WO2010006303A3 - Methods and apparatus related to management of experiments - Google Patents

Methods and apparatus related to management of experiments Download PDF

Info

Publication number
WO2010006303A3
WO2010006303A3 PCT/US2009/050307 US2009050307W WO2010006303A3 WO 2010006303 A3 WO2010006303 A3 WO 2010006303A3 US 2009050307 W US2009050307 W US 2009050307W WO 2010006303 A3 WO2010006303 A3 WO 2010006303A3
Authority
WO
WIPO (PCT)
Prior art keywords
sample
test site
parameter value
value associated
rule
Prior art date
Application number
PCT/US2009/050307
Other languages
French (fr)
Other versions
WO2010006303A2 (en
Inventor
Santosh K. Putta
Original Assignee
Nodality, Inc.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Nodality, Inc. filed Critical Nodality, Inc.
Priority to GB1102311A priority Critical patent/GB2474613A/en
Publication of WO2010006303A2 publication Critical patent/WO2010006303A2/en
Publication of WO2010006303A3 publication Critical patent/WO2010006303A3/en

Links

Classifications

    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N35/00—Automatic analysis not limited to methods or materials provided for in any single one of groups G01N1/00 - G01N33/00; Handling materials therefor
    • G01N35/00584—Control arrangements for automatic analysers
    • G01N35/00594—Quality control, including calibration or testing of components of the analyser
    • G01N35/00613—Quality control
    • G01N35/00663—Quality control of consumables
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N15/00—Investigating characteristics of particles; Investigating permeability, pore-volume, or surface-area of porous materials
    • G01N15/10—Investigating individual particles
    • G01N15/14—Electro-optical investigation, e.g. flow cytometers
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N15/00—Investigating characteristics of particles; Investigating permeability, pore-volume, or surface-area of porous materials
    • G01N15/10—Investigating individual particles
    • G01N15/14—Electro-optical investigation, e.g. flow cytometers
    • G01N15/1404—Fluid conditioning in flow cytometers, e.g. flow cells; Supply; Control of flow
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N35/00—Automatic analysis not limited to methods or materials provided for in any single one of groups G01N1/00 - G01N33/00; Handling materials therefor
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N35/00—Automatic analysis not limited to methods or materials provided for in any single one of groups G01N1/00 - G01N33/00; Handling materials therefor
    • G01N35/00584—Control arrangements for automatic analysers
    • G01N35/00594—Quality control, including calibration or testing of components of the analyser
    • G01N35/00712—Automatic status testing, e.g. at start-up or periodic

Abstract

In one embodiment, a method includes sending an indicator of an availability of a sample from a sample pool stored in a physical inventory. The sample is included in the sample pool based on an attribute of the sample satisfying a condition associated with the sample pool. An indicator that the sample has been selected from the sample pool for analysis at a first test site included in an array of test sites is received. A rule is retrieved from a rule database based on an experimental parameter value associated with the first test site. At least one of the experimental parameter value associated with the first test site or an experimental parameter value associated with a second test site is modified based on a condition within the rule being satisfied.
PCT/US2009/050307 2008-07-10 2009-07-10 Methods and apparatus related to management of experiments WO2010006303A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
GB1102311A GB2474613A (en) 2008-07-10 2009-07-10 Methods and apparatus related to management of experiments

Applications Claiming Priority (8)

Application Number Priority Date Filing Date Title
US7953708P 2008-07-10 2008-07-10
US7955108P 2008-07-10 2008-07-10
US61/079,551 2008-07-10
US61/079,537 2008-07-10
US8755508P 2008-08-08 2008-08-08
US61/087,555 2008-08-08
US15362709P 2009-02-18 2009-02-18
US61/153,627 2009-02-18

Publications (2)

Publication Number Publication Date
WO2010006303A2 WO2010006303A2 (en) 2010-01-14
WO2010006303A3 true WO2010006303A3 (en) 2010-04-22

Family

ID=41202674

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2009/050307 WO2010006303A2 (en) 2008-07-10 2009-07-10 Methods and apparatus related to management of experiments

Country Status (3)

Country Link
US (2) US20100042351A1 (en)
GB (1) GB2474613A (en)
WO (1) WO2010006303A2 (en)

Families Citing this family (48)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7381535B2 (en) * 2002-07-10 2008-06-03 The Board Of Trustees Of The Leland Stanford Junior Methods and compositions for detecting receptor-ligand interactions in single cells
AU2002365421A1 (en) 2001-07-10 2003-09-02 The Board Of Trustees Of The Leland Stanford Junior University Methods and compositions for detecting the activation state of the multiple proteins in single cells
US7393656B2 (en) * 2001-07-10 2008-07-01 The Board Of Trustees Of The Leland Stanford Junior University Methods and compositions for risk stratification
US20070009923A1 (en) * 2005-01-24 2007-01-11 Massachusetts Institute Of Technology Use of bayesian networks for modeling cell signaling systems
EP2860247A1 (en) 2007-08-21 2015-04-15 Nodality, Inc. Methods for diagnosis, prognosis and methods of treatment
WO2009134944A2 (en) * 2008-04-29 2009-11-05 Nodality, Inc. Methods of determining the health status of an individual
US20090269800A1 (en) * 2008-04-29 2009-10-29 Todd Covey Device and method for processing cell samples
US9183237B2 (en) 2008-07-10 2015-11-10 Nodality, Inc. Methods and apparatus related to gate boundaries within a data space
US8399206B2 (en) 2008-07-10 2013-03-19 Nodality, Inc. Methods for diagnosis, prognosis and methods of treatment
WO2010006291A1 (en) * 2008-07-10 2010-01-14 Nodality, Inc. Methods for diagnosis, prognosis and treatment
US20100030719A1 (en) * 2008-07-10 2010-02-04 Covey Todd M Methods and apparatus related to bioinformatics data analysis
US20100014741A1 (en) * 2008-07-10 2010-01-21 Banville Steven C Methods and apparatus related to gate boundaries within a data space
JP5123111B2 (en) * 2008-09-03 2013-01-16 株式会社東芝 Automatic analyzer
US20100099109A1 (en) * 2008-10-17 2010-04-22 Nodality, Inc., A Delaware Corporation Methods for Analyzing Drug Response
US9034257B2 (en) 2008-10-27 2015-05-19 Nodality, Inc. High throughput flow cytometry system and method
US8309306B2 (en) * 2008-11-12 2012-11-13 Nodality, Inc. Detection composition
US20100209929A1 (en) * 2009-01-14 2010-08-19 Nodality, Inc., A Delaware Corporation Multiple mechanisms for modulation of jak/stat activity
US20100204973A1 (en) * 2009-01-15 2010-08-12 Nodality, Inc., A Delaware Corporation Methods For Diagnosis, Prognosis And Treatment
US20100233733A1 (en) * 2009-02-10 2010-09-16 Nodality, Inc., A Delaware Corporation Multiple mechanisms for modulation of the pi3 kinase pathway
US20100215644A1 (en) * 2009-02-25 2010-08-26 Nodality, Inc. A Delaware Corporation Analysis of nodes in cellular pathways
US8242248B2 (en) * 2009-03-23 2012-08-14 Nodality, Inc. Kits for multiparametric phospho analysis
US20100297676A1 (en) * 2009-05-20 2010-11-25 Nodality, Inc. Methods for diagnosis, prognosis and methods of treatment
EP2476053A4 (en) * 2009-09-08 2014-03-12 Nodality Inc Analysis of cell networks
US9459246B2 (en) 2009-09-08 2016-10-04 Nodality, Inc. Induced intercellular communication
EP2299277B1 (en) * 2009-09-17 2015-10-21 F. Hoffmann-La Roche AG Analysis system for analysing biological samples, methods and computer program product
CA2842377C (en) * 2011-07-19 2019-08-27 Ovizio Imaging Systems N.V. A method and system for detecting and/or classifying cancerous cells in a cell sample
US9443710B2 (en) 2011-09-16 2016-09-13 Waters Technologies Corporation Techniques for automated performance maintenance testing and reporting for analytical instruments
US9396915B2 (en) * 2011-12-12 2016-07-19 Waters Technologies Corporation Techniques for automated installation testing and reporting for analytical instruments
US10930375B2 (en) 2011-12-30 2021-02-23 Cerner Innovation, Inc. Facilitating modifying reference laboratories
US10970677B2 (en) * 2011-12-30 2021-04-06 Cerner Innovation, Inc. Managing updates from reference laboratories
US9476871B2 (en) 2012-05-02 2016-10-25 Diatech Oncology Llc System and method for automated determination of the relative effectiveness of anti-cancer drug candidates
US9519463B1 (en) * 2012-11-15 2016-12-13 Advanced Testing Technologies Inc. Application for automatically generating graphical flowcharts based on configurable means
US8996837B1 (en) * 2013-03-15 2015-03-31 Emc Corporation Providing multi-tenancy within a data storage apparatus
JP6171728B2 (en) * 2013-08-26 2017-08-02 ウシオ電機株式会社 Reagent kit and measurement software server
CN103645982B (en) * 2013-11-29 2017-11-14 北京奇虎科技有限公司 Log processing method and client
WO2015160420A1 (en) 2014-04-14 2015-10-22 Becton, Dickinson And Company Reagent calibration system and method
WO2015192010A1 (en) * 2014-06-13 2015-12-17 Wafergen, Inc. Systems for single or multiple cell counting and dispensing
US10616219B2 (en) 2014-12-11 2020-04-07 FlowJo, LLC Single cell data management and analysis systems and methods
US10438120B2 (en) 2015-05-08 2019-10-08 FlowJo, LLC Plugin interface and framework for integrating external algorithms with sample data analysis software
WO2016196220A1 (en) * 2015-05-29 2016-12-08 Beckman Coulter, Inc. System and method for defining and utilizing flow cytometry protocols
WO2017041016A1 (en) * 2015-09-03 2017-03-09 Becton, Dickinson And Company Methods and systems for providing labelled biomolecules
WO2017069738A1 (en) * 2015-10-20 2017-04-27 Hewlett-Packard Development Company, L.P. Patterned layer deposition
US9973503B2 (en) * 2015-12-15 2018-05-15 Foundation of the Idiap Research Institute (IDIAP) Method and internet-connected server for reviewing a computer-executable experiment
CN110326052A (en) * 2017-02-16 2019-10-11 贝克顿·迪金森公司 For providing the method and system of the biomolecule with epitope tag
WO2018217933A1 (en) 2017-05-25 2018-11-29 FlowJo, LLC Visualization, comparative analysis, and automated difference detection for large multi-parameter data sets
US11029242B2 (en) * 2017-06-12 2021-06-08 Becton, Dickinson And Company Index sorting systems and methods
CN110457309A (en) * 2019-07-01 2019-11-15 北京科技大学 A kind of database for metal material characterization parameter
US11887114B2 (en) * 2020-04-03 2024-01-30 Nbcuniversal Media, Llc Systems and methods for pulsing content

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5314825A (en) * 1992-07-16 1994-05-24 Schiapparelli Biosystems, Inc. Chemical analyzer
US5358691A (en) * 1992-03-27 1994-10-25 Abbott Laboratories Automated continuous and random access analytical system
US5812419A (en) * 1994-08-01 1998-09-22 Abbott Laboratories Fully automated analysis method with optical system for blood cell analyzer
US6387328B1 (en) * 1997-07-01 2002-05-14 Boule Medical Ab Disposable sampling device for particle counting apparatus

Family Cites Families (55)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4700294A (en) * 1982-10-15 1987-10-13 Becton Dickinson And Company Data storage system having means for compressing input data from sets of correlated parameters
US5122453A (en) * 1984-03-28 1992-06-16 Technicon Instruments Corporation Method for discriminating surface stained lymphocytes
US4845653A (en) * 1987-05-07 1989-07-04 Becton, Dickinson And Company Method of displaying multi-parameter data sets to aid in the analysis of data characteristics
US4987539A (en) * 1987-08-05 1991-01-22 Stanford University Apparatus and method for multidimensional characterization of objects in real time
US5079005A (en) * 1988-06-17 1992-01-07 Gupta Kashmiri L Time release protein
US5023080A (en) * 1988-06-17 1991-06-11 Basic Bio Systems, Inc. Time release protein
DE69028402T2 (en) * 1989-05-22 1997-04-17 Hoffmann La Roche METHOD FOR MARKING AND DETECTING SUBSTANCES WITH NUCLEIC ACIDS
US5224058A (en) * 1990-05-01 1993-06-29 Becton, Dickinson And Company Method for data transformation
US5627040A (en) * 1991-08-28 1997-05-06 Becton Dickinson And Company Flow cytometric method for autoclustering cells
US5739000A (en) * 1991-08-28 1998-04-14 Becton Dickinson And Company Algorithmic engine for automated N-dimensional subset analysis
US5422277A (en) * 1992-03-27 1995-06-06 Ortho Diagnostic Systems Inc. Cell fixative composition and method of staining cells without destroying the cell surface
JPH05288754A (en) * 1992-04-10 1993-11-02 B M L:Kk Automatic sampling/distributing method and system of specimen and display method of specimen
US6287850B1 (en) * 1995-06-07 2001-09-11 Affymetrix, Inc. Bioarray chip reaction apparatus and its manufacture
US6121048A (en) * 1994-10-18 2000-09-19 Zaffaroni; Alejandro C. Method of conducting a plurality of reactions
US5856174A (en) * 1995-06-29 1999-01-05 Affymetrix, Inc. Integrated nucleic acid diagnostic device
US6004572A (en) * 1996-01-25 1999-12-21 Triangle Laboratories, Inc. Time release delivery system
US6014904A (en) * 1996-05-09 2000-01-18 Becton, Dickinson And Company Method for classifying multi-parameter data
US6178382B1 (en) * 1998-06-23 2001-01-23 The Board Of Trustees Of The Leland Stanford Junior University Methods for analysis of large sets of multiparameter data
FR2782730B1 (en) * 1998-08-25 2002-05-17 Biocom Sa CELL SEPARATION PROCESS FOR THE ISOLATION OF PATHOGENIC CELLS, PARTICULARLY RARE CANCERES, EQUIPMENT AND REAGENT FOR IMPLEMENTING THE PROCESS AND APPLICATION OF THE PROCESS
US6890487B1 (en) * 1999-09-30 2005-05-10 Science & Technology Corporation ©UNM Flow cytometry for high throughput screening
US7555492B2 (en) * 1999-11-05 2009-06-30 The Board Of Trustees At The Leland Stanford Junior University System and method for internet-accessible tools and knowledge base for protocol design, metadata capture and laboratory experiment management
US6947953B2 (en) * 1999-11-05 2005-09-20 The Board Of Trustees Of The Leland Stanford Junior University Internet-linked system for directory protocol based data storage, retrieval and analysis
US20030097222A1 (en) * 2000-01-25 2003-05-22 Craford David M. Method, system, and computer software for providing a genomic web portal
JP2003524183A (en) * 2000-02-23 2003-08-12 カリパー・テクノロジーズ・コープ． Multi-reservoir pressure control system
US6520618B2 (en) * 2000-02-24 2003-02-18 Canon Kabushiki Kaisha Pump, device for recovering liquid ejection and image forming apparatus equipped with the pump
EP2565826B1 (en) * 2000-05-11 2019-11-06 Becton Dickinson and Company System for indentifying clusters in scatter plots using smoothed polygons with optimal boundaries
CA2415055A1 (en) * 2000-08-03 2002-02-14 Caliper Technologies Corporation Methods and devices for high throughput fluid delivery
ATE432466T1 (en) * 2000-10-31 2009-06-15 Caliper Life Sciences Inc MICROFLUIDIC PROCESS FOR IN-SITU MATERIAL CONCENTRATION
US7381535B2 (en) * 2002-07-10 2008-06-03 The Board Of Trustees Of The Leland Stanford Junior Methods and compositions for detecting receptor-ligand interactions in single cells
US7393656B2 (en) * 2001-07-10 2008-07-01 The Board Of Trustees Of The Leland Stanford Junior University Methods and compositions for risk stratification
US7695926B2 (en) * 2001-07-10 2010-04-13 The Board Of Trustees Of The Leland Stanford Junior University Methods and compositions for detecting receptor-ligand interactions in single cells
AU2002365421A1 (en) * 2001-07-10 2003-09-02 The Board Of Trustees Of The Leland Stanford Junior University Methods and compositions for detecting the activation state of the multiple proteins in single cells
US20040220897A1 (en) * 2001-07-19 2004-11-04 Affymetrix, Inc. System, method, and computer software product for instrument control and data acquisition, analysis, management and storage
US20030078703A1 (en) * 2001-10-19 2003-04-24 Surromed, Inc. Cytometry analysis system and method using database-driven network of cytometers
ES2375724T3 (en) * 2002-09-27 2012-03-05 The General Hospital Corporation MICROFLUDE DEVICE FOR SEPERATION OF CELLS AND ITS USES.
US20060015291A1 (en) * 2002-10-18 2006-01-19 Leland Stanford Junior University Methods and systems for data analysis
US6954722B2 (en) * 2002-10-18 2005-10-11 Leland Stanford Junior University Methods and systems for data analysis
US7326577B2 (en) * 2003-10-20 2008-02-05 Esoterix, Inc. Cell fixation and use in phospho-proteome screening
PT1771729E (en) * 2004-07-27 2015-12-31 Beckman Coulter Inc Enhancing flow cytometry discrimination with geometric transformation
US20060141549A1 (en) * 2004-08-03 2006-06-29 Sudipta Mahajan Cell-based kinase assay
US20070009923A1 (en) * 2005-01-24 2007-01-11 Massachusetts Institute Of Technology Use of bayesian networks for modeling cell signaling systems
CA2600934A1 (en) * 2005-03-07 2006-09-14 Novx Systems Inc. Automated analyzer
US7734557B2 (en) * 2005-04-05 2010-06-08 The Board Of Trustees Of Leland Stanford Junior University Methods, software, and systems for knowledge base coordination
US7321843B2 (en) * 2005-09-30 2008-01-22 Universidad De Salamanca Method for generating new flow cytometry data files containing an infinite number of dimensions based on data estimation
US7299135B2 (en) * 2005-11-10 2007-11-20 Idexx Laboratories, Inc. Methods for identifying discrete populations (e.g., clusters) of data within a flow cytometer multi-dimensional data set
US10235429B2 (en) * 2007-08-20 2019-03-19 Stephen W. Meehan System and method for organizing data in a dynamic user-customizable interface for search and display
EP2247835A1 (en) * 2008-01-03 2010-11-10 Mack Trucks, Inc. Exhaust gas recirculation cooling circuit
CN101981446B (en) * 2008-02-08 2016-03-09 医疗探索公司 For the method and system using support vector machine to analyze flow cytometry data
US8548950B2 (en) * 2008-05-22 2013-10-01 The Board Of Trustees Of The Leland Stanford Junior University Method and system for data archiving
US20100030719A1 (en) * 2008-07-10 2010-02-04 Covey Todd M Methods and apparatus related to bioinformatics data analysis
US20100014741A1 (en) * 2008-07-10 2010-01-21 Banville Steven C Methods and apparatus related to gate boundaries within a data space
US8214323B2 (en) * 2008-09-16 2012-07-03 Beckman Coulter, Inc. Extensible data warehouse for flow cytometry data
US20100070502A1 (en) * 2008-09-16 2010-03-18 Beckman Coulter, Inc. Collision Free Hash Table for Classifying Data
WO2010033383A1 (en) * 2008-09-16 2010-03-25 Beckman Coulter, Inc. Interactive tree plot for flow cytometry data
US9464978B2 (en) * 2009-03-04 2016-10-11 Beckman Coulter, Inc. Cross-instrument method and system for cell population discrimination

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5358691A (en) * 1992-03-27 1994-10-25 Abbott Laboratories Automated continuous and random access analytical system
US5314825A (en) * 1992-07-16 1994-05-24 Schiapparelli Biosystems, Inc. Chemical analyzer
US5812419A (en) * 1994-08-01 1998-09-22 Abbott Laboratories Fully automated analysis method with optical system for blood cell analyzer
US6387328B1 (en) * 1997-07-01 2002-05-14 Boule Medical Ab Disposable sampling device for particle counting apparatus

Also Published As

Publication number Publication date
US20120215481A1 (en) 2012-08-23
WO2010006303A2 (en) 2010-01-14
GB2474613A (en) 2011-04-20
GB201102311D0 (en) 2011-03-23
US20100042351A1 (en) 2010-02-18

Similar Documents

Publication Publication Date Title
WO2010006303A3 (en) Methods and apparatus related to management of experiments
EP2413259A3 (en) Methods and systems for test automation of forms in web applications
WO2012151585A3 (en) Method and system for analyzing a task trajectory
WO2007126996A3 (en) System and methods for enhanced metadata entry
WO2008042461A3 (en) Systems and methods for storing and searching data in a customer center environment
WO2014105357A3 (en) Systems and methods for data entry in a non-destructive testing system
JP2009087342A5 (en)
WO2011035095A3 (en) Systems and methods for providing advanced search result page content
WO2010132624A3 (en) Method and system for analyzing ordered data using pattern matching in a relational database
WO2013043958A3 (en) Methods and systems to share media
WO2009098575A3 (en) Method and device for improved user input accuracy
WO2008155188A3 (en) Firewall control using remote system information
EP2355093A3 (en) Multi-dimensional disambiguation of voice commands
WO2007041351A3 (en) Actively characterizing a network
WO2012083303A3 (en) Automated fault analysis and response system
WO2014137984A3 (en) Reliable content recommendations
EP2541445A3 (en) A method and a system for analysing impact of changes to content of a website
WO2011001260A3 (en) Method and apparatus for providing content and context analysis of remote device content
WO2014137820A3 (en) Systems and methods for associating microposts with geographic locations
WO2012143896A3 (en) Method and apparatus for processing probe data
WO2012135199A3 (en) System and method for producing statistically valid assay means and ranges for quality control materials
EP2012116A4 (en) Individual discrimination method and apparatus
JP2015072644A5 (en)
WO2008139301A3 (en) Method, apparatus and computer program product for providing an adaptive framework for a metadata-context switch
WO2010027899A3 (en) Method, computer program product, and apparatus for enabling access to enterprise information

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 09790302

Country of ref document: EP

Kind code of ref document: A2

NENP Non-entry into the national phase

Ref country code: DE

ENP Entry into the national phase

Ref document number: 1102311

Country of ref document: GB

Kind code of ref document: A

Free format text: PCT FILING DATE = 20090710

WWE Wipo information: entry into national phase

Ref document number: 1102311.6

Country of ref document: GB

32PN Ep: public notification in the ep bulletin as address of the adressee cannot be established

Free format text: NOTING OF LOSS OF RIGHTS PURSUANT TO RULE 112(1) EPC (EPO FORM 1205A DATED 24/04/2011)

122 Ep: pct application non-entry in european phase

Ref document number: 09790302

Country of ref document: EP

Kind code of ref document: A2