, 20:1 ) and then quenched with methanol (20 ml). The reaction mixture was transferred into a separation funnel with CH2CI2 (100 ml), washed with satd. NaHCO3 solution (100 ml) and brine (100 ml). The aqueous layers were extracted twice with CH2CI2 (2x 100ml). The combined organic layers were dried over Na2SO4, filtered and evaporated (200 mbar). The crude product was purified by column chromatography (petroleum ether/Et2O, 40:1 to 20:1 ) to afford silylether VII as a colourless oil (13.96 g, quantitative yield). [α]D 21 + 1.97° (c = 1.045, CHCI3). Synthesis of intermediate VIII:
A solution of silylether VII (1.21 g, 4.47 mmol) in CH2CI2 (36 ml) was cooled to 1O0C, then m-CPBA (1.92 g, 11.1 mmol) was added in one portion. The reaction mixture was stirred at 1O0C for 15 h. Over a period of 2 hours the temperature was raised to r.t and the reaction stopped (TLC-control: petroleum ether/Et2O, 5:1 ). The mixture was diluted with CH2CI2 (150 ml) and transferred into a separation funnel. The excess of m-CPBA was destroyed by washing twice with satd. Na2S2O3 solution (2x 150 ml). The organic layer was successively washed with satd. NaHCO3 solution (150 ml) and brine (150 ml). The aqueous layers were extracted twice with CH2CI2 (2x 100 ml). The combined organic layers were dried over Na2SO4, filtered and concentrated in vacuo. The crude product was purified by column chromatography (petroleum ether/Et2O, 12:1 to 10:1 ) to obtain epoxide VIII as yellowish oil (1.001 g, 78%). [α]D 21 - 25.60 (c = 0.985, CHCI3).
Synthesis of intermediate IX:
CuCN (635.4 mg, 7.09 mmol) was dried in high vacuo at 15O0C for 30 minutes, suspended in dry THF (10 ml) and cooled down to -780C. MeLi (1.6 M in Et2O, 8.90 ml, 14.2 mmol) was slowly added via syringe and the temperature was raised over a period of 30 minutes to -1O0C. The mixture was again cooled down to -780C followed by the addition of freshly distilled BF3 etherate (360 μl) in THF (2 ml). After stirring for 20 minutes, epoxide VIII (408.0 mg, 1.42 mmol) in THF (10 ml) was added. The reaction was stopped after 5 h stirring at -780C (TLC-control: petroleum ether/Et2O, 3:1 ). The excess of MeLi was quenched with a mixture of methanol (4 ml) and triethylamine (4 ml). The mixture was transferred with Et2O (100 ml) into a separation funnel and extracted with 25% aq. NH3/satd. NH4CI (1 :9) solution. The organic layer was then successively washed with brine (60 ml), 5% acetic acid (60 ml), satd. NaHCO3 solution (60 ml) and brine (60 ml). The aqueous layers were extracted twice with Et2O (2x 100 ml). The combined organic layers were dried over Na2SO4, filtered and concentrated in vacuo (20 mbar). The crude product was purified by column chromatography (petroleum ether/Et2θ, 10:1 to 8:1 ) to afford GlcA/Ac-mimic IX as a reddish oil (337.0 mg, 78%). [α]D 21 - 28.34° (c = 1.020, CHCI3).
Synthesis of intermediate X:
After a mixture of IX (347.5 mg, 1.15 mmol), ethyl 2,3,4-tri-O- benzyl-L-fucothiopyranoside (1.111 g, 2.32 mmol), (Bu)4NBr (1.122 g, 3.48 mmol), 2,6-di-teAf-butyl-4-methylpyridine (713.3 mg, 3.47 mmol), and powdered 4A molecular sieves (3 g) in CH2CI2 (12 ml) and DMF (3 ml) was stirred at r.t. under Ar for 4 h, CuBr2 (775.9 mg, 3.47 mmol) was added and the reaction mixture was stirred at r.t. for 20 h (TLC-control: toluene/petroleum ether/EtOAc, 3:3:1 ). The reaction mixture was filtered over Celite and the filtrate was diluted with CH2CI2 (20 ml). The organic layer was washed with satd. NaHCO3 solution and brine (each 40 ml) and the aqueous layers were extracted three times with CH2CI2 (3 x 40 ml). The combined organic layers were dried with Na2SO4, filtered and co-evaporated with toluene to dryness. The residue was purified by column chromatography (petroleum ether/Et2O, 7:1 to 5:1 ) to yield compound X as a yellowish oil (631.4 mg, 76%). [α]D 21 - 40.66° (c = 0.790, CHCI3).
Synthesis of intermediate Xl: To a solution of disaccharide mimic X (139.5 mg, 0.194 mmol) in
THF (5 ml), TBAF (390 μl, 0.390 mmol) was added. After 26 h additional TBAF (200 μl, 0.200 mmol) was added, and the solution was continued stirring. The reaction was stopped after 50 h and concentrated in vacuo (TLC-control: petroleum ether/ethyl acetate, 5:1 ). The crude product was purified by column chromatography (petroleum ether/ethyl acetate, 3:1 ) to afford the unprotected disaccharide mimic Xl as a white solid (95.7 mg, 81%). [α]D 21 - 43.03° (c = 1.090, CHCI3). Synthesis of intermediate XII:
Dry CH2CI2 (16 ml) was added to a mixture of the thioglycoside (562.3 mg, 0.719 mmol), glycosyl acceptor Xl (335.6 mg, 0.555 mmol) and activated 4A molecular sieves (4 g) under argon atmosphere. A suspension of DMTST (440.6 mg, 1.706 mmol) and activated 4A molecular sieves (2 g) in CH2CI2 (8 ml) was prepared in a second flask. Both suspensions were stirred at room temperature for 4 h, before adding the DMTST suspension via syringe to the other suspension with some additional CH2CI2 (1 ml). The reaction was stopped after 63 h (TLC-control: petroleum ether/Et2O, 1 :1 ), and filtered through celite, washing with CH2CI2. The filtrate was successively washed with satd. solution of NaHCO3 (40 ml) and water (100 ml). The aqueous layers were three times extracted with DCM (3 x 60 ml). The combined organic layers were dried with Na2SO4, filtered and concentrated in vacuo. The crude product was purified by repeated column chromatography (petroleum ether/Et2O, 1 :1 ) to afford tetrasaccharide XII as a white foam (484.9 mg, 66%). [α]D 21 - 52.80 (c = 1.050, CHCI3).
Synthesis of product XIII:
A mixture of XII (132.5 mg, 0.100 mmol), Pd(OH)2/C (50 mg), dioxane (3 ml) and water (0.75 ml) was hydrogenated in a Parr-shaker under 4 bar at r.t. After 20 h the mixture was filtered through Celite and set up with new Pd(OH)2/C (50 mg) for another 26 h, after which TLC control indicated completion of the reaction. The reaction mixture was filtered over Celite and evaporated to dryness. The residue was redissolved in methanol (4 ml) and sodium methanolate (0.150 mmol in 160 μl MeOH) was added. After stirring at r.t. for 16 h the reaction was quenched by addition of acetic acid (17 μl). The mixture was concentrated in vacuo and purified by preparative, reversed-phase HPLC to afford compound XIII as a white solid (57.1 mg, 76%). [α]D 21 - 85.02° (c = 0.570, MeOH). EXAMPLE 2 SYNTHESIS OF GICNAC MIMICS FROM CYCLOHEXENON (Fig. 2)
Synthesis of intermediate XIV:
2-Cyclohexenone (9.8 ml, 101 mmol) was dissolved in CH2Cb (250 ml) in a light protected flask, then the solution was cooled to 0° C. Bromine (5.4 ml, 105 mmol) in CH2CI2 (100 ml) was added via dropping funnel over 35 min. The clear yellow solution was stirred at 0 0C for 2.5 h, then Et3N (23.1 ml, 166 mmol) in CH2CI2 (20 ml) was added portion-wise via dropping funnel, causing a colour change from clear yellow to brown with precipitate. The mixture was stirred at room temperature for 2 h, then stopped. The reaction mixture was diluted with CH2CI2 (50 ml) and washed twice with HCI 3% (2 x 50 ml). The aqueous layers were extracted with CH2CI2 (2 x 25 ml) and the combined organic layers were washed with a mixture of brine (80 ml) and water (100 ml). The layers were separated and the aqueous layer was extracted with CH2CI2 (2 x 50 ml). The combined organic layers were concentrated in vacuo to afford a brown residue still dissolved in a few ml of CH2CI2, and was then treated with activated charcoal and filtered through celite. The clear green mixture was concentrated to dryness. Recrystallization from hexane/EtOAc (100 ml:few drops) gave offwhite crystals. The crystals were dried in a desiccator for 12 h affording bromide XIV (11.0 g, 62.8 mmol, 62%). 1H-NMR (CDCI3, 500.1 MHz): δ = 2.07 (m, 2 H, H-5), 2.45 (m, 2 H, H-4), 2.63 (m, 2 H, H-6) , 7.42 (t, 3J = 4.4 Hz, 1 H, H-3).
Synthesis of intermediate XV:
(S)-α,α-diphenylprolinol (290 mg, 1.14 mmol) was dissolved in THF (20 ml) in a flame dried, light protected flask, then under stirring B(OMe)3 (153 μl, 1.37 mmol) was added via syringe to the solution. The mixture was stirred for 1 h at room temperature, before BH3 Λ/,Λ/-diethylaniline (2.00 ml, 11.2 mmol) was added and the resulting solution cooled to -10 0C. A solution of bromide XIV (2.00 g, 11.4 mmol) in THF (15 ml) was then added over 45 min. The clear yellow mixture was stirred for 3 h at 0 0C. After complete conversion of the ketone the reaction was quenched with HCI (1 M, 20 ml). The resulting mixture was diluted with CH2Cb (40 ml) and water (50 ml). After separation the organic layer was washed with brine (20 ml) and both aqueous layers were extracted twice with CH2CI2 (2 x 25 ml). The combined organic layers were dried with Na2SO-I and concentrated in vacuo. Chromatographic purification of the crude product (petroleum ether/Et2O, 2:1 to 1.5:1 ) gave XV (1.89 g, 10.7 mmol, 93%) as a colourless oil and with an optical yield of 96% ee determined by optical rotation and derivatisation with (1 f?)-(-)-MTPA-CI. [α]D 21 = +83.0 (c = 1.01 ; CHCI3); 1H-NMR (CDCI3, 500.1 MHz): δ = 1.59-1.66 (m, 1 H1 H-5a), 1.69-1.77 (m, 1 H, H-5b), 1.86-1.97 (m, 2 H, H-6a, H-6b), 2.00-2.07 (m, 1 H, H-4a), 2.09-2.16 (m, 1 H, H-4b), 2.26 (m, 1 H, OH), 4.20 (m, 1 H, H-1 ), 6.19 (t, 3J = 4.0 Hz, 1 H, H-3).
Synthesis of intermediate XVI:
XV (7.33 g, 41.4 mmol) was dissolved in Et2O (43 ml) in a flame dried flask equipped with a dropping funnel. terf-BuLi (1.7 M in pentane, 133 mmol) was dropwise added at -78 0C over 1 h and 15 min. After complete addition, the clear yellowish mixture was stirred for further 1 h and 30 min at - 78 0C and was then warmed up to -20 0C over 3 hrs and 15 min. The reaction was quenched by addition of satd. solution of NaHCO3 (50 ml) and stirred for a further hour at room temperature. The reaction was diluted by addition of water (20 ml) and Et2O (20 ml). The layers were separated and the aqueous layer extracted twice with Et2O (2 x 30 ml). The combined organic layers were dried with Na2SO4 and concentrated in vacuo (>200 mbar) to afford a yellow mixture (still presence of solvent) which was purified by column chromatography (petroleum ether/Et2O, 2:1 to 1 :1 ). The product was mostly concentrated in vacuo (>200 mbar), then the rest of the solvent was removed by distillation under argon with vigreux column to afford alcohol XVI (3.39 g, 34.6 mmol, 85%) as a clear brown oil. [α]D 21 = +117.7 (c = 0.95; CHCI3); 1H-NMR (CDCI3, 500.1 MHz): δ = 1.53-1.64 (m, 3 H, H-5a, H-6a, OH), 1.68-1.77 (m, 1 H, H-5b), 1.87 (m, 1 H, H-6b), 1.92-2.06 (m, 2 H, H-4a, H-4b), 4.19 (s, 1 H, H-1 ), 5.74 (del, 3J = 2.4, 10.0 Hz, 1 H, H-2), 5.82 (m, 1 H, H-3).
Synthesis of intermediate XVII:
Alcohol XVI (1.51 g, 15.3 mmol) was stirred in CH2CI2 (35 ml) at room temperature. Trityl chloride (9.54 g, 34.2 mmol) was added to the mixture, then DBU (5.9 ml, 39.5 mmol) was added via syringe. The brown mixture was stirred for 45 h, then stopped. The reaction mixture was diluted with CH2CI2 (50 ml) and washed with satd. solution of NaHCO3 (50 ml). The layers were separated and the aqueous layer was extracted twice with CH2CI2 (2 x 25 ml). The combined organic layers were dried with Na2SO4 and concentrated to dryness. The resulting viscous brown oil was purified by column chromatography (petroleum ether/toluene, 11 :1 to 4:1 ) affording tritylether XVII (3.72 g, 10.9 mmol, 71%) as a yellow solid. [α]D 21 = +74.6 (c = 1.15; CHCI3); 1H-NMR (CDCI3, 500.1 MHz): δ = 1.31-1.41 (m, 3 H, H-5a, H-6), 1.68-1.76 (m, 1 H, H-5b), 1.80 (m, 1 H, H-4a), 1.98 (m, 1 H, H-4b), 4.06 (s, 1 H, H-1 ), 5.03 (m, 1 H, H-2), 5.61 (m, 1 H, H-3), 7.21-7.54 (m, 15 H, 3 C6H5); elemental analysis calcd (%) for C25H24O (340.46): C 88.20, H 7.10; found: C 88.01 , H 7.29.
Synthesis of intermediate aπft-XVIII:
Tritylether XVII (948 mg, 2.79 mmol) was dissolved under argon atmosphere in CH2CI2 (30 ml) and NaHCO3 (281 mg, 3.34 mmol) was added. The mixture was cooled to 0 0C and under stirring m-chloroperbenzoic acid (70 %, 960 mg, 5.56 mmol) was added. After stirring for 1.5 h the reaction temperature was gradually raised to room temperature and the mixture was stirred for another 3.5 h. The reaction was diluted with CH2CI2 (50 ml) and transferred to a separation funnel. The excess of m-chloroperbenzoic acid was destroyed by washing with satd. solution of Na2S2Oa (2 x 150 ml); The organic layer was then successively washed with satd. Na2CO3 solution (150 ml) and brine (150 ml). The aqueous layers were each time extracted with CH2CI2 (2 x 50 ml). The combined organic layers were dried with Na2SO4 and concentrated in vacuo. The crude product was purified by column chromatography (petroleum ether/EtOAc, 20:1 to 15:1 ) affording epoxide antf-XVIII;(714 mg, 2.00 mmol, 72 %) as colourless solid. [α]D 21 = +26.6 (c = 0.67; CHCI3); 1H-NMR (CDCI3, 500.1 MHz): 5 = 1.02-1.11 (m, 1 H, H-5a), 1.15-1.22 (m, 1 H, H-6a), 1.37-1.43 (m, 1 H, H-5b), 1.53 (m, 1 H, H-6b), 1.64-1.71 (m, 1 H, H-4a), 1.90 (m, 1 H, H-4b), 2.25 (m, 1 H, H-2). 2.97 (m, 1 H, H-3), 3.86 (m, 1 H, H-1 ), 7.23-7.53 (m, 15 H, 3 C6H5); elemental analysis calcd (%) for C25H24O2 (356.46): C 84.24, H 6.79; found: C 83.86, H 6.85.
Synthesis of intermediate XIX:
Copper(l) iodide (499 mg, 2.62 mmol) was dried at high vacuo at 200 0C for 30 minutes, then flushed with argon and suspended in dry diethylether (10 ml). After cooling to - 20 0C MeLi (1.6 M in ether, 3.26 ml, 5.22 mmol) was slowly added and the solution was stirred for 15 minutes. A solution of epoxide anf/-XVIII (310 mg, 0.870 mmol) in diethylether (7 ml) was added to the cuprate. After stirring for 30 minutes at -20 0C the reaction mixture was slowly brought to room temperature and stirred for one week. The reaction was diluted with te/ϊ-butyl methyl ether (10 ml) and quenched at 0 0C with satd. solution of NaHCO3 (10 ml). The reaction mixture was further diluted and extracted with te/t-butyl methyl ether and satd. solution of NaHCO3 (each 20 ml). The aqueous layer was extracted twice with terf-butyl methyl ether (2 x 50 ml). The combined organic layers were dried with Na2SO4 and concentrated. The residue was purified by flash chromatography (petroleum ether/EtOAc/Et3N, 13:1 :0.07) to yield XIX (206 mg, 64 %) as yellowish resin. [α]D 21 = -57.6 (c = 0.52; CHCI3); 1H-NMR (CDCI3, 500.1 MHz): δ = 0.78 (m, 1 H, H-5a), 0.94 (m, 1 H1 H-4a), 1.00 (d, 3J= 6.4 Hz, 3 H, CH3), 1.17 (m, 1 H, H-3), 1.32 (m, 1 H, H-6a), 1.40 (m, 1 H, H-5b), 1.46-1.49 (m, 2 H, H-4b, H-6b), 2.67 (s, 1 H, OH), 2.83 (ddd, 3J= 4.1 , 8.6, 11.1 Hz, 1 H, H-1 ), 3.32 (t, 3J= 9.2 Hz, 1 H, H-2), 7.21-7.30, 7.49-7.50 (m, 15 H, 3 C6H5); elemental analysis calcd (%) for C26H28O2 (372.51 ): C 83.83, H 7.58; found: C 83.51 , H 7.56.
Synthesis of intermediate XX:
A solution of Br2 (43 μl, 0.837 mmol) in CH2CI2 (1 ml) was added dropwise at 0 0C to a solution of ethyl 2,3,4-tri-O-benzyl-L-fucothiopyranoside (349 mg, 0.729 mmol) in CH2CI2 (2 ml). After stirring for 50 min at 0 0C, cyclohexene (100 μl) was added and the solution stirred for another 20 min. The mixture was dropwise added to a solution of XIX (208 mg, 0.558 mmol) and Et4NBr (154 mg, 0.733 mmol) in DMF/CH2CI2 (10 ml, 1 :1 ) which has been stirred with activated 3A molecular sieves (850 mg) for 2 h. The mixture was stirred for 14 h at room temperature. The reaction was quenched with pyridine (1 ml) and filtered over celite with addition of CH2CI2 (20 ml). The solution was washed with brine (40 ml) and the aqueous layer was extracted with CH2CI2 (3 x 30 ml). The combined organic phases were dried with Na2SO4, the solvent was removed azeotropic with toluene, and the residue was purified by flash chromatography (petroleum ether/toluene/ethyl acetate/Et3N, 20:5:1 :0.26) to afford 254 mg (58 %, 0.322 mmol) of XX as colorless foam. [α]D 21 = -36.4 (c = 0.51 ; CHCI3); 1H-NMR (CDCI3, 500.1 MHz): δ = 0.81 (d, 3J= 6.5 Hz, 3 H, Fuc H-6), 1.05 (m, 1 H, H-6a), 1.18 (d, 3J= 7.6 Hz, 3 H, CH3), 1.15-1.28 (m, 2 H, H-4a, H-5a), 1.34 (m, 1 H, H-6b), 1.75 (m, 1 H, H-4b), 1.85-1.90 (m, 2 H, H-3, H-5b), 2.91 (m, 1 H, H-2), 3.52 (m, 1 H, Fuc H-4), 3.64 (m, 1 H, Fuc H-5), 3.76 (dd, 3J=2.7, 10.1 Hz, 1 H, Fuc H-3), 3.81 (m, 1 H, H-1 ), 3.88 (dd, 3J = 3.6, 10.1 Hz, 1 H, Fuc H-2), 4.54 (m, 1 H, CH2Ph), 4.61 (d, 1 H, Fuc H-1 ), 4.61 , 4.64, 4.65, 4.77, 4.92 (5 m, 5 H, 3 CH2Ph), 7.17-7.34, 7.48-7.50 (m, 30 H, 6 C6H5). Synthesis of intermediate XXI:
To a stirred solution of tritylether XX (241 mg, 0.305 mmol) in CH2CI2 (4 ml), ZnBr2 (208 mg, 0.924 mmol) and triethylsilane (55 μl, 0.344 mmol) was added. The reaction was quenched after 8 h by adding 100 μl water. CH2CI2 (10 ml) was added and the reaction mixture extracted with satd. solution of NaHCθ3 (30 ml). After separation the aqueous layer was extracted twice with DCM (2 x 20 ml). The combined organic layers were washed with satd. solution of NaHCO3 (50 ml) and the aqueous layer was extracted twice with DCM (2 x 50 ml). The combined organic layers were dried with Na2SO4 and concentrated in vacuo. Chromatographic purification of the crude product (petroleum ether/toluene/ethyl acetate, 5:5:1 ) gave 140 mg (84 %, 0.256 mmol) of XXI as yellowish solid. [α]D 21 = -35.0 (c = 0.45; CHCI3); 1H-NMR (CDCI3, 500.1 MHz): δ = 0.98 (m, 1 H, H-4a), 1.08 (d, 3J= 6.4 Hz, 3 H, CH3), 1.16 (d, 3J= 6.5 Hz, 3 H1 Fuc H-6), 1.22-1.30 (m, 2 H, H-5a, H-6a), 1.51 (m, 1 H, H-3), 1.61-1.67 (m, 2 H, H-4b, H-5b), 2.00 (m, 1 H, H-6b), 2.87 (t, 3J = 9.3 Hz, 1 H, H-2), 3.37 (m, 1 H, H-1 ), 3.70 (m, 1 H, Fuc H-4), 3.97 (dd, 3J= 2.7, 10.2 Hz, 1 H, Fuc H-3), 4.10-4.14 (m, 2 H, Fuc H-2, Fuc H-5), 4.65, 4.70, 4.76, 4.77, 4.86, 4.99 (6 m, 6 H, 3 CH2Ph), 5.00 (d, 1 H, Fuc H-1 ), 7.25-7.39 (m, 15 H, 3 C6H5); elemental analysis calcd (%) for C34H42O6 (546.69): C 74.70, H 7.74; found: C 74.68, H 7.80.
Synthesis of intermediate XXII:
Dry CH2CI2 (8 ml) was added to a mixture of the thioglycoside (254 mg, 0.325 mmol), the glycosyl acceptor XXI (137 mg, 0.251 mmol) and activated 4A molecular sieves (2 g) under argon atmosphere. A suspension of DMTST (206 mg, 0.798 mmol) and activated 4A molecular sieves (1 g) in
CH2CI2 was prepared in a second flask. Both suspensions were stirred at room temperature for 4 h, before adding the DMTST suspension via syringe to the other suspension. The reaction was stopped after 43 h and filtered through celite, washing with CH2CI2. The filtrate was successively washed with satd. solution of NaHCθ3 (20 ml) and water (60 ml). The aqueous layers were each time extracted with DCM (3 x 30 ml). The combined organic layers were dried with Na2SO4 and concentrated in vacuo. The crude product was purified by column chromatography (petroleum ether/toluene/ethyl acetate, 7:7:1 to 5:5:1 ) to afford 187 mg (59 %, 0.148 mmol) of XXII as colourless foam. [α]D 21 = -51.0 (c = 0.51 ; CHCI3); 1H-NMR (CDCI3, 500.1 MHz): δ = 0.45-1.46 (m, 19 H, CyCH2, MeCy), 1.04 (d, 3J= 6.3 Hz, 3 H1 CH3), 1.44 (d, 3J= 6.4 Hz, 3 H, Fuc H-6), 1.86 (m, 1 H, MeCy), 3.21 (t, 3J= 9.1 Hz, 1 H, H-2), 3.48 (m, 1 H, H-1 ), 3.51 (s. 1 H, Fuc H-4), 3.82 (dd, 3J= 3.3, 9.9 Hz, 1 H, GaI H-3), 3.91 (m, 1 H, GaI H-5), 4.02 (dd, 3J= 3.3, 10.3 Hz, 1 H, Fuc H-2), 4.05 (dd, 3J= 2.3, 10.3 Hz, 1 H, Fuc H-3), 4.12 (dd, 3J= 4.6, 7.9 Hz, 1 H, Lac H-2), 4.24 (dd, 3J= 7.2 Hz, 2J= 11.4 Hz, 1 H, GaI H-6a), 4.26 (m, 1 H, CH2Ph), 4.38 (dd, 3J= 5.7 Hz, 2J= 11.4 Hz, 1 H, GaI H-6b), 4.51 (m, 1 H, CH2Ph), 4.54 (d, 3J= 8.2 Hz, 1 H, GaI H-1 ), 4.63, 4.67, 4.74, 4.77 (4 m, 4 H, 2 CH2Ph), 4.88 (m, 1 H, Fuc H-5), 5.05 (m, 1 H, CH2Ph), 5.06 (d, 3J= 3.5 Hz, 1 H, Fuc H-1 ), 5.11 (m, 1 H, CH2Ph), 5.60 (m, 1 H, GaI H-2), 5.84 (m, 1 H, GaI H-4), 7.17-7.34, 7.42-7.46, 7.52-7.58, 8.03-8.12 (m, 35 H, 7 C6H5); elemental analysis calcd (%) for C77H84Oi6 (1265.48): C 73.08, H 6.69; found: C 73.16, H 6.76.
Synthesis of product XXIII: Pd/C (50 mg, 10 % Pd) was suspended under argon atmosphere in ethanol (3 ml) with a catalytic amount of acetic acid. Compound XXII (101 mg, 79.8 μmol) was added and the resulting mixture was hydrogenated under 70 psi at room temperature. After 1 day another 50 mg of Pd/C were added and hydrogenation was continued for another 5 days. The reaction was quenched with CH2CI2 and filtered on celite, washing with methanol. The filtrate was concentrated under vacuum, redissolved in methanol/water (3:1 , 4 ml) and lithium hydroxide (100 mg, 4.18 mmol) was added. After 2 days stirring the mixture was neutralized with Dowex 50x8 (H+), filtered through a Dowex 50 ion exchanger column (Na+ form) and concentrated in vacuo. The residue was purified by column chromatography (ChbCVmethanol/water, 5:1 :0.1 to 5:2.5:0.25), followed by Sephadex G15 column and lyophilization from dioxane to give 36.5 mg (74 %, 59.4 μmol) of XXIII as colourless foam. [α]D 21 = -84.8 (c = 0.32; MeOH); 1H-NMR (MeOD, 500.1 MHz): δ = 0.87-1.00 (m, 2 H, CyCH2, MeCy), 1.04-1.38 (m, 6 H, CyCH2, MeCy), 1.13 (d, 3J= 6.3 Hz, 3 H, CH3), 1.20 (d, 3J= 6.5 Hz, 3 H, Fuc H-6), 1.55-1.74 (m, 10 H, CyCH2, MeCy), 1.92 (m, 1 H), 2.13 (m, 1 H, MeCy), 3.20 (t, 3J= 9.3 Hz, 1 H, H-2), 3.24 (dd, 3J= 2.8, 9.3 Hz, 1 H, GaI H-3), 3.42 (m, 1 H, GaI H-5), 3.62-3.68 (m, 3 H, GaI H-2, GaI H-6a, H-1 ), 3.70-3.75 (m, 3 H, Fuc H-2, Fuc H-4, GaI H-6b), 3.85 (dd, 3J= 3.3, 10.3 Hz, 1 H, Fuc H-3), 3.88 (m, 1 H, GaI H-4) 4.07 (dd, 3J= 3.1 , 9.3 Hz, 1 H, Lac H-2), 4.29 (d, 3J= 7.8 Hz, 1 H, GaI H-1 ), 4.89 (m, 1 H, Fuc H-5), 5.00 (d, 3J= 3.9 Hz, 1 H, Fuc H-1 ); elemental analysis calcd (%) for C28H4ZNaOi3 • 1 H2O (614.65+18.02): C 53.16, H 7.81 ; found: C 53.22, H 7.91.
EXAMPLE 3 {(1 R,2f?,3S)-2-[(6-DE0XY-α-L-GALACT0PYRAN0SYL)0XY]-3-ETHYL-CYCL0HEX-1 -Yl_} 2-O-BENZOYL-3-O-[(1 S)- 1 -CARBOXY-2-CYCLOHEXYL-ETHYL]-β-D-
GALACTOPYRANOSiDE (A-VIII; FIG. 3)
General procedure A for nucleophilic opening of epoxide A-I with cuprate reagents. CuCN (3.81 mmol) was dried in vacuo at 15O0C for 30 min, suspended in dry THF (10 mL) and cooled to -780C. A solution of the appropriate organo lithium compound (7.63 mmol) was slowly added via syringe and the temperature was raised over a period of 30 min to -2O0C and the mixture stirred at this temperature for 10 min. The mixture was cooled to -780C followed by the addition of freshly distilled BF3 etherate (1.53 mmol) in THF (2 mL). After stirring for 20 min, epoxide A-I (0.761 mmol) dissolved in THF (8 mL) was added. The reaction was slowly warmed to -5O0C over 5 h and then stirred at this temperature for 24 h. After slowly warming the reaction to -300C over another 21 h the reaction was quenched with a 25% aq. NH3/satd. NH4CI (1 :9, 20 mL) solution. The mixture was transferred with Et2O (30 ml_) into a separation funnel and extracted with additional 25% aq. NH3/satd. NH4CI (1 :9, 30 mL) solution. The layers were separated and the organic layer was washed with brine (50 mL). The aqueous layers were extracted with Et2O (2 x 30 mL). The combined organic layers were dried over Na2SO4, filtered and concentrated in vacuo. The crude product was purified by column chromatography (petroleum ether/Et2O, 20:1 to 13:1 , + 1% Et3N) to afford the corresponding GlcA/Ac mimic.
General procedure B for α-fucosylation and detritylation. A solution of Br2 (0.837 mmol) in CH2CI2 (1 mL) was added dropwise at O0C to a solution of ethyl 2,3,4-tri-0-benzyl-1-thio-L-fucopyranoside (A-III, 0.729 mmol) in CH2CI2 (2 mL). After stirring for 50 min at O0C, cyclohexene (100 μL) was added and the solution stirred for another 20 min. The mixture was added dropwise to a solution of the appropriate GlcΛ/Ac mimic (0.558 mmol) and Et4NBr (0.733 mmol) in DMF/CH2CI2 (10 mL, 1 :1 ), which has been stirred with activated 3A molecular sieves (850 mg) for 2 h. The mixture was stirred for 14 h at r.t. The reaction was quenched with pyridine (1 mL) and filtered over celite with addition of CH2CI2 (20 mL). The solution was washed with brine (40 mL) and the aqueous layer was extracted with CH2CI2 (3 x 30 mL). The combined organic phases were dried with Na2SO4, filtered and the solvents were removed azeotropically with toluene. The residue was purified by flash chromatography (petroleum ether/diethyl ether, 12:1 to 7:1 , + 1% Et3N) to afford the fucosylated tritylether. To a stirred solution of the tritylether (0.305 mmol) in CH2CI2 (4 mL), ZnBr2 (0.924 mmol) and triethylsilane (0.344 mmol) were added. The reaction was quenched after 8 h by adding water (100 μL). CH2CI2 (10 mL) was added and the reaction mixture extracted with satd. aqueous NaHCO3 (30 mL). The aqueous layer was extracted with DCM (2 x 20 mL). The combined organic layers were washed with satd. aqueous NaHCO3 (50 mL) and the aqueous layer was extracted with DCM (2 x 50 mL). The combined organic layers were dried with Na2SO4, filtered and concentrated in vacuo. Chromatographic purification of the crude product (petroleum ether/toluene/ethyl acetate, 7:7:1 to 4:4:1 ) afforded the corresponding disaccharide mimic.
General procedure C for DMTST promoted qlvcosylations.
A solution of the thioglycoside A-Vl (0.292 mmol) and the appropriate glycosyl acceptor (0.225 mmol) in dry CH2CI2 (8 mL) was added via syringe to activated 3A molecular sieves (2 g) under argon. A suspension of dimethyl(methylthio)sulfonium triflate (DMTST) (0.685 mmol) and activated 3A molecular sieves (1 g) in CH2CI2 (4 mL) was prepared in a second flask. Both suspensions were stirred at r.t. for 4 h, then the DMTST suspension was added via syringe to the other suspension with some additional CH2CI2 (2 ml). The reaction was stopped after 2 d, filtered through celite and the celite washed with CH2CI2 (10 mL). The filtrate was successively washed with satd. aqueous NaHCU3 (25 mL) and water (40 mL). The aqueous layers were extracted with CH2CI2 (3 x 25 mL). The combined organic layers were dried with Na2SO4, filtered and concentrated in vacuo. The crude product was purified by column chromatography (petroleum ether/toluene/ethyl acetate, 10:10:1 to 5:5:1 ) to afford the corresponding tetrasaccharide mimic as a colorless foam.
General procedure D for deprotection with Pd(OHWC and sodium methoxide.
Pd(OH)2/C (50 mg, 10% Pd) was suspended under argon in dioxane/H2O (4:1 , 3.75 mL). The appropriate protected compound (77.7 μmol) was added and the resulting mixture was hydrogenated under 70 psi at r.t. After 24 h the mixture was filtered through celite and reacted with 'fresh Pd(OH)2/C (50 mg) for additional 48 h, until TLC control indicated completion of the reaction. The reaction mixture was filtered through celite and evaporated to dryness. The residue was redissolved in methanol (5 mL) and sodium methoxide (0.194 mmol in 190 μl MeOH) was added. After stirring at r.t. for 16 h the reaction was quenched by addition of acetic acid (22 μL). The mixture was concentrated in vacuo and purified by preparative, reversed-phase HPLC to afford the corresponding antagonists as colorless solids.
(1 R2R3R)-3-Ethenyl-1-O-thphenylmethyl-cvclohexane-1.2-diol (A-Il).
A vinyl lithium solution was generated in situ by treating a solution of tetravinyl tin (409 μL, 2.25 mmol) in THF (3 ml_) with nBuLi (2.5 M in hexane, 3.35 ml_, 8.38 mmol) during 30 min at O0C. CuCN (373 mg, 4.16 mmol) in THF (8 ml.) was treated with the vinyl lithium solution and BF3 etherate (209 μL, 1.66 mmol) in THF (1.5 mL) according to general procedure A. Epoxide A-I (296 mg, 0.830 mmol) in THF (8 mL) was slowly added and the reaction slowly warmed to -3O0C (-78°C: 15 min; -780C to -5O0C: 1.5 h; -50°: 13 h; -5O0C to -300C: 1.5 h; -3O0C: 24 h). Work-up and purification according to general procedure A yielded A-Il (258 mg, 81 %) as a yellowish resin.
[α]D 21 = -33.7 (c = 0.53, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ: 0.84 (m, 1 H, H-5a), 1.15 (m, 1 H, H-4a), 1.32 (m, 1 H, H-6a), 1.43-1.55 (m, 3 H, H-5b, H-6b, H-4b), 1.81 (m, 1 H, H-3), 2.66 (s, 1 H, OH), 2.91 (ddd, 3J = 3.9, 8.6, 11.3 Hz, 1 H, H-1 ), 3.51 (t, 3J = 9.3 Hz, 1 H, H-2), 5.02 (A of ABX, 3JA1X = 10.4 Hz, 2JA,B = 1.7 Hz, 3JA,3 = 0.7 Hz, 1 H, vinyl HA), 5.04 (B of ABX, 3JBlX = 17.2 Hz, 2JA,B = 1 -7 Hz, 3JB,3 = 1.1 Hz, 1 H, vinyl HB), 5.83 (X of ABX, 3JAlX= 10.4 Hz, 3JB,X = 17.2 Hz, 3Jχ,3 = 7.6 Hz, 1 H, vinyl Hx), 7.21-7.31 , 7.48-7.50 (2 m, 15 H, 3 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 23.18 (C-5), 30.39 (C-4), 32.21 (C-6), 47.30 (C-3), 76.74 (C-2), 78.53 (C-1 ), 114.77 (vinyl C), 127.11 , 127.77, 128.75, 145.07 (18 C, 3 C6H5), 140.57 (vinyl C); IR (film on NaCI) v: 3577 (m, OH), 3059 (m), 2932 (vs), 2860 (s), 1641 (vw), 1597 (vw), 1489 (s), 1448 (s), 1278 (m), 1225 (m), 1152 (w), 1064 (vs), 991 (s), 915 (m) cm"1; elemental analysis calcd (%) for C27H28O2 (384.51 ): C 84.34, H 7.34; found: C 84.15, H 7.33.
r(1 f?,2R3f?)-3-Ethenyl-1 -hvdroxy-cvclohex-2-yll 2.3.4-tris-O-benzyl-6-deoxy-α- L-qalactopyranoside (A-IV).
According to general procedure B, A-III (205 mg, 0.428 mmol) in CH2CI2 (1.5 mL) was treated with a solution of Br2 (25.5 μL, 0.496 mmol) in CH2CI2 (1 ml_) for 40 min at O0C. After destroying the excess of bromine, the fucosyl bromide solution was added to a solution of A-Il (126 mg, 0.329 mmol) and Et4NBr (90.8 mg, 0.432 mmol) in DMF/CH2CI2 (6 ml_, 1 :1 ), which has been stirred with activated 3A molecular sieves (500 mg) for 4 h. The reaction was stirred for 67 h at r.t. and then quenched with pyridine (1 mL). Work-up and purification according to general procedure B yielded the tritylether (213 mg). To a stirred solution of the tritylether in CH2CI2 (4 mL), ZnBr2 (179 mg, 0.793 mmol) and triethylsilane (63 μl_, 0.397 mmol) were added. The reaction was quenched after 2 h by adding H2O (100 μl_). Work-up and purification according to general procedure B yielded A-IV (110 mg, 60% over two steps) as a colorless solid.
[α]D 21 = -22.1 (c = 0.52, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ: 1.15 (d, 3JF6,F5 = 6.5 Hz, 3 H, Fuc H-6), 1.17 (m, 1 H, H-4a), 1.26-1.30 (m, 2 H, H-5a, H-6a), 1.72 (m, 1 H, H-5b), 1.78 (m, 1 H, H-4b), 2.02 (m, 1 H, H-6b), 2.13 (m, 1 H, H-3), 3.04 (t, 3J = 9.5 Hz, 1 H, H-2), 3.45 (m, 1 H, H-1 ), 3.69 (m, 1 H, Fuc H-4), 3.98 (dd, 3JF3lF4 = 2.6 Hz, 3JF2)F3 = 10.1 Hz, 1 H, Fuc H-3), 4.10 (dd, 3Jn1F2 = 3.6 Hz, 3JF2,F3 = 10.1 Hz, 1 H, Fuc H-2), 4.12 (m, 1 H, Fuc H-5), 4.65, 4.70, 4.76, 4.78, (4 m, 4 H, 2 CH2Ph), 4.85 (m, 2 H, CH2Ph, vinyl H), 4.98 (m, 1 H, vinyl H), 4.99 (m, 1 H, CH2Ph), 5.03 (d, 3JFi,F2 = 3.6 Hz, 1 H, Fuc H-1 ), 6.25 (m, 1 H, vinyl H), 7.27-7.40 (m, 15 H, 3 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 16.55 (Fuc C-6), 22.81 (C-5), 29.67 (C-4), 32.39 (C-6), 44.33 (C-3), 67.56 (Fuc C-5), 72.97, 73.01 (CH2Ph, C-1 ), 73.38, 74.85 (2 CH2Ph), 76.41 (Fuc C-2), 77.54 (Fuc C-4), 78.86 (Fuc C-3), 90.26 (C-2), 97.98 (Fuc C-1 ), 113.46 (vinyl C), 127.43, 127.48, 127.53, 127.63, 127.82, 128.23, 128.36 (18 C, 3 C6H5), 140.43 (vinyl C), IR (KBr) v: 3429 (s, OH), 3065 (w), 3031 (w), 2932 (s), 2866 (S), 1636 (vw), 1497 (w), 1454 (m), 1348 (m), 1308 (w), 1246 (vw), 1212 (w), 1161 (s), 1138 (s), 1101 (vs), 1064 (vs), 1027 (vs), 953 (m), 911 (w) cnf1 ; elemental analysis calcd (%) for C35H42O6 (558.70): C 75.24, H 7.58; found: C 74.91 , H 7.55. r(1 R.2R.3S)-3-Ethyl-1 -hvdroxy-cvclohex-2-yll 2.3,4-tris-O-benzyl-6-deoxy-α-L- αalactopyranoside (A-V).
A solution of A-IV (90.0 mg, 0.161 mmol) in THF (4 ml_) was added to Pd/C (45.2 mg, 10% Pd) under argon. The mixture was hydrogenated under atmospheric pressure at r.t. After 30 min the reaction was filtered through celite, concentrated under reduced pressure and purified by column chromatography (toluene/petroleum ether/ethyl acetate, 7:7:1 to 5:5:1 ) to yield A-V (69.8 mg, 77%) as a colorless solid.
[α]D 21 = -37.2 (c = 0.50, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ: 0.78 (t, 3J = 7.5 Hz, 3 H, CH2CH3), 0.88 (m, 1 H, H-4a), 1.06-1.26 (m, 3 H1
CH2CH3, H-5a, H-6a), 1.16 (d, 3JF5,F6 = 6.5 Hz, 3 H, Fuc H-6), 1.30 (m, 1 H, H-3), 1.67 (m, 1 H, H-5b), 1.79 (m, 1 H, H-4b), 1.99-2.07 (m, 2 H, H-6b, CH2CH3), 2.96 (dd, 3J = 8.6, 10.2 Hz, 1 H, H-2), 3.38 (ddd, 3J = 4.8, 8.5, 10.6 Hz, 1 H, H-1 ), 3.70 (m, 1 H, Fuc H-4), 3.98 (dd, 3JF3|F4 = 2.7 Hz, 3JF3,F2 = 10.2 Hz, 1 H, Fuc H-5), 4.10-4.14 (m, 2 H, Fuc H-2, Fuc H-5), 4.66, 4.70, 4.77, 4.80, 4.84 (5 m, 5 H, CH2Ph), 4.89-5.00 (m, 2 H, Fuc H-1 , CH2Ph), 7.27-7.40 (m, 15 H, 3 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 10.99 (CH2CH3), 16.60 (Fuc C-6), 23.09 (C-5), 24.17 (CH2CH3), 29.50 (C-4), 32.60 (C-6), 42.64 (C-3), 67.48 (Fuc C-5), 72.83, 73.13, 73.47 (C-1 , 2 CH2Ph), 74.84 (CH2Ph), 76.32 (Fuc C-2), 77.37 (Fuc C-4), 78.86 (Fuc C-3), 91.07 (C-2), 98.31 (Fuc C-1 ), 127.40, 127.46, 127.50, 127.64, 127.80, 128.21 , 128.33, 128.39, 138.31 , 138.39, 138.70 (18 C, 3 C6H5); HR-MS (ESI) mlz: calcd for C35H44NaO6 [M+Na]+: 583.3030; found: 583.3018 (2.1 ppm).
((1 R.2R.3S)-2-r(2.3.4-tris-O-benzyl-6-deoxy-α-L-qalactopyranosvnoxy1-3-ethyl- cvclohex-1-yl) 2.4.6-tri-0-benzoyl-3-0-f(1 S)-1-benzyloxycarbonyl-2-cvclohexyl- ethyli-B-D-qalactopyranoside (A-VII).
According to general procedure C, thioglycoside A-Vl (112 mg, 0.144 mmol) and glycosyl acceptor A-V (61.6 mg, 0.110 mmol) in dry CH2CI2 (4 mL) were added via syringe to activated 3A molecular sieves (1 g). A suspension of DMTST (87.0 mg, 0.337 mmol) and activated 3A molecular sieves (500 mg) in CH2CI2 (2 mL) was prepared in a second flask. Both suspensions were stirred at r.t. for 4 h, then the DMTST suspension was added via syringe to the other suspension with some additional CH2CI2 (1 ml_). The reaction was stopped after 49.5 h and work-up and purification according to general procedure C afforded A-VII (110 mg, 78%) as a colorless foam. [α]D 21 = -51.5 (c = 0.42, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ :
0.45-1.61 (m, 20 H, CyCH2, EtCy), 0.75 (t, 3J = 7.3 Hz, 3 H, CH2CH3), 1.41 (d, 3JF5,F6 = 6.4 Hz, 3 H, Fuc H-6), 1.84 (m, 1 H, H-6b), 1.92 (m, 1 H, CH2CH3), 3.31 (t, 3J = 8.7 Hz, 1 H, H-2), 3.49-3.52 (m, 2 H, H-1 , Fuc H-4), 3.82 (dd, 3JG3,G4 = 3.2 Hz, 3JG2,G3 = 9.8 Hz, 1 H, GaI H-3), 3.92 (m, 1 H, GaI H-5), 3.99-4.05 (m, 2 H, Fuc H-2, Fuc H-3), 4.12 (dd, 3J = 4.6, 7.9 Hz, 1 H, Lac H-2), 4.25 (dd, 3JG5,G6a = 7.2 Hz, 3JG6a,G6b = 11.4 Hz, 1 H, GaI H-6a), 4.28 (m, 1 H, CH2Ph), 4.39 (dd, 3JG5,G6b = 5.7 Hz, 3JG6a,G6b = 11.4 Hz, 1 H, GaI H-6b), 4.51-4.55 (m, 2 H, CH2Ph, GaI H-1 ), 4.63, 4.65, 4.75, 4.78 (4 m, 4 H, CH2Ph), 4.81 (m, 1 H, Fuc H-5), 4.98 (d, 3JF1,F2 = 2.8 Hz, 1 H, Fuc H-1 ), 5.04, 5.11 (2 m, 2 H, CH2Ph), 5.60 (m, 1 H, GaI H-2), 5.84 (m, 1 H, GaI H-4), 7.17-7.33,
7.42-7.46, 7.52-7.58, 8.04-8.12 (4 m, 35 H, 7 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 10.94 (CH2CH3), 16.82 (Fuc C-6), 23.18 (CH2CH3), 22.11 , 25.45, 25.71 , 26.07, 27.89, 30.41 , 32.60, 33.19, 33.40, 40.49 (10 C, EtCy, CyCH2), 44.71 (C-3), 62.50 (GaI C-6), 66.35 (Fuc C-5), 66.64 (CH2Ph), 70.17 (GaI C-4), 71.40 (GaI C-5), 72.07 (CH2Ph), 72.17 (GaI C-2), 74.29, 74.91 (2 CH2Ph),
76.42 (Fuc C-2), 78.06 (GaI C-3), 78.38 (Lac C-2), 79.22, 79.27 (Fuc C-4, C-2), 79.77 (Fuc C-3), 80.95 (C-1), 97.96 (Fuc C-1), 100.05 (GaI C-1 ), 126.94, 127.06, 127.21 , 127.39, 127.77, 128.05, 128.10, 128.38, 128.44, 128.50, 128.54, 129.66, 129.93, 133.03, 133.17, 133.27, 135.40, 138.64, 139.01 , 139.17 (42 C, 7 C6H5), 164.58, 166.11 , 166.22, 172.48 (4 C=O); elemental analysis calcd (%) for C78H86Oi6 (1279.51 ) + 1/2 H2O: C 72.20, H 6.84; found: C 72.37, H 6.82; HR-MS (ESI) m/z: calcd for C78H86NaOi6 [M+Na]+: 1301.5808; found: 1301.5855 (3.6 ppm). ((iff^R.aS^-rfe-deoxy-α-L-qalactopyranosvnoxyi-S-ethyl-cvclohex-i-yl^-O- benzoyl-3-O-r(1 S)-1-carboxy-2-cvclohexyl-ethyll-β-D-qalactopyranoside (A-VIII: Fig. 3).
A-VII (38.2 mg, 29.9 μmol) was hydrogenated with Pd(OH)2/C (50 mg, 10% Pd) in dioxane/H2O (4:1 , 3.75 ml_) according to general procedure D. After 24 h the reaction mixture was filtered through celite and evaporated to dryness. The residue was redissolved in methanol (5 ml_) and sodium methoxide (74.6 μmol in 73 μl MeOH) was added. After stirring at r.t. for 16 h the reaction was quenched by addition of acetic acid (8.5 μl_). The mixture was concentrated in vacuo and purified by preparative, reversed-phase HPLC to afford A-VIII (16.3 mg, 77%) as a colorless solid.
[α]D 21 = -89.3 (c = 0.47, MeOH); 1H-NMR (MeOD, 500.1 MHz) δ: 0.55-1.69 (m, 20 H, CyCH2, EtCy), 0.83 (t, 3J = 7.3 Hz, 3 H, CH2CH3), 1.32 (d, 3J = 6.6 Hz, 3 H, Fuc H-6), 1.90 (m, 1 H, CH2CH3), 1.99 (m, 1 H, H-6b), 3.24 (t, 3J = 8.9 Hz, 1 H, H-2), 3.57 (m, 1 H, GaI H-5), 3.62 (m, 1 H, H-1 ), 3.67 (dd, 3JG3,GA = 3.0 Hz, 3JG2,G3 = 9.8 Hz, 1 H, GaI H-3), 3.70-3.75 (m, 3 H, GaI H-6a, Fuc H-2, Fuc H-4), 3.79 (dd, 3JG5,G6b = 6.9 Hz, 2JG6a,G6b = 11.3 Hz, 1 H, GaI H-6b), 3.86 (dd, 3JF3,F4 = 3.3 Hz, 3JF2,F3 = 10.3 Hz, 1 H, Fuc H-3), 3.97 (m, 1 H, GaI H-4), 4.07 (dd, 3J = 3.0, 9.8 Hz, 1 H, Lac H-2), 4.67 (d, 3JG1,G2 = 8.1 Hz, 1 H, GaI H-1 ), 4.90 (m, 1 H, Fuc H-5), 4.91 (m, 1 H, Fuc H-1 ), 5.43 (dd,
3JGI,G2 = 8.3 Hz, 3JG2,c3 = 9.4 Hz, 1 H, GaI H-2), 7.49-7.52, 7.61-7.64, 8.08-8.09 (3 m, 5 H, C6H5); 13C-NMR (MeOD, 125.8 MHz) δ: 11.12 (CH2CH3), 16.72 (Fuc C-6), 23.39, 24.59, 26.54, 26.72, 27.27, 29.47, 31.86, 33.14, 34.20, 35.06, 42.76 (11 C, EtCy, CH2Cy), 45.96 (C-3), 62.68 (GaI C-6), 67.77 (Fuc C-5), 67.83 (GaI C-4), 70.30 (Fuc C-2), 71.38 (Fuc C-3), 73.12 (GaI C-2), 73.92 (Fuc C-4), 75.90 (GaI C-5), 77.94 (Lac C-2), 80.77 (C-1 ), 81.11 (C-2), 83.55 (GaI C-3), 100.20 (Fuc C-1 ), 100.52 (GaI C-1 ), 129.67, 130.84, 131.63, 134.37 (6 C, C6H5), 166.79 (C=O), 178.76 (CO2H); HR-MS (ESI) m/z: calcd for C36H54NaO14 [M+Na]+: 733.3406; found: 733.3409 (0.4 ppm). EXAMPLE 4
{(1 R,2R,3R)-3-CYCL0PR0PYL-2-[(6-DE0XY-α-L-GALACT0PYRAN0SYL)0XY]- CYCLOHEX-1 -YL} 2-O-BENZOYL-3-O-[(1 S)- 1 -CARBOXY^-CYCLOHEXYL-ETHYLj-β-D-
GALACTOPYRANOSiDE (B-IV; FIG. 4)
(1 R2R.3R)-3-Cvclopropyl-1-O-triphenylmethyl-cvclohexane-1 ,2-diol (B-I).
A cPrLi solution was generated in situ by treating a solution of bromocyclopropane (370 μl_, 4.63 mmol) in THF (4 ml_) with fBuLi (1.7 M in pentane, 5.45 mL, 9.27 mmol) during 80 min at -78°C. CuCN (210 mg, 2.34 mmol) in THF (5 mL) was treated with the cPrLi solution and BF3 etherate (115 μL, 0.914 mmol) in THF (1 mL) according to general procedure A. Epoxide A-I (165 mg, 0.463 mmol) in THF (5 mL) was slowly added and the reaction slowly warmed to -3O0C (-780C: 1.5 h; -780C to -5O0C: 1.5 h; -50°: 24 h; -5O0C to -3O0C: 40 min). Work-up and purification according to general procedure A yielded B-I (150.7 mg, 82%). [α]D 21 = -38.8 (c = 0.50, CH2CI2); 1H-NMR (CD2CI2, 500.1 MHz) δ:
-0.16 (m, 1 H, cPr), 0.13-0.23 (m, 2 H1 cPr), 0.34-0.43 (m, 2 H, cPr, H-3), 0.54-0.67 (m, 2 H, cPr, H-5a), 0.91 (m, 1 H, H-4a), 1.18 (m, 1 H, H-6a), 1.27-1.35 (m, 2 H, H-5b) H-6b), 1.44 (m 1 H, H-4b), 2.52 (s, 1 H, OH), 2.71 (ddd, 3J = 4.1 , 8.6, 11.0 Hz, 1 H, H-1 ), 3.47 (t, 3J = 9.1 Hz, 1 H1 H-2), 7.15-7.23, 7.42-7.43 (2 m, 15 H, 3 C6H5); 13C-NMR (CD2CI2, 125.8 MHz) δ: 0.85, 4.26, 14.56 (3 C, cPr), 23.11 (C-5), 29.50 (C-4), 32.15 (C-6), 46.68 (C-3), 78.55 (C-2), 78.92 (C-1 ), 86.37 (OCPh3), 127.07, 127.73, 128.82, 145.37 (18 C, 3 C6H5); IR (KBr) v: 3571 (m, OH), 3058 (w), 2930 (m), 2858 (m), 1596 (vw), 1490 (m), 1448 (s), 1284 (w), 1225 (w), 1152 (w), 1063 (vs), 926 (w), 844 (vw), 824 (vw), 761 (m), 746 (m), 707 (vs) cm"1; elemental analysis calcd (%) for C28H30O2 (398.54): C 84.38, H 7.59; found: C 84.16, H 7.78. TM R,2R,3/?)-3-Cvclopropyl-1 -hvdroxy-cvclohex-2-yll 2.3.4-tris-O-benzyl-6- deoxy-α-L-qalactopyranoside (B-Il).
According to general procedure B, A-III (223 mg, 0.466 mmol) in CH2CI2 (1.5 ml_) was treated with a solution of Br2 (27.5 μl_, 0.535 mmol) in CH2CI2 (1 ml_) for 30 min at O0C. After destroying the excess of bromine, the fucosyl bromide solution was added to a solution of B-I (142 mg, 0.356 mmol) and Et4NBr (98.9 mg, 0.471 mmol) in DMF/CH2CI2 (6 ml_, 1 :1 ), which has been stirred with activated 3A molecular sieves (1 g) for 4 h. The reaction was stirred for 67 h at r.t. and then quenched with pyridine (1 ml_). Work-up and purification according to general procedure B yielded the tritylether (237 mg). To a stirred solution of the tritylether in CH2CI2 (4 mL), ZnBr2 (193 mg, 0.859 mmol) and triethylsilane (70 μl_, 0.441 mmol) were added. The reaction was quenched after 1.75 h by adding H2O (100 μL). Work-up and purification according to general procedure B yielded B-Il (136 mg, 67% over two steps) as a colorless solid.
[α]D 21 = -29.0 (c = 0.65, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ: -0.06 (m, 1 H1 cPr), 0.08 (m, 1 H, cPr), 0.22 (m, 1 H, cPr), 0.33 (m, 1 H, cPr), 0.87 (m, 1 H, H-4a), 0.96 (m, 1 H, cPr), 1.05-1.27 (m, 6 H, Fuc H-6, H-3, H-5a, H-6a), 1.54 (m, 1 H, H-4b), 1.64 (m, 1 H, H-5b), 1.96 (m, 1 H, H-6b), 3.11 (t, 3J = 9.1 Hz1 1 H, H-2), 3.35 (m, 1 H, H-1 ), 3.69 (m, 1 H, Fuc H-4), 3.98 (dd, 3JF3,F4 = 2.5 Hz, 3JF2,F3 = 10.1 Hz, 1 H, Fuc H-3), 4.11-4.16 (m, 2 H, Fuc H-2, Fuc H-5), 4.66-4.68 (m, 2 H, CH2Ph), 4.76, 4.77, 4.90, 5.01 (4 m, 4 H, CH2Ph), 5.14 (d, 3JF1,F2 = 3.4 Hz, 1 H, Fuc H-1 ), 7.26-7.41 (m, 15 H, 3 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 0.76, 4.93, 13.58 (3 C, cPr), 16.56 (Fuc C-6), 22.86 (C-5), 28.32 (C-4), 32.56 (C-6), 44.14 (C-3), 67.64 (Fuc C-5), 73.14, 73.19 (2 CH2Ph), 73.95 (C-1 ), 74.85 (CH2Ph), 76.74 (Fuc C-2), 77.68 (Fuc C-4), 78.63 (Fuc C-3), 92.33 (C-2), 99.20 (Fuc C-1 ), 127.42, 127.45, 127.50, 127.64, 128.18, 128.22, 128.35, 128.44, 138.44, 138.58, 138.90 (18 C, 3 C6H5); IR (KBr) v: 3426 (s, OH), 3031 (vw), 3004 (vw), 2933 (s), 1497 (vw), 1453 (m), 1348 (w), 1247 (vw), 1212 (vw), 1161 (m), 1136 (s), 1103 (vs), 1064 (vs), 1026 (vs), 957 (w), 911 (vw), 843 (vw), 736 (s), 696 (s) cm"1; elemental analysis calcd (%) for C36H44O6 (572.73): C 75.50, H 7.74; found: C 75.38, H 7.75.
((1 f?.2f?.3R)-2-f(2.3,4-tris-O-benzyl-6-deoxy-α-L-αalactopyranosvnoxyl-3- cvclopropyl-cvclohex-1 -yl) 2,4,6-tri-O-benzoyl-3-Q-r(1 S)-1 -benzyloxycarbonyl-2- cyclohexyl-ethvn-β-D-galactopyranoside (B-III).
According to general procedure C, thioglycoside A-Vl (228 mg, 0.292 mmol) and glycosyl acceptor B-Il (129 mg, 0.225 mmol) in dry CH2CI2 (8 ml_) were added via syringe to activated 3A molecular sieves (2 g). A suspension of DMTST (177 mg, 0.685 mmol) and activated 3A molecular sieves (1 g) in CH2CI2 (4 ml_) was prepared in a second flask. Both suspensions were stirred at r.t. for 4 h, then the DMTST suspension was added via syringe to the other suspension with some additional CH2CI2 (2 ml_). The reaction was stopped after 48 h and work-up and purification according to general procedure C afforded B-III (253 mg, 87%) as a colorless foam. [α]D 21 = -43.1 (c = 0.61 , CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ:
-0.11 (m, 1 H, cPr), 0.16 (m, 1 H, cPr), 0.32-0.35 (m, 2 H, cPr), 0.46-0.53 (m, 2 H, CyCH2), 0.64-1.46 (m, 18 H, CyCH2, Cy, cPr), 1.38 (d, 3JF5|F6 = 6.4 Hz, 3 H, Fuc H-6), 1.80 (m, 1 H, H-6b), 3.52 (t, 3J = 7.3 Hz, 1 H, H-2), 3.57 (s, 1 H, Fuc H-4), 3.62 (m, 1 H, H-1 ), 3.84 (dd, 3JG3,G4 = 2.8 Hz, 3JG2,G3 = 9.8 Hz, 1 H, GaI H-3), 3.93 (m, 1 H, GaI H-5), 4.03 (dd, 3JFI,F2 = 3.2 Hz, 3JF2,F3 = 10.2 Hz, 1 H, Fuc H-2), 4.07 (dd, 3JF3,F4 = 1.7 Hz, 3JF2,F3 = 10.4 Hz, 1 H, Fuc H-3), 4.13 (dd, 3J = 4.5, 7.8 Hz, 1 H, Lac H-2), 4.32-4.40 (m, 3 H, GaI H-6, CH2Ph), 4.53 (m, 1 H, CH2Ph), 4.58 (d, 3JGI, G2 = 8.1 Hz, 1 H, GaI H-1 ), 4.62, 4.68 (2 m, 2 H, CH2Ph), 4.74-4.76 (m, 2 H, Fuc H-5, CH2Ph), 4.78 (m, 1 H, CH2Ph), 5.05, 5.11 (2 m, 2 H, CH2Ph), 5.35 (d, 3JFi,F2 = 2.8 Hz, 1 H, Fuc H-1 ), 5.61 (m, 1 H, GaI H-2), 5.87 (m, 1 H, GaI H-4), 7.20-7.36, 7.42-7.44, 7.52-7.59, 8.03-8.14 (4 m, 35 H, 7 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 3.06 (cPr), 5.26 (cPr), 13.55 (cPr), 16.81 (Fuc C-6), 20.97, 25.46, 25.72, 26.07, 27.71 , 29.44, 32.62, 33.21 , 33.40 (9 C, CyCH2, Cy), 40.46 (Lac C-3), 45.35 (C-3), 62.50 (GaI C-6), 66.34 (Fuc C-5), 66.61 (CH2Ph), 70.10 (GaI C-4), 71.49 (GaI C-5), 72.13 (CH2Ph), 72.32 (GaI C-2), 74.22 (CH2Ph), 74.87 (CH2Ph), 76.15 (Fuc C-2), 77.97 (GaI C-3), 78.38 (Lac C-2), 78.82 (C-2), 79.13 (Fuc C-4), 79.66 (C-1 ), 79.83 (Fuc C-3), 97.02 (Fuc C-1 ), 99.60 (GaI C-1 ), 126.96, 127.05, 127.20, 127.38, 127.78, 128.05, 128.09, 128.37, 128.43, 128.47, 128.53, 129.61 , 129.73, 129.89, 129.93, 129.96, 133.03, 133.16, 133.23, 135.44, 138.51 , 138.95, 139.21 (42 C, 7 C6H5), 164.57, 165.98, 166.16, 172.43 (4 C=O); IR (KBr) v: 3064 (vw), 3032 (vw), 2927 (s), 2854 (w), 1731 (vs, C=O), 1602 (vw), 1497 (vw), 1452 (m), 1315 (m), 1267 (vs), 1176 (s), 1097 (vs), 1027 (vs), 840 (vw), 713 (vs) cm-1; elemental analysis calcd (%) for CrgHβeOie (1291.52): C 73.47, H 6.71 ; found: C 73.32, H 6.81.
((1 R.2/?.3R)-3-cvclopropyl-2-r(6-deoxy-α-L-αalactopyranosyl)oxyl-cvclohex-1-yl) 2-O-benzoyl-3-O-r(1 S)- 1 -carboxy-2-cvclohexyl-ethyll-β-D-αalactopyranoside (B- IV: Fig. 4).
B-III (100 mg, 77.7 μmol) was hydrogenated with Pd(OH)2/C (52 mg, 10% Pd) in dioxane/H2O (4:1 , 3.75 ml.) according to general procedure D. After 24 h the mixture was filtered through celite and hydrogenated with fresh Pd(OH)2/C (50 mg) for another 48 h. The reaction mixture was filtered through celite and evaporated to dryness. The residue was redissolved in methanol (5 ml.) and sodium methoxide (194 μmol in 190 μl MeOH) was added. After stirring at r.t. for 16 h the reaction was quenched by addition of acetic acid (22 μL). The mixture was concentrated in vacuo and purified by preparative, reversed-phase HPLC to afford B-IV (40.5 mg, 72%) as a colorless solid.
[α]D 21 = -85.4 (c = 0.75, MeOH); 1H-NMR (MeOD, 500.1 MHz) δ: -0.04 (m, 1 H, cPr), 0.33 (m, 1 H, cPr), 0.45-0.52 (m, 2 H, cPr), 0.56-1.65 (m, 20 H1 CyCH2, cPrCy), 1.30 (d, 3JF5,F6 = 6.6 Hz, 3 H, Fuc H-6), 1.94 (m, 1 H,
H-6b), 3.45 (t, 3J = 8.5 Hz, 1 H, H-2), 3.56 (m, 1 H, GaI H-5), 3.62 (m, 1 H, H-1), 3.66 (dd, 3JG3,G4 = 3.1 Hz, 3JG2,G3 = 9.8 Hz, 1 H, GaI H-3), 3.71-3.74 (m, 2 H, GaI H-6a, Fuc H-2), 3.78 (m, 1 H, Fuc H-4), 3.83 (dd, 3JG5,G6b = 7.1 Hz, 2^G6a,G6b = 11.4 Hz, 1 H, GaI H-6b), 3.95 (dd, 3JF3^ = 3.3 Hz, 3JF2,F3 = 10.2 Hz, 1 H, Fuc H-3), 3.97 (m, 1 H, GaI H-4), 4.06 (dd, 3J = 2.9, 9.8 Hz, 1 H, Lac H-2), 4.66 (d, 3JG1,G2 = 8.0 Hz, 1 H, GaI H-1 ), 4.88 (m, 1 H1 Fuc H-5), 5.37 (d, 3JF1,F2 = 3.9 Hz, 1 H, Fuc H-1 ), 5.39 (dd, 3JGI,G2 = 8.1 Hz, 3JG2,G3 = 9.6 Hz, 1 H, GaI H-2), 7.49-7.52, 7.61-7.65, 8.07-8.09 (3 m, 5 H, C6H5); 13C-NMR (MeOD, 125.8 MHz) δ: 3.96, 7.18, 15.53 (3 C, cPr), 16.72 (Fuc C-6), 22.94, 26.54, 26.73, 27.27, 30.78, 31.45 (6 C, CyCH2, Cy), 33.13, 34.20, 35.07, 42.76 (4 C, CyCH2), 48.49 (C-3), 62.72 (GaI C-6), 67.61 (Fuc C-5), 67.88 (GaI C-4), 70.24 (Fuc C-2), 71.34 (Fuc C-3), 73.16 (GaI C-2), 73.97 (Fuc C-4), 76.02 (GaI C-5), 78.01 (Lac C-2), 80.29 (C-1 ), 80.52 (C-2), 83.45 (GaI C-3), 98.97 (Fuc C-1 ), 100.41 (GaI C-1 ), 129.66, 130.82, 131.63, 134.36 (6 C, C6H5), 166.76 (C=O), 178.83 (CO2H); HR-MS (ESI) mlz: calcd for C37H54NaOi4 [M+Na]+: 745.3406; found: 745.3407 (0.1 ppm).
EXAMPLE 5
{(1 /?,2/?,3S)-3-BUTYL-2-[(6-DE0XY-α-L-GALACT0PYRAN0SYL)0XY]-CYCL0HEX-1-YL} 2-O-BENZOYL-3-O-[(1 S)-1 -CARBOXY-2-CYCLOHEXYL-ETHYL]-β-D- GALACTOPYRANOSiDE SODIUM SALT (C-IV; FIG. 5)
(I R^R.SSVS-Butyl-i-O-thphenylmethyl-cvclohexane-i ^-diol (C-I).
CuCN (342 mg, 3.81 mmol) in THF (10 mL) was treated with nBuLi (2.5 M in hexane, 3.05 mL, 7.63 mmol) and BF3 etherate (192 μL, 1.53 mmol) in THF (2 mL) according to general procedure A. Epoxide A-I (271 mg, 0.761 mmol) in THF (8 mL) was slowly added and the reaction slowly warmed to -3O0C (-780C: 1 h; -780C to -50°C: 4 h; -50°: 24 h; -50°C to -30°C: 21 h). Work-up and purification according to general procedure A yielded C-I (220 mg, 70%).
[α]D 21 = -37.8 (c = 0.66, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ: 0.73 (m, 1 H, H-5a), 0.85 (m, 1 H, H-4a), 0.86 (t, 3J = 7.2 Hz, 3 H, H-10),
1.03-1.16 (m, 3 H, H-3, H-7a, H-8a), 1.21-1.35 (m, 4 H, H-6a, H-8b, H-9a, H-9b), 1.38-1.49 (m, 2 H, H-5b, H-6b), 1.61 (m, 1 H, H-4b), 1.75 (m, 1 H, H-7b), 2.70 (s, 1 H, OH), 2.82 (ddd, 3J = 4.0, 8.6, 11.2 Hz, 1 H, H-1 ), 3.40 (t, 3J = 9.0 Hz, 1 H, H-2), 7.21-7.30, 7.48-7.50 (2 m, 15 H, 3 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 14.11 (C-10), 23.10 (C-9), 23.37 (C-5), 28.73 (C-8), 29.38 (C-4), 32.05 (C-7), 32.30 (C-6), 42.45 (C-3), 77.62 (C-2), 79.05 (C-1 ), 86.43 (CPh3), 127.05, 127.74, 128.70, 145.12 (18 C, 3 C6H5); elemental analysis calcd (%) for C29H34O2 (414.58): C 84.02, H 8.27; found: C 84.05, H 8.27.
Fd R2R3S)-3-Butyl-1 -hvdroxy-cvclohex-2-yll 2.3.4-tris-O-benzyl-6-deoxy-α-L- galactopyranoside (C-Il).
According to general procedure B, A-III (308 mg, 0.644 mmol) in CH2CI2 (3 ml_) was treated with a solution of Br2 (38 μl_, 0.740 mmol) in CH2CI2 (1 ml_) for 30 min at O0C. After destroying the excess of bromine, the fucosyl bromide solution was added to a solution of C-I (205 mg, 0.495 mmol) and Et4NBr (137 mg, 0.650 mmol) in DMF/CH2CI2 (10 ml_, 1 :1 ), which has been stirred with activated 3A molecular sieves (700 mg) for 3.5 h. The reaction was stirred for 67 h at r.t. and then quenched with pyridine (1 ml_). Work-up and purification according to the general procedure B yielded the tritylether (283 mg) as a yellowish resin. To a stirred solution of the tritylether in CH2CI2 (4 ml_), ZnBr2 (229 mg, 1.02 mmol) and triethylsilane (81 μL, 0.510 mmol) were added. The reaction was quenched after 1.25 h by adding H2O (100 μL). Work-up and purification according to general procedure B yielded C-Il (161 mg, 55% over two steps) as a colorless solid. [α]D 21 = -21.3 (c = 0.56, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ:
0.82 (t, 3J = 7.0 Hz, 3 H, H-10), 0.86 (m, 1 H, H-4a), 0.98 (m, 1 H, H-7a), 1.15 (d, 3JF5,F6 = 6.5 Hz, 3 H, Fuc H-6), 1.09-1.37 (m, 7 H, H-3, H-5a, H-6a, H-8a, H-8b, H-9a, H-9b), 1.66 (m, 1 H, H-5b), 1.81 (m, 1 H, H-4b), 1.98 (m, 1 H, H-6b), 2.10 (m, 1 H, H-7b), 2.94 (t, 3J = 9.3 Hz, 1 H, H-2), 3.36 (m, 1 H, H-1 ), 3.68 (m, 1 H, Fuc H-4), 3.98 (dd, 3v/F3,F4 = 2.6 Hz, 3JF2,F3 = 10.2 Hz, 1 H, Fuc H-3), 4.09-4.14 (m, 2 H, Fuc H-2, Fuc H-5), 4.65, 4.70, 4.75, 4.78, 4.85 (5 m, 5 H, 3 CH2Ph), 4.98-5.00 (m, 2 H, Fuc H-1 , 1 CH2Ph), 7.25-7.39 (m, 15 H, 3 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 14.11 (C-10), 16.57 (Fuc C-6), 22.72 (C-9), 23.19 (C-5), 29.03 (C-8), 30.26 (C-4), 31.24 (C-7), 32.55 (C-6), 41.18 (C-3), 67.54 (Fuc C-5), 72.97 (CH2Ph), 73.26 (C-1 ), 73.39 (CH2Ph), 74.84 (CH2Ph), 76.38 (Fuc C-2), 77.60 (Fuc C-4), 78.80 (Fuc C-3), 91.47 (C-2), 98.31 (Fuc C-1 ), 127.40, 127.45, 127.52, 127.61 , 127.86, 128.20, 128.21 , 128.33, 128.38, 138.32, 138.44, 138.79 (18 C, 3 C6H5); elemental analysis calcd (%) for C37H48O6 (588.77): C 75.48, H 8.22; found: C 75.55, H 8.28.
((1R2/?.3S)-2-f(2,3.4-tris-O-benzyl-6-deoxy-α-L-αalactopyranosvnoxyl-3-butyl- cvclohex-1 -yl) 2,4.6-tri-O-benzoyl-3-O-r(1 S)-1 -benzyloxycarbonyl^-cvclohexyl- ethyll-β-D-qalactopyranoside (C-III).
According to general procedure C, thioglycoside A-Vl (218 mg, 0.279 mmol) and glycosyl acceptor C-Il (126 mg, 0.215 mmol) in dry CH2CI2 (8 ml_) were added via syringe to activated 3A molecular sieves (2 g). A suspension of DMTST (166 mg, 0.644 mmol) and activated 3A molecular sieves (1 g) in CH2CI2 (4 ml_) was prepared in a second flask. Both suspensions were stirred at r.t. for 4.5 h, then the DMTST suspension was added via syringe to the other suspension with some additional CH2CI2 (2 ml_). The reaction was stopped after 65.5 h and work-up and purification according to general procedure C afforded C-III (224 mg, 80%) as a colorless foam.
[α]D 21 = -46.7 (c = 0.49, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ: 0.45-1.84 (m, 26 H, CyCH2, nBuCy), 0.80 (d, 3J= 6.8 Hz, 3 H, nBu), 1.40 (d, 3J= 6.5 Hz, 3 H, Fuc H-6), 3.36 (t, 3J = 8.5 Hz, 1 H, H-2), 3.52 (s, 1 H, Fuc H-4), 3.54 (m, 1 H, H-1 ), 3.83 (dd, 3JG3|G4 = 3.0 Hz, 3JG2,G3 = 9.8 Hz, 1 H, GaI H-3), 3.92 (m, 1 H, GaI H-5), 4.01 (dd, 3JF1,F2 = 3.2 Hz, 3JF2,F3 = 10.3 Hz, 1 H, Fuc H-2), 4.04 (dd, 3JF3,F4 = 2.0 Hz, 3JF2,F3 = 10.4 Hz, 1 H, Fuc H-3), 4.13 (dd, 3J = 4.6, 7.8 Hz, 1 H, Lac H-2), 4.28 (dd, 3JG5,G6a = 6.7 Hz, 2JG6a,G6b = 11.4 Hz, 1 H, GaI H-6a), 4.28 (m, 1 H, CH2Ph), 4.39 (dd, 3JG5,G6b = 5.8 Hz, 2JG6a,G6b = 11.4 Hz, 1 H, GaI H-6b), 4.52 (m, 1 H, CH2Ph), 4.56 (d, 3JGi,G2 = 8.1 Hz, 1 H, GaI H-1 ), 4.65, 4.68, 4.74, 4.76 (4 m, 4 H, CH2Ph), 4.79 (m, 1 H, Fuc H-5), 5.01 (d, 3JF1|F2 = 3.0 Hz, 1 H, Fuc H-1 ), 5.05, 5.11 (2 m, 2 H, CH2Ph), 5.61 (m, 1 H, GaI H-2), 5.85 (m, 1 H, GaI H-4), 7.20-7.36, 7.42-7.46, 7.52-7.59, 8.04-8.13 (4 m, 35 H, 7 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 14.26 (CH2CH2CH2CH3), 16.81 (Fuc C-6), 21.84, 22.95, 25.46, 25.71 , 26.07, 28.34, 28.55, 30.20, 30.39, 32.61 , 33.19, 33.39, 40.48, 42.80 (14 C, CyCH2, nBuCy), 62.52 (GaI C-6), 66.37 (Fuc C-5), 66.63 (CH2Ph), 70.15 (GaI C-4), 71.45 (GaI C-5), 72.11 (CH2Ph), 72.21 (GaI C-2), 73.89, 74.92 (2 CH2Ph), 76.17 (Fuc C-2), 78.05 (GaI C-3), 78.38 (Lac C-2), 78.76 (C-2), 79.23 (Fuc C-4), 79.75 (Fuc C-3), 80.79 (C-1 ), 97.71 (Fuc C-1 ), 100.03 (GaI C-1 ), 126.95, 127.04, 127.21 , 127.30, 127.80, 128.04, 128.09, 128.15, 128.39, 128.44, 128.48, 128.49, 128.54, 129.66, 129.71 , 129.75, 129.92, 129.94, 133.03, 133.16, 133.25, 135.42, 138.70, 138.99, 139.16 (42 C, 7 C6H5), 164.56, 166.09, 166.21 , 172.47 (4 C=O); elemental analysis calcd (%) for C80H90Oi6 (1307.58): C 73.49, H 6.94; found: C 73.16, H 6.93.
(H R2R3S)-3-butyl-2-r(6-deoxy-α-L-qalactopyranosvnoxyl-cvclohex-1 -yl> 2-O- benzoyl-3-O-f(1 S)-1-carboxy-2-cvclohexyl-ethyl1-β-D-galactopyranoside sodium salt (C-IV: Fig. 5).
C-III (100 mg, 76.5 μmol) was hydrogenated with Pd(OH)2/C (50 mg, 10% Pd) in dioxane/H2O (4:1 , 3.75 ml_) according to general procedure D. After 19 h the mixture was filtered through celite and hydrogenated with fresh Pd(OH)2/C (50 mg) for another 30 h. The reaction mixture was filtered through celite and evaporated to dryness. The residue was redissolved in methanol (5 mL) and sodium methoxide (0.191 mmol) was added. After stirring at r.t. for 17 h the reaction was quenched by addition of acetic acid (22 μl_). The mixture was concentrated in vacuo and purified by column chromatography (CH2CI2/methanol/water, 3.4:1 :0.1 to 2:1 :0.1 ), followed by Dowex 50 (Na+ form) ion exchange column, Sephadex G15 column, microfiltration and lyophilization from dioxane to give C-IV (32.3 mg, 56%) as a colorless foam. For biological testing a small amount was purified by preparative, reversed-phase HPLC to afford the free acid of C-IV as colorless needles.
C-IV sodium salt: [α]D 21 = -77.9 (c = 0.61 , MeOH); 1H-NMR (MeOD, 500.1 MHz) δ : 0.47-1.89 (m, 25 H, CyCH2, πBu, Cy), 0.88 (t, 3J = 7.1 Hz, 3 H, πBu), 1.31 (d, 3J = 6.5 Hz, 3 H, Fuc H-6), 2.00 (m, 1 H, H-6b), 3.24 (t, 3J = 8.9 Hz, 1 H, H-2), 3.56-3.60 (m, 2 H, GaI H-5, GaI H-3), 3.65 (m, 1 H, H-1 ), 3.72-3.77 (m, 4 H, GaI H-6a, Fuc H-2, Fuc H-4, Lac H-2), 3.80 (del, 3JG5,G6b = 6.9 Hz, 2JG6a,G6b = 11.5 Hz1 1 H, GaI H-6b), 3.88 (dd, 3JF3|F4 = 3.3 Hz, 3JF2,F3 = 10.3 Hz, 1 H, Fuc H-3), 3.95 (m, 1 H, GaI H-4), 4.68 (d, 3JGI,G2 = 8.1 Hz, 1 H, GaI H-1 ), 4.85 (m, 1 H, Fuc H-5), 4.94 (d, 3JF1,F2 = 4.0 Hz, 1 H, Fuc H-1 ), 5.41 (dd, 3JGI,G2 = 8.5 Hz, 3JG2,G3 = 9-2 Hz, 1 H, GaI H-2), 7.48-7.51 , 7.60-7.63, 8.07-8.09 (3 m, 5 H, C6H5); 13C-NMR (MeOD, 125.8 MHz) δ: 14.48 (nBu), 16.72 (Fuc C-6), 23.27, 23.92, 26.57, 26.82, 27.41 , 29.83, 30.04, 31.69, 31.86, 33.06, 34.44, 35.41 , 43.54, 44.30 (14 C, nBu, Cy, CH2Cy), 63.06 (GaI C-6), 67.70 (GaI C-4), 67.84 (Fuc C-5), 70.21 (Fuc C-2), 71.34 (Fuc C-3), 73.08 (GaI C-2), 73.90 (Fuc C-4), 75.92 (GaI C-5), 80.69 (Lac C-2), 80.41 (C-1 ), 81.37 (C-2), 83.69 (GaI C-3), 99.91 (Fuc C-1 ), 100.53 (GaI C-1 ), 129.60, 130.84, 131.76, 134.23 (6 C, C6H5), 166.87 (C=O), 183.26 (COOH); HR-MS (ESI) mlz: caled for C38H58NaOi4 [M+H]+: 761.3719; found: 761.3710 (1.2 ppm).
C-IV free acid: 1H-NMR (MeOD, 500.1 MHz) δ: 0.54-1.91 (m, 25 H, CyCH2, nBu, Cy), 0.89 (t, 3J = 7.1 Hz, 3 H, nBu), 1.32 (d, 3J = 6.6 Hz, 3 H, Fuc H-6), 1.98 (m, 1 H, H-6b), 3.23 (t, 3J = 8.9 Hz, 1 H, H-2), 3.56 (m, 1 H, GaI H-5), 3.62 (m, 1 H, H-1 ), 3.66 (dd, 3JG3,G4 = 3.0 Hz, 3JG2,G3 = 9.8 Hz, 1 H, GaI H-3), 3.70-3.75 (m, 3 H, GaI H-6a, Fuc H-2, Fuc H-4), 3.79 (dd, 3JG6b,G5 = 6.9 Hz, 2JG6a,G6b = 11.3 Hz, 1 H, GaI H-6b), 3.85 (dd, 3JF3,F4 = 3.3 Hz, 3JF2,F3 = 10.3 Hz, 1 H, Fuc H-3), 3.97 (m, 1 H, GaI H-4), 4.06 (dd, 3J = 2.9, 9.9 Hz, 1 H, Lac H-2), 4.67 (d, 3JGI,G2 = 8.1 Hz, 1 H, GaI H-1 ), 4.88-4.92 (m, 2 H, Fuc H-1 , Fuc H-5), 5.43 (dd, 3JGI,G2 = 8.2 HZ, 3JG2,G3 = 9.6 HZ, 1 H, GaI H-2), 7.49-7.52, 7.62-7.64, 8.07-8.09 (3 m, 5 H, C6H5); 13C-NMR (MeOD, 125.8 MHz) δ: 14.48 (nBu), 16.74 (Fuc C-6), 23.38, 23.90, 26.54, 26.72, 27.28, 29.83, 29.99, 31.71 , 31.81 , 33.12, 34.19, 35.07, 42.78, 44.51 (14 C, nBu, Cy, CH2Cy), 62.69 (GaI C-6), 67.79 (2 C, Fuc C-5, GaI C-4), 70.27 (Fuc C-2), 71.43 (Fuc C-3), 73.10 (GaI C-2), 73.94 (Fuc C-4), 75.90 (GaI C-5), 77.93 (Lac C-2), 80.71 (C-1 ), 81.45 (C-2), 83.57 (GaI C-3), 100.29 (Fuc C-1 ), 100.52 (GaI C-1 ), 129.67, 130.85, 131.63, 134.37 (6 C, C6H5), 166.77 (C=O), 178.84 (CO2H). EXAMPLE 6
{(1 /?,2/?,3f?)-2-[(6-DEOXY-a-L-GALACTOPYRANOSYL)OXY]-3-(2-METHOXYCARBONYL-
ETHYL)-CYCLOHEX-1 -YL} 2-O-BENZOYL-3-O-[(1 S)-I -CARBOXY^-CYCLOHEXYL-
ETH YLl-β-D-GALACTOPYRANOSI DE (D-III; FlG. 6)
r(1R2f?.3f?)-1-Hvdroxy-3-(2-methoxycarbonyl-ethyl)-cvclohex-2-yll 2.3.4-tris-O- benzyl-6-deoxy-α-L-qalactopyranoside (D-I).
A-IV (106 mg, 0.189 mmol) was dissolved in CH2CI2 (5 mL) and Grubbs cat. 2nd gen. (16.0 mg 18.8 μmol) and methyl acrylate (171 μl_, 1.90 mmol) were added. The reaction was heated under reflux for 9 d. After 1 d, 2 d and 7 d additional Grubbs cat. 2nd gen. (each 16.0 mg, 18.8 μmol) and methyl acrylate (each 171 μl_, 1.90 mmol) were added. The mixture was concentrated under reduced pressure and purified by column chromatography (petroleum ether/ethyl acetate, 5:1 to 4:1 ) to yield an E/Z mixture (53.9 mg), which was directly used for hydrogenation. A solution of the E/Z-mixture in THF (4 mL) was added to Pd/C (28.0 mg, 10% Pd) under argon. The mixture was hydrogenated under atmospheric pressure at r.t. After 30 min the reaction was filtered through celite, concentrated under reduced pressure and purified by column chromatography (petroleum ether/ethyl acetate, 3:1 to 2:1 ) to yield D-I (29.1 mg, 25%) as a brownish oil. [α]D 21 = -21.2 (c = 1.46, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ:
0.94 (m, 1 H), 1.14 (d, 3JF6,F5 = 6.5 Hz, 3 H, Fuc H-6), 1.19-1.28 (m, 2 H), 1.35-1.47 (m, 2 H), 1.67 (m, 1 H), 1.74 (m, 1 H), 1.99 (m, 1 H), 2.29-2.36 (m, 3 H), 2.97 (t, 3J = 9.2 Hz, 1 H, H-2), 3.36 (m, 1 H, H-1 ), 3.57 (s, 3 H, Me), 3.67 (m, 1 H, Fuc H-4), 3.98 (dd, 3JF3,F4 = 2.4 Hz, 3v/F2,F3 = 10.2 Hz, 1 H, Fuc H-3), 4.09-4.13 (m, 2 H, Fuc H-2, Fuc H-5), 4.65, 4.71 , 4.76, 4.78, 4.85 (5 m, 5 H, CH2Ph), 4.96 (d, 3JFI ,F2 = 3.4 Hz, 1 H, Fuc H-1 ), 4.99 (1 m, 1 H, CH2Ph), 7.25-7.41 (m, 15 H, 3 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 16.50 (Fuc C-6), 23.03, 27.48, 30.37, 32.02, 32.33 (5 C), 40.72 (C-3), 51.30 (Me), 67.64 (Fuc C-5), 72.97, 73.00 (CH2Ph, C-1 ), 73.48, 74.82 (2 CH2Ph), 76.01 (Fuc C-2), 77.50 (Fuc C-4), 78.84 (Fuc C-3), 91.25 (C-2), 98.33 (Fuc C-1 ), 127.43, 127.47, 127.58, 127.62, 127.92, 128.19, 128.28, 128.34, 128.36, 138.23, 138.36, 138.73 (18 C1 3 C6H5), 174.33 (COOMe); HR-MS (ESI) mlz: calcd for C37H46NaO8 [M+Na]+: 641.3085; found: 641.3080 (0.8 ppm).
((1/?.2R.3/?)-2-r(2.3.4-ths-O-benzyl-6-deoxy-α-L-qalactopyranosvπoxy1-3-(2- methoxycarbonyl-ethvO-cvclohex-i -yl) 2,4,6-th-O-benzoyl-3-O-r(1 S)- 1 - benzyloxycarbonyl-2-cvclohexyl-ethyll-β-D-qalactopyranoside (D-Il)
According to general procedure C, thioglycoside A-Vl (47.9 mg, 61.3 μmol) and glycosyl acceptor D-I (29.1 mg, 47.0 μmol) in dry CH2CI2 (4 ml_) were added via syringe to activated 3A molecular sieves (500 mg). A suspension of DMTST (37.6 mg, 146 μmol) and activated 3A molecular sieves (250 mg) in CH2CI2 (2 ml_) was prepared in a second flask. Both suspensions were stirred at r.t. for 4 h, then the DMTST suspension was added via syringe to the other suspension with some additional CH2CI2 (1 mL). The reaction was stopped after 65.5 h and work-up according to general procedure C and purification by column chromatography (petroleum ether/ethyl acetate, 4:1 to 3:1 ) afforded D-Il (49.5 mg, 79%) as a colorless foam.
[α]D 21 = -38.1 (c = 0.59, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ : 0.45-1.57 (m, 19 H, CyCH2, Cy), 1.37 (d, 3J = 6.4 Hz, 3 H, Fuc H-6), 1.61 (m, 1 H, (CH2)2CO2Me), 1.82 (m, 1 H, H-6b), 2.13-2.26 (m, 3 H, (CH2)2CO2Me), 3.39 (t, ZJ = 8.1 Hz, 1 H, H-2), 3.51 (s, 1 H, Fuc H-4), 3.53-3.56 (m, 4 H, H-1 , Me), 3.84 (dd, 3JG3,G4 = 3.3 Hz, 3JG2,G3 = 9.9 Hz, 1 H, GaI H-3), 3.93 (m, 1 H, GaI H-5), 3.98-4.03 (m, 2 H, Fuc H-2, Fuc H-3), 4.13 (dd, 3J = 4.5, 8.0 Hz, 1 H, Lac H-2), 4.28 (dd, 3JG5,G6a = 7.2 Hz, 2JG6a,G6b = 11.4 Hz, 1 H, GaI H-6a), 4.31 (m, 1 H, CH2Ph), 4.38 (dd, 3JG5,G6b = 5.6 Hz, 2JG6a,G6b = 11.4 Hz, 1 H, GaI H-6b), 4.54 (m, 1 H, CH2Ph), 4.55 (d, 3JG1,G2 = 8.0 Hz, 1 H, GaI H-1 ), 4.66-4.71 (m, 3 H, CH2Ph, Fuc H-5), 4.73, 4.77 (2 m, 2 H, CH2Ph), 5.02 (d, 3JF1,F2 = 2.3 Hz, 1 H, Fuc H-1 ), 5.05, 5.12 (2 m, 2 H, CH2Ph), 5.60 (m, 1 H, GaI H-2), 5.85 (m, 1 H, GaI H-4), 7.19-7.34, 7.42-7.47, 7.53-7.59, 8.03-8.13 (4 m, 35 H, 7 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 16.78 (Fuc C-6), 21.18, 25.44, 25.66, 25.70, 26.05, 27.84, 31.26, 32.57, 33.19, 33.38, 40.45 (12 C, CyCH2, Cy, (CHa)2CO2Me), 41.94 (C-3), 51.42 (CO2Me), 62.54 (GaI C-6), 66.50 (Fuc C-5), 66.62 (CH2Ph), 70.09 (GaI C-4), 71.48 (GaI C-5), 72.24 (2 C, CH2Ph, GaI C-2), 73.79, 74.90 (2 CH2Ph), 76.26 (Fuc C-2), 77.91 (GaI C-3), 78.34, 78.38 (Lac C-2, C-2), 79.09 (Fuc C-4), 79.53 (Fuc C-3), 80.22 (C-1 ), 97.70 (Fuc C-1 ) 99.93 (GaI C-1 ), 126.96, 127.06, 127.23, 127.29, 127.83, 128.04, 128.06, 128.08, 128.15, 128.38, 128.44, 128.48, 128.53, 128.57, 129.62, 129.65, 129.69, 129.74, 129.86, 129.88, 129.94, 129.99, 133.05, 133.19, 133.24, 135.39, 138.64, 138.99, 139.07 (42 C, 7 C6H5), 164.55, 166.06, 166.17, 172.45, 174.02 (5 C=O); elemental analysis calcd (%) for C8oH88θi8 (1337.54): C 71.84, H 6.63; found: C 71.70, H 6.73.
((1 R.2R.3R)-2-f(6-deoxy-α-L-qalactopyranosyl)oxyl-3-(2-methoxycarbonyl- ethvπ-cvclohex-1-yl) 2-O-benzoyl-3-O-r(1 S)-1-carboxy-2-cvclohexyl-ethyll-β-D- αalactopyranoside (D-III; Fig. 6).
D-III (46.0 mg, 34.4 μmol) was hydrogenated with Pd(OH)2/C (25 mg, 10% Pd) in dioxane/H2O (4:1 , 3.75 ml_) according to general procedure D. After 42 h the mixture was filtered through celite and hydrogenated with fresh Pd(OH)2/C (27 mg) for additional 24 h. The reaction mixture was filtered through celite and evaporated to dryness. The residue was redissolved in methanol (3 ml_) and sodium methoxide (51.6 μmol in 55 μl MeOH) was added. After stirring at r.t. for 16 h the reaction was quenched by addition of acetic acid (6 μl_). The mixture was concentrated in vacuo and purified by preparative, reversed-phase HPLC to afford D-III (19.2 mg, 73%) as a colorless solid.
[α]D 21 = -78.3 (c = 0.63, MeOH); 1H-NMR (MeOD, 500.1 MHz) δ: 0.55-0.75 (m, 4 H, CyCH2), 0.84-0.96 (m, 2 H, CyCH2, H-4a), 1.04 (m, 1 H, H-6a), 1.14 (m, 1 H, H-5a), 1.21-1.36 (m, 5 H, CyCH2), 1.32 (d, 3J = 6.6 Hz, 3 H, Fuc H-6), 1.39-1.60 (m, 6 H, CyCH2, H-3, H-5b, (CW2)2CO2Me), 1.66 (m, 1 H, H-4b), 1.97 (m, 1 H, H-6b), 2.18-2.38 (m, 3 H, CyCH2, (CH2)2CO2Me), 3.27 (t, 3J = 8.4 Hz, 1 H, H-2), 3.57 (m, 1 H, GaI H-5), 3.63-3.68 (m, 5 H, CH3, GaI H-3, H-1 ), 3.71-3.75 (m, 3 H, GaI H-6a, Fuc H-2, Fuc H-4), 3.79 (dd, 3JG5,G6b = 6.8 Hz, 2JG6a,G6b = 11.3 Hz, 1 H, GaI H-6b), 3.84 (dd, 3JF3,F4 = 3.3 Hz, 3JF2,F3 = 10.2 Hz, 1 H1 Fuc H-3), 3.98 (m, 1 H, GaI H-4), 4.07 (dd, 3J = 3.0, 9.9 Hz, 1 H1 Lac H-2), 4.67 (d, 3JGI,G2 = 8.1 Hz, 1 H, GaI H-1 ), 4.83 (m, 1 H, Fuc H-5), 4.92 (m, 1 H, Fuc H-1 ), 5.43 (dd, 3JG1,G2 = 8.2 Hz, 3JG21G3 = 9.6 Hz, 1 H, GaI H-2), 7.49-7.52, 7.62-7.65, 8.08-8.09 (3 m, 5 H, C6H5); 13C-NMR (MeOD, 125.8 MHz) δ: 16.73 (Fuc C-6), 22.77 (C-5), 26.55, 26.73, 27.28, 27.34 (4 C, CyCH2), 29.49 (C-4), 31.34 (C-6), 32.16 ((CHz)2CO2Me), 33.13, 34.20, 35.07 (3 C, CyCH2), 42.78 ((CHz)2CO2Me), 43.52 (C-3), 52.03 (Me), 62.62 (GaI C-6), 67.81 (GaI C-4), 67.89 (Fuc C-5), 70.25 (Fuc C-2), 71.41 (Fuc C-3), 73.09 (GaI C-2), 73.90 (Fuc C-4), 75.92 (GaI C-5), 77.98 (Lac C-2), 80.36 (C-1 ), 80.96 (C-2), 83.50 (GaI C-3), 100.34 (Fuc C-1 ), 100.50 (GaI C-1 ), 129.68, 130.85, 131.62, 134.39 (6 C, C6H5), 166.77, 176.09, 178.86 (3 C=O); elemental analysis calcd (%) for C38H56Oi6 (768.84) + 1 1/2 H2O: C 57.35, H 7.47; found: C 57.57, H 7.36; HR-MS (ESI) miz: calcd for C38H56NaOi6 [M+Na]+: 791.3461 ; found: 791.3463 (0.3 ppm).
EXAMPLE 7
{(1 /?,2/?,5/;?)-5-7£f?r-BUTYL-2-[(6-DEOXY-a-L-GALACTOPYRANOSYL)OXY]-CYCLOHEX- 1 -YL} 2-O-BENZOYL-3-O-[(1 S)-I -CARBOXY^-CYCLOHEXYL-ETHYL]-P-D-
GALACTOPYRANOSiDE (E-Xl; FIG. 7)
rac-d S^RδSVδ-teff-Butyl^-hvdroxycvclohexyl benzoate (rac-E-IV) and rac- (1 S,2f?,4S)-4-tert-Butyl-2-hvdroxycvclohexyl benzoate (rac-E-V).
4-tert-Butylcatechol (E-I) (2.02 g, 12.2 mmol), Rh/AI2O3 (98.9 mg), cyclohexane (4 mL) and THF (0.5 mL) were hydrogenated under 5 bar at r.t. After 24 h the mixture was filtered through celite and evaporated to dryness. The residue was purified by MPLC on silica (CH2CI2/ethyl acetate, 3:1 to 1 :3) to afford a mixture of syn-diols (1.64 g, 78%, rac-E-\\:rac-E-\\\, 1.4:1 ) as a white solid. The mixture (1.64 g, 9.55 mmol) and dibutyltin oxide (2.37 g, 9.52 mmol) were dissolved in CH2CI2 (50 mL) and cooled to 00C. Et3N (2.68 mL, 19.2 mmol) and benzoyl chloride (1.32 mL, 11.45 mmol) were slowly added via syringe. The mixture was warmed to r.t. during 3 h and then quenched with MeOH (2 ml_). The solvents were evaporated in vacuo and the crude residue was purified by MPLC on silica (toluene/ethyl acetate, 10:0 to 10:1 ) affording rac-E-IV (1.15 g, 44%) and rac-E-V (688 mg, 26%) as white solids. rac-E-IV: 1H-NMR (CDCI3, 500.1 MHz) δ: 0.90 (s, 9 H, tBu), 1.23 (m, 1 H, H-5), 1.42 (m, 1 H, H-4a), 1.50-1.57 (m, 2 H, H-3a, H-4b), 1.68 (m, 1 H, H-6a), 1.85 (m, 1 H, H-6b), 2.04 (m, 1 H, H-3b), 4.17 (m, 1 H, H-2), 5.05 (ddd, 3J = 2.7, 4.7, 11.9 Hz, 1 H, H-1 ), 7.44-7.47, 7.56-7.59, 8.05-8.07 (3 m, 5 H, C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 19.59 (C-4), 26.42 (C-6), 27.51 (3 C, tBu), 30.57 (C-3), 32.49 (fBu), 46.35 (C-5), 67.10 (C-2), 76.47 (C-1 ), 128.39, 129.58, 130.27, 133.07 (6 C, C6H5), 165.62 (C=O); HR-MS (ESI) mlz: calcd for Ci7H24NaO3 [M+Na]+: 299.1618; found: 299.1621 (1.0 ppm). rac-E-V: 1H-NMR (CDCI3, 500.1 MHz) δ: 0.89 (s, 9 H, Bu), 1.18 (m, 1 H, H-5a), 1.34 (m, 1 H, H-3a), 1.56 (m, 1 H, H-4), 1.83-1.98 (m, 3 H, H-5b, H-6), 2.04 (m, 1 H, H-3b), 4.25 (m, 1 H, H-2), 4.98 (ddd, 3J = 2.8, 4.9, 11.7 Hz, 1 H, H-1 ), 7.44-7.47, 7.56-7.59, 8.04-8.06 (3 m, 5 H, C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 25.07 (C-5), 25.27 (C-6), 27.48 (3 C, tBu), 31.91 (tBu), 31.98 (C-3), 39.43 (C-4), 68.14 (C-2), 75.87 (C-1 ), 128.39, 129.58, 130.28, 133.06 (6 C, C6H5), 165.72 (C=O); HR-MS (ESI) mlz: calcd for C17H24NaO3 [M+Na]+: 299.1618; found: 299.1621 (1.0 ppm).
rac-(1 R2R4ffl-2-(Benzoyloxy)-4-terf-butylcvclohexyl 3.5-dinitrobenzoate (rac- E-Vl) rac-E-W/ (400 mg, 1.45 mmol), triphenylphosphine (1.14 g, 4.33 mmol) and 3,5-dinitrobenzoic acid (921 mg, 4.34 mmol) were dissolved in toluene (25 imL). Diethyl azodicarboxylate (680 μl_, 4.32 mmol) was slowly added to the reaction via syringe. The mixture was warmed to 500C and stirred for 1 d. The solvent was evaporated in vacuo and the residue, redissolved in a small amount of CH2CI2, was purified by MPLC on silica (petroleum ether/ethyl acetate, 10:0 to 10:1 ) affording rac-E-VI (428 mg, 63%) and recovered starting material rac-E-IV (103 mg, 26%) as white solids. 1H-NMR (CDCI3, 500.1 MHz) δ: 0.93 (s, 9 H, IBu), 1.25-1.47 (m, 3 H, H-3a, H-4, H-5a), 1.68 (m, 1 H, H-6a), 1.94 (m, 1 H, H-5b), 2.29-2.35 (m, 2 H1 H-3b, H-6b), 5.27 (ddd, 3J = 4.9, 9.7, 11.4 Hz, 1 H, H-1 ), 5.35 (ddd, 3J = 4.7, 9.9, 10.5 Hz, 1 H, H-2), 7.36-7.39, 7.48-7.52, 7.96-7.98 (3 m, 5 H, C6H5), 9.06, 9.14-9.15 (2 m, 3 H, C6H3); 13C-NMR (CDCI3, 125.8 MHz) δ: 24.79 (C-5), 27.52 (3 C, IBu), 29.76 (C-6), 31.79 (C-3), 32.36 (Bu), 45.73 (C-4), 74.80 (C-2), 77.55(C-1 ), 122.31 , 128.39, 129.44, 129.58, 129.74, 133.17, 133.81 , 148.54 (12 C, C6H5, C6H3), 162.16, 165.89 (2 C=O); HR-MS (ESI) m/z: calcd for C24H26N2NaO8 [M+Na]+: 493.1581 ; found: 493.1582 (0.2 ppm).
rac-l 1 R2R5ff)-5-terf-Butyl-2-hvdiOxycvclohexyl benzoate (rac-E-VII). rac-E-VI (135 mg, 0.287 mmol) was suspended in MeOH (5 ml_). Et3N (1 ml_) was added and the reaction stirred for 1 h. The solvents were evaporated in vacuo and the residue was purified by MPLC on silica (toluene/ethyl acetate, 6:0 to 6:1 ) affording rac-E-VII (63.2 mg, 80%) as a white solid.
1H-NMR (CDCI3, 500.1 MHz) δ : 0.88 (s, 9 H, Bu), 1.12 (m, 1 H, H-4a), 1.19-1.32 (m, 2 H, H-5, H-6a), 1.41 (m, 1 H, H-3a), 1.80 (m, 1 H, H-4b), 2.12-2.18 (m, 2 H, H-3b, H-6b), 3.69 (ddd, 3J = 4.9, 9.3, 11.3 Hz, 1 H, H-2), 4.88 (ddd, 3J = 4.7, 9.4, 10.7 Hz, 1 H, H-1 ), 7.43-7.46, 7.55-7.58, 8.06-8.07 (3 m, 5 H, C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 24.89 (C-4), 27.54(3 C, ffiu), 31.44 (C-6), 32.28 (Bu), 32.61 (C-3), 46.01 (C-5), 73.33 (C-2), 79.47 (C-1 ), 128.34, 129.64, 130.23, 133.05 (6 C, C6H5), 166.82 (C=O); HR-MS (ESI) m/z: calcd for C17H24NaO3 [M+Na]+: 299.1618; found: 299.1619 (0.3 ppm).
TM /?.2R5f?)-5-terf-Butyl-1 -hvdroxy-cvclohex-2-yll 2.3.4-tris-O-benzyl-6-deoxy- α- and β-L-qalactopyranoside (E-VIII) and r(1 S,2S.5S)-5-tert-Butyl-1-hvdroxy- cvclohex-2-yll 2.3,4-tris-O-benzyl-6-deoxy-α-L-galactopyranoside (E-IX).
A mixture of rac-E-VII (76.9 mg, 0.278 mmol), A-Vl (202 mg, 0.421 mmol), Bu4NBr (274 mg, 0.850 mmol) and powdered 4A molecular sieves (1 g) in CH2CI2 (4 ml_) and DMF (1 ml_) was stirred at r.t. under argon for 3.5 h. Then, CuBr2 (188 mg, 0.844 mmol) was added and the reaction mixture was stirred at r.t. for 11 h. The reaction mixture was filtered through celite and the filtrate was diluted with CH2CI2 (30 mL). The organic layer was successively washed with satd. aqueous NaHCO3 and brine (each 30 mL) and the aqueous layers were extracted with CH2Cb (3 x 40 mL). The combined organic layers were dried with Na2SO4, filtered and co-evaporated with toluene to dryness. The residue was purified by MPLC on silica (petroleum ether/CH2CI2/diethyl ether, 2:1 :0 to 2:1 :1 ) to afford the fucosylated diastereomers. To a stirred solution of these diastereomers in methanol/water (5:1 , 6 mL), lithium hydroxide (200 mg) was added and the mixture warmed to 5O0C. After stirring for 4 h the reaction mixture was diluted with CH2CI2 (30 mL) and the organic layer was washed with brine (50 mL). The aqueous layer was extracted with CH2CI2 (3 x 30 mL), and the combined organic layers were dried with Na2SO-J, filtered and concentrated in vacuo. The residue was purified by MPLC on silica (petroleum ether/ethyl acetate, 4:0 to 4:1 ) to yield E-VIII (72.1 mg, 44%, α:β = 1 :0.12, yield over two steps) as an anomeric mixture and E-IX (63.0 mg, 38%, yield over two steps) as pure α-anomer. α-E-VIII: [α]D 21 = -41.3 (c = 0.31 , CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ: 0.86 (s, 9 H, JBu)1 0.97-1.38 (m, 7 H, Fuc H-6, H-3a, H-4a, H-5, H-6a), 1.74 (m, 1 H, H-4b), 1.99-2.06 (m, 2 H, H-3b) H-6b), 3.22 (m, 1 H, H-2), 3.47 (m, 1 H, H-1 ), 3.70 (m, 1 H, Fuc H-4), 3.94 (dd, 3JF3,F4 = 2.4 Hz, 3JF2,F3 = 10.1 Hz, 1 H, Fuc H-3), 4.05-4.09 (m, 2 H, Fuc H-2, Fuc H-5), 4.65, 4.66, 4.75, 4.82, 4.87 (5 m, 5 H, CH2Ph), 4.97-5.00 (m, 2 H, Fuc H-1 , CH2Ph), 7.26-7.41 (m, 15 H, 3 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 16.65 (Fuc C-6), 25.17 (C-4), 27.55 (3 C, tBu), 29.54 (C-3), 32.19 (ffiu), 33.63 (C-6), 45.82 (C-5), 66.97 (Fuc C-5), 73.15, 73.33 (2 CH2Ph), 73.52 (C-1 ), 74.86 (CH2Ph), 76.16 (Fuc C-2), 77.41 (Fuc C-4), 79.21 (Fuc C-3), 84.09 (C-2), 96.33 (Fuc C-1 ), 127.40, 127.48, 127.64, 127.69, 127.90, 128.21 , 128.35, 128.44, 138.41 , 138.50, 138.81 (18 C, 3 C6H5); HR-MS (ESI) m/z: calcd for C37H48NaO6 [M+Na]+: 611.3343; found: 611.3346 (0.5 ppm). E-IX: [OC]D21 = -40.7 (C = 0.38, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ: 0.85 (s, 9 H, ffiu), 1.01-1.17 (m, 6 H, Fuc H-6, H-4a, H-5, H-6a), 1.29 (m, 1 H1 H-3a), 1.70 (m, 1 H1 H-4b), 1.97-2.04 (m, 2 H, H-3b, H-6b), 3.17 (m, 1 H, H-2), 3.45 (m, 1 H, H-1 ), 3.69 (m, 1 H, Fuc H-4), 3.96-4.05 (m, 3 H, Fuc H-2, Fuc H-3, Fuc H-5), 4.66, 4.73, 4.76, 4.81 , 4.87, 4.97 (6 m, 6 H, CH2Ph), 4.98 (m, 1 H, Fuc H-1), 7.26-7.41 (m, 15 H, 3 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 16.69 (Fuc C-6), 25.32 (C-4), 27.58 (3 C, Bu), 31.26 (C-3), 32.25 (fBu), 32.88 (C-6), 45.78 (C-5), 66.57 (Fuc C-5), 72.63, 74.19 (2 CH2Ph), 74.66 (C-1 ), 74.80 (CH2Ph), 76.33 (Fuc C-2), 77.40 (Fuc C-4), 80.01 (Fuc C-3), 87.22 (C-2), 101.01 (Fuc C-1 ), 127.34, 127.52, 127.58, 127.84, 128.18, 128.22, 128.34, 128.39, 128.47, 137.95, 138.53, 138.65 (18 C, 3 C6H5).
((1f?.2f?.5f?)-2-r(2.3.4-tris-O-benzyl-6-deoxy-α-L-qalactopyranosyl)oxyl-5-te/t- butyl-cvclohex-1 -yl) 2.4.6-tri-O-benzoyl-3-O-r(1 S)- 1 -benzyloxycarbonyl-2- cvclohexyl-ethyll-β-D-qalactopyranoside (E-X). According to general procedure C, thioglycoside A-Vl (125 mg,
0.161 mmol) and glycosyl acceptor E-VIII (71.4 mg, 0.121 mmol) in dry CH2CI2 (4 mL) were added via syringe to activated 4A molecular sieves (1 g). A suspension of DMTST (120 mg, 0.465 mmol) and activated 4A molecular sieves (500 mg) in CH2CI2 (2 mL) was prepared in a second flask. Both suspensions were stirred at r.t. for 2 h, before adding the DMTST suspension via syringe to the other suspension with some additional CH2CI2 (1 mL). The reaction was stopped after 45 h and worked-up according to general procedure C. The crude product was purified by MPLC on silica (toluene/ethyl acetate, 11.5:0 to 11.5:1 ) to yield E-X (107 mg, 68%) as a colorless foam. [α]D 21 = -57.9 (c = 0.50, CHCI3); 1H-NMR (CDCI3, 500.1 MHz) δ:
0.46-1.43 (3 m, 17 H, CyCH2, Cy), 0.58 (s, 9 H, IBu), 1.36 (d, 3J = 6.0 Hz, 3 H, Fuc H-6), 1.60 (m, 1 H, H-4b), 1.81 (m, 1 H, H-6b), 1.99 (m, 1 H, H-3b), 3.45 (m, 1 H, H-2), 3.55 (m, 1 H, H-1 ), 3.58 (s, 1 H, Fuc H-4), 3.87-3.90 (m, 2 H1 GaI H-3, GaI H-5), 3.97-4.04 (m, 2 H, Fuc H-2, Fuc H-3), 4.16 (m, 1 H, Lac H-2), 4.29 (m, 2 H, GaI H-6), 4.39 (m, 1 H, CH2Ph), 4.55-4.57 (m, 2 H, GaI H-1 , CH2Ph), 4.63 (m, 1 H, CH2Ph), 4.69-4.74 (m, 2 H, CH2Ph), 4.79-4.83 (m, 2 H, Fuc H-5, CH2Ph), 4.88 (d, 3JFI,F2 = 2.1 Hz, 1 H, Fuc H-1 ), 5.04, 5.13 (2 m, 2 H, CH2Ph), 5.56 (m, 1 H, GaI H-2), 5.91 (m, 1 H, GaI H-4), 7.17-7.35, 7.39-7.48, 7.54-7.55, 8.04-8.11 (m, 35 H, 7 C6H5); 13C-NMR (CDCI3, 125.8 MHz) δ: 16.62 (Fuc C-6), 24.43 (C-4), 25.40, 25.71 , 26.06 (3 C, CyCH2), 27.19 (3 C, ffiu), 28.97 (C-3), 31.95 (tBu), 32.23 (C-6), 32.49, 33.17, 33.44 (3 C, CyCH2), 40.44 (CyCH2), 45.50 (C-5), 62.21 (GaI C-6), 65.98 (Fuc C-5), 66.58 (CH2Ph), 69.86 (GaI C-4), 71.19 (GaI C-5), 72.53, 72.56 (GaI C-2, CH2Ph), 73.02 (CH2Ph), 74.90 (CH2Ph), 75.25 (C-2), 76.44 (Fuc C-2), 77.51 (GaI C-3), 78.08 (Lac C-2), 79.24 (Fuc C-4), 79.64 (Fuc C-3), 81.37 (C-1 ), 94.16 (Fuc C-1 ), 100.24 (GaI C-1 ), 126.87, 126.95, 127.22, 127.38, 127.93, 127.95, 128.03, 128.15, 128.34, 128.42, 128.47, 128.50, 129.64, 129.74, 129.83, 129.88, 129.91 , 133.04, 133.16, 133.21 , 135.43, 138.86, 139.08, 139.14 (42 C, 7 C6H5), 164.56, 165.65, 166.11 , 172.47 (4 C=O); elemental analysis calcd (%) for C80H90O16 (1307.56): C 73.48, H 6.94; found: C 73.50, H 6.95.
((1R,2f?,5f?)-5-teft-Butyl-2-r(6-deoxy-α-L-galactopyranosyl)oxy1-cyclohex-1-yl> 2-O-benzoyl-3-O-f(1 S)-1-carboxy-2-cvclohexyl-ethyl]-β-D-galactopyranoside (E- Xl: Fig. 7).
A mixture of E-X (102 mg, 77.9 μmol), Pd(OH)2/C (49.4 mg), dioxane (3 ml_) and water (0.75 ml_) was hydrogenated under 4 bar at r.t. After 37 h TLC control indicated completion of the reaction and the mixture was filtered through celite and evaporated to dryness. The residue was redissolved in methanol (5 mL) and sodium methoxide (0.195 mmol in 255 μL MeOH) was added. After stirring at r.t. for 14 h the reaction was quenched by addition of acetic acid (23 μL). The mixture was concentrated in vacuo and purified by preparative, reversed-phase HPLC to afford compound E-Xl (50.9 mg, 88%) as a white solid.
[α]D 21 = -93.2 (c = 0.91 , MeOH); 1H-NMR (MeOD, 500.1 MHz) δ: 0.60-0.77 (m, 5 H, H-6a, CyCH2), 0.65 (s, 9 H, tBu), 0.84 (m, 1 H, H-4a), 0.93 (m, 1 H, CyCH2), 1.01 (m, 1 H, H-5), 1.15 (m, 1 H, H-3a), 1.26 (d, 3v/F5,F6 = 6.6 Hz, 3 H, Fuc H-6), 1.29-1.39 (m, 5 H, CyCH2), 1.43 (m, 1 H, CyCW2), 1.53 (m, 1 H, CyCH2), 1.60-1.66 (m, 2 H, H-4b, CyCH2), 1.95 (m, 1 H, H-6b), 2.05 (m, 1 H, H-3b), 3.33 (m, 1 H, H-2), 3.56-3.61 (m, 2 H, H-1 , GaI H-5), 3.69-3.74 (m, 4 H, Fuc H-2, Fuc H-4, GaI H-3, GaI H-6a), 3.79 (m, 3JG6b,G5 = 6.9 Hz, 2JG6a,G6b = 11 -3 Hz, 1 H, GaI H-6b), 3.91 (dd, 3JF3,F4 = 3.4 Hz, 3JF2,F3 = 10.1 Hz, 1 H, Fuc H-3), 4.00 (m, 1 H, GaI H-4), 4.10 (dd, 3J= 2.9, 10.0 Hz, 1 H, Lac H-2), 4.67 (d, 3JGI,G2 = 8.0 Hz, 1 H, GaI H-1 ), 4.77 (m, 1 H, Fuc H-5), 4.82 (d, 3JF1,F2 = 3.8 Hz, 1 H, Fuc H-1 ), 5.36 (dd, 3JG1,G2 = 8.0 Hz, 3JG2,G3 = 9.8 Hz, 1 H, GaI H-2), 7.49-7.52 (m, 2 H, C6H5), 7.61-7.64 (m, 1 H, C6H5), 8.10-8.12 (m, 2 H, C6H5); 13C-NMR (MeOD, 125.8 MHz) δ: 16.53 (Fuc C-6), 25.74 (C-4), 26.60, 26.82, 27.30 (3 C, CyCH2), 27.78 (3 C, tBu), 29.73 (C-3), 32.83 (tBu), 33.11 (CyCH2), 33.74 (C-6), 34.26 (Lac C-4), 35.12 (CyCH2), 42.76 (Lac C-3), 47.02 (C-5), 62.69 (GaI C-6), 67.38 (Fuc C-5), 67.99 (GaI C-4), 70.03 (Fuc C-2), 71.57 (Fuc C-3), 73.63 (GaI C-2), 73.96 (Fuc C-4), 76.02 (GaI C-5), 76.90 (C-2), 78.03 (Lac C-2), 81.57 (C-1), 83.17 (GaI C-3), 96.51 (Fuc C-1), 101.13 (GaI C-I), 129.74, 130.90, 131.70, 134.40 (6 C, C6H5), 166.83 (C=O), 178.78 (COOH); HR-MS (ESI) m/z: calcd for C38H58NaOi4 [M+H]+: 761.3719; found: 761.3723 (0.5 ppm).
EXAMPLE 8
{(1 /?,2R,3S,5f?)-2-[(DEOXY-α-L-GALACTOPYRANOSYL)OXY]-3,5-DIMETHYL- CYCLOHEX-1 -YL} 2-O-BENZOYL-3-O-[(1 S)-1 -CARBOXY^-CYCLOHEXYL-ETHYLj-β-D-
GALACTOPYRANOSiDE SODIUM SALT (F-Vl; FIG. 8)
r(1 f?.2R3S.5R)-1-te/t-Butyldimethylsilyloxy-5-hvdroxymethyl-3-methyl- cvclohex-2-yll 2.3.4-tris-O-benzyl-6-deoxy-a-L-qalactopyranoside (F-I).
To a solution of X (137 mg, 0.191 mmol) in dry THF (2 mL) was added a solution of 1 M LiAIH4 (667 μL, 0.667 mmol) in THF at 00C under argon over a period of 10 min. After 1 h the reaction was quenched with satd. aqueous (NH4J2SO4 (0.5 mL) and stirred at r.t. for 1 h. Then the mixture was dried with Na2SO4, filtered and the solvent evaporated in vacuo. Column chromatography (petroleum ether/ethyl acetate, 6:1 ) of the residue gave F-I (110 mg, 84%).
[α]D 20 = -51.3 (c = 0.335, CHCI3); ESI-MS m/z: calcd for C4IH58NaO7Si [IvRNa]+: 713.38; found: 713.35.
[(IR^RSS.δRVI-te/t-Butyldimethylsilyloxy-δ-chloromethyl-S-methyl-cvclohex- 2-yll 2,3.4-tris-O-benzyl-6-deoxy-α-L-qalactopyranoside (F-Il).
To a solution of F-I (105 mg, 0.152 mmol) in dry DCE (1.5 ml_) under argon 1-chloro-Λ/,Λ/,2-trimethylpropenylamine (43 μl_, 0.304 mmol) was added dropwise. After stirring for 45 min at r.t. the reaction was quenched with MeOH/25% aqueous NH3 (1 :1 , 0.5 ml_) and evaporated to dryness. Column chromatography (petroleum ether/ethyl acetate, 19:1 ) of the residue yielded F-Il (91 mg, 85%).
[α]D 20 = -46.3 (c = 2.20, CHCI3); ESI-MS m/z: calcd. for C4IH57CINaO6Si [M+Na]+: 731.34; found 731.42.
fdR^RSS.δffl-i-teAt-Butyldimethylsilyloxy-S.δ-dimethyl-cvclohex^-yll 2.3.4- tris-O-benzyl-6-deoxy-α-L-qalactopyranoside (F-III).
To a solution of F-Il (89 mg, 0.125 mmol) and AIBN (21 mg, 0.127 mmol) in dry THF (1.5 ml_) was added freshly distilled Bu3SnH (366 μl_, 1.38 mmol) via a syringe under argon. After stirring for 90 min at 9O0C the mixture was cooled to r.t. and diluted in MeCN (5 ml_). The solution was washed with hexane (5 ml_) and the layers were separated. The hexane layer was washed with MeCN (2 x 5 ml_). The combined MeCN layers were evaporated in vacuo and the residue purified by column chromatography (petroleum ether + 4% ethyl acetate) to yield F-III (60 mg, 71%). [α]D 20 = -43.6 (c = 1.28, CHCI3); ESI-MS m/z: calcd. for
C4IH58NaO6Si [M+Na]+: 697.97; found 697.47. rdR^RaS.Sffl-i-Hvdroxy-S.δ-dimethyl-cvclohex^-vn ∑.SΛ-tris-O-benzyl-e- deoxy-α-L-αalactopyranoside (F-IV).
A mixture of F-III (70 mg, 0.104 mmol), THF (1.5 ml_), AcOH (1.8 ml_) and H2O (1.5 mL) was stirred for 4 h at 8O0C. The mixture was cooled to r.t., neutralized with satd. aqueous NaHCO3 (approx. 14 mL), diluted with DCM (15 mL) and washed with water (15 mL). The aqueous layer was then extracted with DCM (2 x 10 mL). The combined organic layers were dried with NaSO-i, filtered and evaporated to dryness. Column chromatography (petroleum ether/ethyl acetate, 8:1) of the crude product gave F-IV (40 mg, 68%).
[α]D 20 = -40.8 (c = 2.00, CHCI3); ESI-MS m/z\ calcd. for C35H44NaO6 [M+Na]+: 583.30; found 583.18.
U1 R.2R.3S.5R)-2-r(2.3.4-tris-O-benzyl-6-deoxy-α-L-qalactopyranosyl)oxy1-3.5- dimethyl-cvclohex-1 -yl) 2.4,6-tri-O-benzoyl-3-O-r(1 S)-1 -benzyloxycarbonyl-2- cvclohexyl-ethyll-β-D-galactopyranoside (F-V).
A mixture of F-IV (45 mg, 80.3 μmol), A-Vl (85 mg, 108 μmol) and activated powdered molecular sieves 4A (1 g) in DCM (2 mL) was stirred at r.t. under argon for 4 h. Then a pre-stirred mixture (4 h, r.t.) of DMTST (83 mg, 0.321 mmol) and activated powered molecular sieves 4A (200 mg) in dry DCM (2 mL) was added. After 24 h the reaction mixture was filtered over Celite and the filtrate was diluted with DCM (10 mL). The organic layer was washed with satd. aqueous NaHCO3 and brine (each 5 mL) and the aqueous layers were extracted with DCM (2 χ 5 ml). The combined organic layers were dried with Na2SO4, filtered and evaporated to dryness. The residue was purified by column chromatography on silica gel (petroleum ether/ethyl acetate, 6:1 ) to yield F-V (63 mg, 62%).
[α]D 20 = -47.0 (c = 2.17, CHCI3); ESI-MS m/z: calcd. for C78H86NaOi6 [M+Na]+: 1301.58; found 1301.64. ((1 /?.2R.3S.5/?)-2-r(deoxy-α-L-qalactopyranosvπoxy1-3.5-dimethyl-cvclohex-1- yl) 2-O-benzoyl-3-O-f(1 S)- 1 -carboxy-2-cvclohexyl-ethyll-β-D-αalactopyranoside sodium salt (F-VI: Fig. 8).
A mixture of F-V (50 mg, 39.1 μmol), Pd(OH)2/C (27 mg, 10% Pd), dioxane (1.5 ml_) and water (400 μl_) was hydrogenated in a Parr-shaker at 5 bar. After 4 h the mixture was filtered over Celite and evaporated to dryness. The residue was re-dissolved in MeOH (3 ml_) and NaOMe (97.8 μmol in 160 μl_ MeOH) was added. After stirring at r.t. for 16 h the reaction was quenched with AcOH (10 μl_), concentrated in vacuo and purified by preparative, reversed-phase HPLC. The freeze-dried product was re-dissolved in water and one equivalent of NaOH was added. The solution was lyophilized from water to afford F-Vl (23.3 mg, 80%) as a white solid.
[α]D 20 = -89.0 (c = 1.16, H2O); ESI-MS mlz: calcd. for C36H54NaO14 [M+H]+: 733.34; found 733.41.
EXAMPLE 9
SYNTHESIS OF COMPOUND G-IV (FIG. 12)
Synthesis of intermediate G-Il: Compound XXII (100 mg; Example 2) was treated with 0.01 N NaOEt in EtOH (2ml) 2h at room temperature, neutralized with AcOH and the solution was evaporated to dryness. The residue was purified by column chromatography to give G-Il (47 mg).
Synthesis of intermediate G-III: Compound G-Il (250 mg) was dissolved in dioxane-water (10:1 , 6.6 ml) and treated with 10% Pd/C under atmosphere of hydrogen for overnight. Solid was filtered off and filtrate was evaporated to dryness. The residue was purified by column chromatography (silica gel) to give compound G-III (100mg).
Synthesis of compound G-IV: NH2OH. HCI (64 mg) was dissolved in H2O (0.5ml). To this solution was added a solution of NaOH (70mg) in H2O (0.5ml). Compound G-111 (25mg) in MeOH (0.5ml) was added to the above solution with stirring at room temperature. The mixture was stirred at room temperature for 15 min and then neutralized to pH 7.0 by adding 1 N HCI solution. Solvent was evaporated off and the residue was purified by column chromatography (silica gel) to give compound G-IV.
EXAMPLE 10
SYNTHESIS OF COMPOUND H-IV (FIG. 13)
Synthesis of intermediate H-Il: Compound F-V (100 mg; Example 8) was treated with 0.01 N NaOEt in EtOH (2ml) 2h at room temperature, neutralized with AcOH and the solution was evaporated to dryness. The residue was purified by column chromatography to give H-Il (55 mg).
Synthesis of intermediate H-III: Compound H-Il (125 mg) was dissolved in dioxane-water (10:1 , 6.6 ml) and treated with 10% Pd/C under atmosphere of hydrogen for overnight. Solid was filtered off and filtrate was evaporated to dryness. The residue was purified by column chromatography (silica gel) to give compound H-III (75mg).
Synthesis of compound H-IV: Compound H-III is treated in the same way as described for the synthesis of G-IV to give H-IV.
EXAMPLE 11
SYNTHESIS OF PEGYLATED MIMIC (FIG. 10)
Synthesis of Second Compound of Fig. 10
First compound (100 mg) of Fig. 10 was mixed with ethylenediamine under the argon. The resulting mixture was heated at 700C for 7 hr. After evaporation, the residue was purified on C-18 column to afford 55 mg second compound. Yield 68% PEGylation of Second Compound of Fig. 10
Second compound (5 mg) was mixed with mPEG- nitrophenylcarbonate (5K) 75 mg , triethylamine 5 ul in DMF (2 ml_). The resulting mixture was stirred at rt for 3 h. The solvent was removed at reduced pressure. The residue was purified on C-18 to afford 40 mg product.
EXAMPLE 12 SYNTHESIS OF TETRAMER PEGYLATED MIMIC (FIG. 11 )
Second compound (20 mg) from Example 11 was mixed with 200 mg 4-arm PEG glutamidylsuccinate , triethylamine 5 ul and DMF 2 mL The resulting mixture was stirred at rt for 2 hr. After removing the solvent, the residue was purified on HPLC to afford the product.
EXAMPLE 13 E-SELECTIN ASSAY
E-selectin Protocol: The inhibition assay to screen glycomimetic antagonists of E-selectin is a competitive binding assay, which allows the determination of IC50 values. Briefly, E-selectin/lg chimera is immobilized by incubation at 370C in 96 well microtiter plates for 2 hours. To reduce nonspecific binding, bovine serum albumin is added to each well and incubated at room temperature for 2 hours. The plate is washed and serial dilutions of the test compounds are added to the wells in the presence of conjugates of biotinylated, sLea polyacrylamide with streptavidin/horseradishperoxidase and incubated for 2 hours at room temperature. To determine the amount of sLea bound to immobilized E-selectin after washing, the peroxidase substrate, 3,3\5,51 tetramethylbenzidin (TMB) is added. After 3 minutes, the enzyme reaction is stopped by the addition of H3PO4 and the absorbance of light at a wavelength of 450 nm is determined. The concentration of test compound required to inhibit binding by 50% is determined and reported as the IC50 value for each glycomimetic E-selectin antagonist. In addition to reporting the absolute IC50 value as measured above, relative IC50 values are determined by a ratio of the IC50 measured for the test compound to that of a glycomimetic internal control (reference) for each assay. The results from the testing in this assay of several of the compounds disclosed herein are shown below.
Compounds IC50 (μM) 1ΪC50
#1 15.5 0.076
#2 10.1 0.049
#3 3.75 0.027
All of the above U.S. patents, U.S. patent application publications, U.S. patent applications, foreign patents, foreign patent applications and non- patent publications referred to in this specification and/or listed in the Application Data Sheet, are incorporated herein by reference, in their entirety. From the foregoing it will be appreciated that, although specific embodiments of the invention have been described herein for purposes of illustration, various modifications may be made without deviating from the spirit and scope of the invention.

Claims

1. A method of preparing an oligosaccharide mimic comprising incorporating at least one cyclohexane derivative into an oligosaccharide or glycomimetic compound, wherein the cyclohexane derivative has the formula:
Figure imgf000101_0001
wherein,
R1 = H, Ci-C8 alkanyl, Ci-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, CrC8 alkenyl, d-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH;
R2 = H1 CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is Ci-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(=O)NHX or CX2OH, where X = CrC8 alkanyl, C1-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R1 or R2.
2. A method for substituting a monosaccharide mimic for at least one hexose or hexosamine in an oligosaccharide compound or glycomimetic compound or in an oligosaccharide or glycomimetic of an oligosaccharide-containing or glycomimetic-containing compound comprising replacing at least one hexose or hexosamine in an oligosaccharide or glycomimetic compound with a cyclohexane derivative, wherein the cyclohexane derivative has the formula:
Figure imgf000102_0001
wherein,
R1 = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, Ci-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH;
R2 = H, CrC8 alkanyl, CrC8 alkenyl, d-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is d-C8 alkanyl, d-C8 alkenyl, CrC8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(=O)NHX or CX2OH, where X = CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R1 or R2.
3. An oligosaccharide or glycomimetic compound that contains at least one cyclohexane derivative, wherein the cyclohexane derivative has the formula:
Figure imgf000104_0001
wherein,
R1 = H, CrC8 alkanyl, CrC8 alkenyl, Ci-Ce alkynyl, halogenated Ci-Ce alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated Ci-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = CrC8 alkanyl, d-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(O)X, where X = H, CrC8 alkanyl, CrC8 alkenyl, C1-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH;
R2 = H, C1-C8 alkanyl, CrC8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, C1-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(=O)NHX or CX2OH, where X = CrC8 alkanyl, CrC8 alkenyl, d-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, C1-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
the cyclohexane derivative is at least attached to the oligosaccharide or glycomimetic compound at an OH, R1 or R2.
4. A compound comprising:
Figure imgf000105_0001
R1 = H, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, CrC8 alkanyl, CrC8 alkenyl, d-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; C(=O)OX, alkanyl substituted with C(=O)OX, C(=O)NHX, alkanyl substituted with C(=O)NHX, where X = C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated C1-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH;
R2 = H, CrC8 alkanyl, d-C8 alkenyl, Ci-C8 alkynyl, halogenated d-C8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, OH, or NHX where X = H, d-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)OX where X is Ci-C8 alkanyl, CrC8 alkenyl, Ci-C8 alkynyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; -C(=O)NH(CH2)nNH2 where n = 0-30, C(O)NHX or CX2OH, where X = CrC8 alkanyl, Ci-C8 alkenyl, CrC8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; O(=O)X, OX, NHX, NH(=O)X, where X = H, C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl, halogenated CrC8 alkanyl, aryl or heteroaryl either of which may be substituted with one or more of Me, OMe, halide, or OH; with the proviso that R1 and R2 are not both H;
Figure imgf000106_0001
-0-C(O)-X, -NH2, -NH-C(O)-NHX, or -NH-C(O)-X where n = 0-2 and X is independently selected from d-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl,
Figure imgf000106_0002
Figure imgf000107_0001
Figure imgf000107_0002
and where Q is H or a
Figure imgf000107_0003
physiologically acceptable salt, CrC8 alkanyl, Ci-Cs alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where n = 0-10, and any of the above ring compounds may be substituted with one to three independently selected of Cl, F, CF3, CrC8 alkoxy, NO2, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, CrCi4 aryl, or OY, C(=O)OY, NY2 or C(O)NHY where Y is H, C1-C8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, or CrCi4 aryl;
Figure imgf000107_0004
6'sulfated GIcNAc, 6'carboxylated GIcNAc, 6'sulfated GaINAc, 6'sulfated galactose, 6'carboxylated galactose,
where Q is H or a physiologically acceptable salt or Ci-Ce
Figure imgf000108_0001
alkanyl, CrCe alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)n-aryl or (CH2)n-heteroaryl where n is 1-10, and where R9 is aryl, heteroaryl, cyclohexane, t-butane, adamantane, or triazole, and any of R9 may be substituted with one to three independently selected of Cl, F, CF3, C1-C8 alkoxy, NO2, CrC8 alkanyl, CrC8 alkenyl, Ci-C8 alkynyl or OY, C(=O)OY, NY2 or C(=O)NHY where Y is H, C1-C8 alkanyl, C1-C8 alkenyl, C1-C8 alkynyl or C1-C14 aryl; or
Figure imgf000108_0002
where R10 is one of
.NH2
Figure imgf000108_0003
Figure imgf000108_0004
Figure imgf000109_0001
where Q is H or a physiologically acceptable salt, CrCe alkanyl, Ci-Ce alkenyl, d-Cβ alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, n = 1 - 4, Z and Y = CrC8 alkanyl, CrC8 alkenyl, Ci-C8 alkynyl, halogenated CrC8 alkanyl, aryl and heteroaryl substituted with Me1 OMe, halide, OH; and
R J5 _= H, D-mannose, L-galactose, D-arabinose, L-fucose, polyols
where X = CF3, cyclopropyl or phenyl,
Figure imgf000109_0002
or wnere Q is H or a physiologically acceptable salt,
Figure imgf000109_0003
Ci-C8 alkanyl, d-C8 alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl
or (CH2)m-heteroaryl where m is 1-10,
and where R )11 is aryl, heteroaryl,
Figure imgf000109_0004
Figure imgf000109_0005
Figure imgf000110_0001
where Q is H or a physiologically acceptable salt, CrC8 alkanyl, CrC8 alkenyl, CrC8 alkynyl, aryl, heteroaryl, (CH2)m-aryl or (CH2)m-heteroaryl where m is 1-10, and where n = 0-10, and any one of the above ring compounds may be substituted with one to three independently selected of Cl, F, CrC8 alkanyl, Ci-C8 alkenyl, CrC8 alkynyl or OY where Y is H, CrC8 alkanyl, CrC8 alkenyl or CrC8 alkynyl.
5. A compound consisting of the compound of claim 4.
6. The compound according to claim 5 having the formula:
Figure imgf000110_0002
where Q is H or a physiologically acceptable salt, and Me is methyl.
7. The compound according to claim 5 having the formula:
Figure imgf000111_0001
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
8. The compound according to claim 5 having the formula:
Figure imgf000111_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
9. The compound according to claim 5 having the formula:
Figure imgf000112_0001
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
10. The compound according to claim 5 having the formula:
Figure imgf000112_0002
where Q is H or a physiologically acceptable salt, and Me is methyl.
11. The compound according to claim 5 having the formula:
Figure imgf000113_0001
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
12. The compound according to claim 5 having the formula:
Figure imgf000113_0002
where Me is methyl.
13. The compound according to claim 5 having the formula:
Figure imgf000114_0001
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
14. The compound according to claim 5 having the formula:
Figure imgf000114_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
15. The compound according to claim 5 having the formula:
Figure imgf000115_0001
where Q is H or a physiologically acceptable salt, and Me is methyl.
16. The compound according to claim 5 having the formula:
Figure imgf000115_0002
where Q is H or a physiologically acceptable salt, Me is methyl and Bz is benzoyl.
17. The compound according to claim 5 having the formula:
Figure imgf000116_0001
where Q is H or a physiologically acceptable salt, and Me is methyl.
18. The compound according to claim 5 having the formula:
Figure imgf000116_0002
where Me is methyl, Et is ethyl and Bz is benzoyl.
19. The compound according to claim 5 having the formula:
Figure imgf000116_0003
where Me is methyl and Bz is benzoyl.
20. The compound according to claim 5 having the formula:
Figure imgf000117_0001
where Me is methyl, Et is ethyl and Bz is benzoyl.
21. The compound according to claim 5 having the formula:
Figure imgf000117_0002
where Me is methyl and Bz is benzoyl.
22. The compound according to claim 4 with polyethylene glycol attached thereto.
23. The compound according to claim 4 attached to another of the compound according to claim 4 by polyethylene glycol.
24. The compound according to claim 5 with polyethylene glycol attached thereto.
25. The compound according to claim 5 attached to another of the compound according to claim 5 by polyethylene glycol.
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US9109002B2 (en) 2011-12-22 2015-08-18 Glycomimetics, Inc. E-selectin antagonist compounds, compositions, and methods of use
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WO2014149837A1 (en) * 2013-03-15 2014-09-25 Glycomimetics, Inc. Compounds and methods to enhance the oral availability of glycomimetics
US11845771B2 (en) 2018-12-27 2023-12-19 Glycomimetics, Inc. Heterobifunctional inhibitors of E-selectin and galectin-3
WO2020219417A1 (en) 2019-04-24 2020-10-29 Glycomimetics, Inc. Galactose-linked multimeric glycomimetic inhibitors of e-selectins, galectin-3, and/or cxcr4 chemokine receptors

Family Cites Families (113)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4471057A (en) 1981-06-30 1984-09-11 The Wistar Institute Detection of colorectal carcinoma
DK17885D0 (en) 1985-01-14 1985-01-14 Karlsson Karl Anders ANTIVIRAL AGENT
US4876199A (en) 1985-04-04 1989-10-24 Fred Hutchinson Cancer Research Center Hybridomas producing monoclonal antibodies to mono-, di-, and trifucosylated type 2 chain
US4851511A (en) 1986-01-30 1989-07-25 Fred Hutchinson Cancer Research Center Monoclonal antibody that specifically binds to disialosyl Lea
US4925796A (en) 1986-03-07 1990-05-15 Massachusetts Institute Of Technology Method for enhancing glycoprotein stability
ES2058070T3 (en) 1986-05-09 1994-11-01 Pulverer Gerhard USE OF SPECIFIC MONOSACCHARIDES FOR THE PREPARATION OF A MEDICINAL PRODUCT TO PREVENT METASTASIS OF MALIGNANT TUMORS.
US5538724A (en) 1987-08-11 1996-07-23 The Board Of Trustees For The Leland Stanford Junior Univ. Method of control leukocyte extravasation
US5464778A (en) 1989-03-08 1995-11-07 Board Of Regents Of The University Of Oklahoma Glycoprotein ligand for P-selectin and methods of use thereof
US6033665A (en) 1989-09-27 2000-03-07 Elan Pharmaceuticals, Inc. Compositions and methods for modulating leukocyte adhesion to brain endothelial cells
US6280932B1 (en) 1990-06-11 2001-08-28 Gilead Sciences, Inc. High affinity nucleic acid ligands to lectins
US6001988A (en) 1990-06-11 1999-12-14 Nexstar Pharmaceuticals, Inc. High affinity nucleic acid ligands to lectins
US5576305A (en) 1990-06-15 1996-11-19 Cytel Corporation Intercellular adhesion mediators
US5753631A (en) 1990-06-15 1998-05-19 Cytel Corporation Intercellular adhesion mediators
US6387884B1 (en) 1990-06-18 2002-05-14 Stanford University Leukocyte homing modulation
US6391857B1 (en) 1990-06-18 2002-05-21 Stanford University Methods and compositions for endothelial binding
US5211937A (en) 1990-07-30 1993-05-18 Glycomed Incorporated Method of determining a site of inflammation utilizing elam-1 ligands
US5143712A (en) 1990-07-30 1992-09-01 Glycomed Incorporated Method of determining a site of inflammation utilizing elam-1 ligands
US5648344A (en) 1990-07-30 1997-07-15 Glycomed Incorporated Methods of treating inflammation using selection binding compounds
US5789573A (en) 1990-08-14 1998-08-04 Isis Pharmaceuticals, Inc. Antisense inhibition of ICAM-1, E-selectin, and CMV IE1/IE2
NZ240646A (en) 1990-11-23 1994-01-26 Gen Hospital Corp Therapeutic interference between cell adhesion proteins and their
US5151360A (en) 1990-12-31 1992-09-29 Biomembrane Institute Effect of n,n,n-trimethylsphingosine on protein kinase-c activity, melanoma cell growth in vitro, metastatic potential in vivo and human platelet aggregation
US6124267A (en) 1991-02-05 2000-09-26 Southpac Trust Internationals, Inc. O-glycan inhibitors of selectin mediated inflammation derived from PSGL-1
US6309639B1 (en) 1991-02-05 2001-10-30 The Board Of Regents Of The University Of Oklahoma Method for inhibiting an inflammatory response using antibodies to P-selectin glycoprotein ligand
US6121233A (en) 1991-04-19 2000-09-19 John L. Magnani Methods for the inhibition of cancer metastasis mediated by endothelial adhesion molecules
DK0584229T3 (en) 1991-05-06 2003-11-17 Genentech Inc Glycam-1 (Sgp 50), a selectin ligand
US5318890A (en) 1991-05-06 1994-06-07 The Regents Of The University Of California Assays for inhibitors of leukocyte adhesion
US5580858A (en) 1991-06-10 1996-12-03 Alberta Research Council Immunosuppressive and tolerogenic modified Lewisx compounds
US5352670A (en) 1991-06-10 1994-10-04 Alberta Research Council Methods for the enzymatic synthesis of alpha-sialylated oligosaccharide glycosides
US5646123A (en) 1991-06-10 1997-07-08 Alberta Research Council Time dependent administration of oligosaccharide glycosides related to blood group determinants having a type I or type II core structure in reducing inflammation in a sensitized mammal arising form exposure to an antigen
JPH07507040A (en) 1991-09-10 1995-08-03 セントコー,インコーポレイテッド Peptide inhibitors of selectin-mediated inflammation
US5268364A (en) 1991-12-12 1993-12-07 The Biomembrane Institute Method for inhibiting selectin-dependent adhesion of leukocytes and platelets by O-glycosylation modification
AU3914393A (en) 1991-12-18 1994-03-15 Board Of Regents Of The University Of Oklahoma, The Peptide inhibitors of inflammation mediated by selectins
US5591835A (en) 1992-06-29 1997-01-07 Glycomed Incorporated Substituted lactose derivatives
CA2100412A1 (en) 1992-07-15 1994-01-16 Yutaka Yamada Glycolipid derivatives
US5753617A (en) 1992-09-08 1998-05-19 Centocor, Inc. Peptide inhibitors of cellular adhesion
US5519008A (en) 1992-09-10 1996-05-21 Glycomed Incorporated Derivatives of triterpenoid acids as inhibitors of cell-adhesion molecules ELAM-1 (E-selectin) and LECAM-1 (L-selectin)
AU4859793A (en) 1992-09-11 1994-04-12 Regents Of The University Of California, The Sulfated ligands for l-selectins and use of chlorates and or sulfatases for the treatment of inflammation
US5695752A (en) 1992-09-11 1997-12-09 The Regents Of The University Of California Treating inflammation via the administration of specific sulfatase enzymes and/or sulfation inhibitor
US5843707A (en) 1992-10-23 1998-12-01 Genetics Institute, Inc. Nucleic acid encoding a novel P-selectin ligand protein
US6277975B1 (en) 1992-10-23 2001-08-21 Genetics Institute, Inc. Fusions of P-selectin ligand protein and polynucleotides encoding same
EP0601417A3 (en) 1992-12-11 1998-07-01 Hoechst Aktiengesellschaft Physiologically compatible and degradable polymer-based carbohydrate receptor blockers, a method for their preparation and their use
US5710123A (en) 1992-12-18 1998-01-20 Centocor, Inc. Peptide inhibitors of selectin binding
DK0695189T3 (en) 1992-12-29 1999-08-09 Genentech Inc Treatment of inflammatory bowel disease with IFN-gamma inhibitors
US5412123A (en) 1993-02-08 1995-05-02 Glycomed Incorporated Anthraquinone and anthracene derivatives as inhibitors of the cell-adhesion molecules of the immune system
JP2716657B2 (en) * 1993-02-26 1998-02-18 株式会社ディ・ディ・エス研究所 Compound having specific binding ability to adhesion molecule ELAM-1
CA2157489A1 (en) 1993-03-04 1994-09-15 Masaaki Numata Lewis-associated compound, process for producing the same, and anti-inflammatory
US5527890A (en) 1993-04-16 1996-06-18 Glycomed Incorporated Derivatives of triterpenoid acids and uses thereof
US5811404A (en) 1993-05-14 1998-09-22 Cytel Corporation Sialyl Lex analogues as inhibitors of cellular adhesion
US5854218A (en) 1993-05-14 1998-12-29 Cytel Corporation Sialyl Lex analogues as inhibitors of cellular adhesion
US5527785A (en) 1993-05-14 1996-06-18 The Regents Of The University Of California Selectin receptor modulating compositions
EP0698031A4 (en) 1993-05-14 1997-07-09 Cytel Corp SIALYL LE x ANALOGUES AS INHIBITORS OF CELLULAR ADHESION
DE69430253T2 (en) 1993-05-17 2002-11-14 Avant Immunotherapeutics Inc COMPLEMENT RELATED PROTEINS AND CARBOHYDRATES CONTAINING COMPOSITIONS AND METHODS FOR THE PRODUCTION AND USE OF THESE COMPOSITIONS
US5976540A (en) 1993-05-17 1999-11-02 T Cell Sciences, Inc. Compositions comprising complement related proteins and carbohydrates, and methods for producing and using said compositions
US5646248A (en) 1993-06-08 1997-07-08 La Jolla Cancer Research Foundation E-selection binding soluble lamp-1 polypeptide
US5837689A (en) 1993-06-16 1998-11-17 Glycomed Incorporated Sialyl lewis-x mimetics containing naphthyl backbones
US5789385A (en) 1993-06-16 1998-08-04 Glycomed Incorporated Sialyl Lewisx mimetics containing phenyl backbones
US5658880A (en) 1993-06-16 1997-08-19 Glycomed Incorporated Sialic acid/fucose based medicaments
US5750508A (en) 1993-06-16 1998-05-12 Glycomed Incorporated Sialic acid/fucose based medicaments
US5679321A (en) 1993-06-17 1997-10-21 Glycomed Incorporated Sialic acid/fucose based medicaments
US5559103A (en) 1993-07-21 1996-09-24 Cytel Corporation Bivalent sialyl X saccharides
US5508387A (en) 1993-08-04 1996-04-16 Glycomed Incorporated Selectin binding glycopeptides
WO1995005830A1 (en) 1993-08-20 1995-03-02 The Regents Of The University Of California Polyanion anti-inflammatory agents
US5464815A (en) 1993-09-08 1995-11-07 Genentech, Inc. Inhibition of heparin-binding
WO1995010296A1 (en) 1993-10-12 1995-04-20 Glycomed Incorporated A library of glyco-peptides useful for identification of cell adhesion inhibitors
US5783693A (en) 1993-11-19 1998-07-21 The Regents Of The University Of California Methods for synthesizing sulfated disaccharide inhibitors of selectins
WO1995014787A1 (en) 1993-11-22 1995-06-01 Centocor, Inc. Peptide inhibitors of selecting binding
US5663151A (en) 1994-03-04 1997-09-02 Bristol-Myers Squibb Company Sulfated α-glycolipid derivatives as cell adhesion inhibitors
DE4408248A1 (en) * 1994-03-11 1995-09-14 Hoechst Ag Physiologically acceptable and physiologically degradable carbohydrate mimetics, process for their preparation and their use
EP0671409A3 (en) 1994-03-11 1996-06-12 Hoechst Ag Malonic acid derivatives having anti-adhesive properties.
US5444050A (en) 1994-04-29 1995-08-22 Texas Biotechnology Corporation Binding of E-selectin or P-selectin to sialyl Lewisx or sialyl-Lewisa
HUT77345A (en) 1994-04-29 1998-03-30 Texas Biotechnology Corporation Mannopyranosyloxy biphenyl derivatives capable of inhibiting the binding of e-selectin,p-selectin or l-selectin to sialyl-lewis x or sialyl-lewis a and pharmaceutical compositions containing them
US5486536A (en) 1994-08-15 1996-01-23 The Regents Of The University Of Michigan Sulfatides as anti-inflammatory compounds
JPH0899989A (en) 1994-09-30 1996-04-16 Akira Hasegawa New glycolipid derivative and intermediate for its production
DE4436164A1 (en) 1994-10-10 1996-04-11 Hoechst Ag New conjugates of tetra:carbohydrate and amide-linked peptide or dye etc.
US5686426A (en) 1994-11-17 1997-11-11 Bristol-Myers Squibb Company Dicarboxymethylated glycolipid derivatives as cell adhesion inhibitors
US6492332B1 (en) 1995-12-12 2002-12-10 Omeros Corporation Irrigation solution and methods for inhibition of tumor cell adhesion, pain and inflammation
US5639734A (en) 1994-12-20 1997-06-17 Esko; Jeffrey D. Disaccharide inflammation inhibitors and uses thereof
US20020040008A1 (en) 1995-01-24 2002-04-04 Wagner Denisa D. Method for treating and preventing atherosclerosis
US5736533A (en) 1995-06-07 1998-04-07 Neose Technologies, Inc. Bacterial inhibition with an oligosaccharide compound
SI9620099A (en) * 1995-06-29 1998-08-31 Novartis Ag Diglycosylated 1,2-diols as mimetics of sialyl-lewis x and sialyl-lewis a
US5876715A (en) 1995-08-17 1999-03-02 The Biomembrane Institute Antibodies that bind novel carbohydrate ligands (myelorollins) that cause E-selectin dependent cell rolling, and uses thereof
DE19532902A1 (en) 1995-09-06 1997-03-13 Hoechst Ag Novel glycomimetics as selectin antagonists and anti-inflammatory drugs made from them
DE19537334A1 (en) 1995-10-09 1997-04-10 Hoechst Ag New piperidine carboxylic acid and pyrrolidine carboxylic acid derivs.
WO1997015585A1 (en) 1995-10-26 1997-05-01 Kanebo, Ltd. Fucose derivatives, drugs containing the same as active ingredient, and intermediates for producing the same
US5747463A (en) 1995-11-13 1998-05-05 Bristol-Myers Squibb Company Malonate derivatives of glycolipids as cell adhesion inhibitors
DE19602355A1 (en) 1996-01-24 1997-07-31 Hoechst Ag Multiple fucosylated dicarboxylic acids with anti-adhesive properties
WO1997028174A1 (en) 1996-01-30 1997-08-07 Novartis Ag SIALYL-LEWISa AND SIALYL-LEWISx EPITOPE ANALOGUES
DE69737496D1 (en) 1996-01-30 2007-05-03 Glycomimetics Inc SIALYL-LEWISa AND SIALYL LEWISx EPITOP ANALOGUE
US5710023A (en) 1996-03-01 1998-01-20 Genetics Institute, Inc. IL-13 cytokine receptor chain
DE69712754T2 (en) 1996-03-01 2002-10-17 Univ California INHIBITION OF SELECTINBINDING
US5654412A (en) 1996-05-29 1997-08-05 Glycomed Incorporated Processes for the synthesis of sialyl Lewisx compounds
US5994402A (en) 1996-06-05 1999-11-30 Rotstein; Ori D. Anti-inflammatory and anti-pyretic method
US5919768A (en) 1996-06-26 1999-07-06 Texas Biotechnology Corporation Di- and trivalent small molecule selectin inhibitors
US5830871A (en) 1996-10-28 1998-11-03 The Scripps Research Institute Inhibitors of E-, P- and L-selectin binding
GB9618520D0 (en) 1996-09-05 1996-10-16 Chiroscience Ltd Compounds and their therapeutic use
US6110897A (en) 1996-10-10 2000-08-29 Glycorex Ab Antiinflammatory cell adhesion inhibitors
AU733692B2 (en) 1997-02-28 2001-05-24 Regents Of The University Of California, The Inhibition of cell-cell binding by lipid assemblies
US6120751A (en) 1997-03-21 2000-09-19 Imarx Pharmaceutical Corp. Charged lipids and uses for the same
SE9701127D0 (en) 1997-03-26 1997-03-26 Karolinska Innovations Ab Antigenic fusion protein carrying GALal, 3GAL epitopes
US5916910A (en) 1997-06-04 1999-06-29 Medinox, Inc. Conjugates of dithiocarbamates with pharmacologically active agents and uses therefore
US6193973B1 (en) 1997-08-22 2001-02-27 B. David Tuttle Dietary supplement for boosting energy and increasing muscular strength
US5948628A (en) 1997-09-05 1999-09-07 The Board Of Regents Of The University Of Oklahoma Methods of screening for compounds which mimic galectin-1
WO1999043353A2 (en) 1998-02-26 1999-09-02 Boehringer Ingelheim Pharmaceuticals, Inc. Combination anti-selectin and immunosuppressant therapy
US6365365B1 (en) 1998-03-20 2002-04-02 The Regents Of The University Of California Method of determining whether an agent modulates glycosyl sulfotransferase-3
US6265192B1 (en) 1998-03-20 2001-07-24 The Regents Of The University Of California Glycosly sulfortransferase-3
US6037333A (en) 1998-05-07 2000-03-14 Trustees Of Tufts College Microbe-inhibiting compositions
DE69934890D1 (en) 1998-06-16 2007-03-08 Univ Oklahoma GLYCOSULFOPEPTIDES AND PROCESS FOR THEIR PRODUCTION AND THEIR USE
WO2000017216A1 (en) 1998-09-21 2000-03-30 Otsuka Pharmaceutical Co., Ltd. Carboxymethylgalactose derivatives
DE69941031D1 (en) 1998-11-12 2009-08-06 Novolytics Inc COMPOSITIONS AND METHOD FOR GENERATING VASCULAR OCCLUSION
DE60118362T2 (en) 2000-05-19 2007-05-24 The Center for Blood Research, Inc., Boston METHOD FOR TREATING HEMOSTATIC INTERFERENCE BY SOLUBLE P-SELECTIN
US20020132220A1 (en) 2000-12-27 2002-09-19 Berens Kurt L. Use of selectin antagonists in organ preservation solutions
US7087212B2 (en) 2001-08-17 2006-08-08 Mallinckrodt, Inc Multicomponent assemblies having enhanced binding properties for diagnosis and therapy
PT1934236E (en) * 2005-09-02 2012-12-26 Glycomimetics Inc Heterobifunctional pan-selectin inhibitors

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
None

Cited By (34)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9254322B2 (en) 2007-12-10 2016-02-09 The University Of Queensland Compositions comprising E-selectin antagonists and uses therefor
US9486497B2 (en) 2007-12-10 2016-11-08 The University Of Queensland Treatment of immunocompromised conditions
EP2915539A1 (en) 2007-12-10 2015-09-09 Mater Medical Research Institute Treatment of immunocompromised conditions with E-Selectin antagonist and G-CSF
JPWO2011040574A1 (en) * 2009-09-30 2013-02-28 国立大学法人京都大学 Method for producing azetidinylmethoxypyridine derivative and use thereof
WO2011040574A1 (en) * 2009-09-30 2011-04-07 国立大学法人京都大学 Method for producing azetidinylmethoxypyridine derivative and use of azetidinylmethoxypyridine derivative
WO2012037034A1 (en) 2010-09-14 2012-03-22 Glycomimetics, Inc. E-selectin antagonists
US9796745B2 (en) 2011-12-22 2017-10-24 Glycomimetics, Inc. E-selectin antagonist compounds, compositions, and methods of use
US9109002B2 (en) 2011-12-22 2015-08-18 Glycomimetics, Inc. E-selectin antagonist compounds, compositions, and methods of use
US11332491B2 (en) 2011-12-22 2022-05-17 Glycomimetics, Inc. E-selectin antagonist compounds, compositions, and methods of use
US10766916B2 (en) 2011-12-22 2020-09-08 Glycomimetics, Inc. E-selectin antagonist compounds, compositions, and methods of use
US10526361B2 (en) 2011-12-22 2020-01-07 Glycomimetics, Inc. E-selectin antagonist compounds, compositions, and methods of use
US9867841B2 (en) 2012-12-07 2018-01-16 Glycomimetics, Inc. Compounds, compositions and methods using E-selectin antagonists for mobilization of hematopoietic cells
WO2015109049A1 (en) * 2014-01-17 2015-07-23 Glycomimetics, Inc. E-selectin antagonists modified by macrocycle formation to the galactose
US10519181B2 (en) 2014-12-03 2019-12-31 Glycomimetics, Inc. Heterobifunctional inhibitors of E-selectins and CXCR4 chemokine receptors
WO2017127422A1 (en) 2016-01-22 2017-07-27 Glycomimetics, Inc. Glycomimetic inhibitors of pa-il and pa-iil lectins
US11045485B2 (en) * 2016-01-22 2021-06-29 Glycomimetics, Inc. Glycomimetic inhibitors of PA-IL and PA-IIL lectins
US11291678B2 (en) 2016-03-02 2022-04-05 Glycomimetics, Inc Methods for the treatment and/or prevention of cardiovascular disease by inhibition of E-selectin
US11433086B2 (en) 2016-08-08 2022-09-06 Glycomimetics, Inc. Combination of T-cell checkpoint inhibitors with inhibitors of e-selectin or CXCR4, or with heterobifunctional inhibitors of both E-selectin and CXCR4
US11072625B2 (en) 2016-10-07 2021-07-27 Glycomimetics, Inc. Highly potent multimeric e-selectin antagonists
AU2017341065B2 (en) * 2016-10-07 2023-04-06 Glycomimetics, Inc. Highly potent multimeric E-selectin antagonists
KR102653723B1 (en) 2016-10-07 2024-04-01 글리코미메틱스, 인크. Highly potent multimeric e-selectin antagonists
KR20230164235A (en) * 2016-10-07 2023-12-01 글리코미메틱스, 인크. Highly potent multimeric e-selectin antagonists
WO2018068010A1 (en) * 2016-10-07 2018-04-12 Glycomimetics, Inc. Highly potent multimeric e-selectin antagonists
KR20190062509A (en) * 2016-10-07 2019-06-05 글리코미메틱스, 인크. Very potent mass-selective E-selectin antagonist
KR102607640B1 (en) 2016-10-07 2023-11-28 글리코미메틱스, 인크. Very potent multimeric E-selectin antagonist
CN109890421A (en) * 2016-10-07 2019-06-14 糖模拟物有限公司 Efficient polymer e-selectin antagonist
CN109890421B (en) * 2016-10-07 2023-10-20 糖模拟物有限公司 High potency multimeric E-selectin antagonists
US11780873B2 (en) 2016-10-07 2023-10-10 Glycomimetics, Inc. Highly potent multimeric e-selectin antagonists
WO2018169853A1 (en) * 2017-03-15 2018-09-20 Glycomimetics, Inc. Galactopyranosyl-cyclohexyl derivatives as e-selectin antagonists
US11878026B2 (en) 2017-03-15 2024-01-23 Glycomimetics, Inc. Galactopyranosyl-cyclohexyl derivatives as e-selectin antagonists
US11197877B2 (en) 2017-03-15 2021-12-14 Glycomimetics. Inc. Galactopyranosyl-cyclohexyl derivauves as E-selectin antagonists
US11712446B2 (en) 2017-11-30 2023-08-01 Glycomimetics, Inc. Methods of mobilizing marrow infiltrating lymphocytes and uses thereof
US11548908B2 (en) 2017-12-29 2023-01-10 Glycomimetics, Inc. Heterobifunctional inhibitors of E-selectin and galectin-3
US11707474B2 (en) 2018-03-05 2023-07-25 Glycomimetics, Inc. Methods for treating acute myeloid leukemia and related conditions

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